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The map label for this gene is hifC [H]

Identifier: 194737801

GI number: 194737801

Start: 393805

End: 396366

Strand: Reverse

Name: hifC [H]

Synonym: SeSA_A0391

Alternate gene names: 194737801

Gene position: 396366-393805 (Counterclockwise)

Preceding gene: 194734525

Following gene: 194738316

Centisome position: 8.42

GC content: 53.86

Gene sequence:

>2562_bases
ATGTCCCCCACCATTAATTTGAACCGCAAAAGCCTTGCGCTATTGATCGCCATAGTTTGCTCAGGCTCCGCGCAGGGTGA
AGAGTATTATTTTGATCCTGCGCTACTTCAGGGGGCCACTTACGGACAAAATATTGCCCGTTTTAATGAACAGCAAACGC
CTTCCGGAGACTATCTTGCCGACGTTTACGTTAATGGCACGCTGGTAACAGCGAGCACTAATATTCGATTTGATGCTGTA
AAAGAGGGTCAACAGACGGAACCCTGCCTGCCCTTATCGGTGATGAAAGCGGCACAGATAAAATCACTTCCCGCGACCGA
CGCTGCGACCGAGTGTCGCCCGCTCAGGGAGTGGGTACCTCATGCCGGTTGGCAATTTGATAGCGCCACGCTTCGCCTGT
TGCTGACGATTCCAATGACCGAACTTACGCACAAACCGCGCGGTTATATCTCCCCTTCAGAGTGGGATAGCGGCGCGCTG
GCGCTGTTTTTACGCCATAACACAAACTGGACCCACACCGAAAATACCGACAGCCATTATCGCTACCAATACTTATGGAG
CGGTTTAAACATGGGCGTTAACCTCGGACTTTGGCAGGTCCGTCATCAAAGTAATCTGCGCTATGCCAATAGCAACCAGA
GCGGAAGCGCCTGGCGCTATAATAGCGTTCGAACCTGGGTGCAAAGACCTGTCGCGTCTATTAACAGTATTCTGTCGCTG
GGCGATAGCTATACGGACTCCAGCTTATTCGGCAGTCTGTCTTTTAACGGAGCTAAACTTGTCACCGACGAGCGGATGCG
CCCGCAGGGCAAACGCGGTTATGCGCCGGAAGTTCGGGGCGTAGCGGCCAGTAGCGCGCACGTGGTAGTAAAACAACTGG
GGAAAGTGATTTATGAAACCAACGTTCCGCCGGGCCCATTTTATATTGACGATCTGTACAACACCCGTTATCAAGGCGAT
CTGGAGGTAGAGGTTATCGAGGCCAGCGGTAAAACCTCACGTTTCACCGTGCCTTATTCTTCCGTGCCGGATTCGGTTCG
CCCCGGTAACTGGCACTATTCGCTGGCCTTCGGCAGGGTTCGTCAGTACTACGATATTGAAAATCGTTTCTTTGAGGGAA
CGTTCCAGCACGGCGTTAATAACACCATTACCCTCAACCTCGGTTCACGAATTGCGCAGCGTTACCAGGCATGGCTGGCG
GGCGGTGTCTGGGCCACCGATATGGGCGCGTTCGGCCTTAACGCCACCTGGTCGAATGCGCGCGCAGAGCATAATGATCG
CCAGCAAGGCTGGCGCGCGGAACTCAGTTACAGCAAAACGTTTACCACCGGCACTAACCTGGTACTGGCGGCTTATCGTT
ATTCAACCAACGGCTTTCGCGATCTTCAGGACGTGCTCGGCGTACGCCGGGAAGCAAAAACGGGGATTGATTACTACTCC
GACACGCTGCATCAGCGCAATCGCCTGTCCGCGACGGTAAGCCAGCCGTTAGGACGGCTTGGCACGCTTAACCTCAGCGC
CAGCACCGCAGACTACTACAATAACCAATCGCGTATAACACAGCTACAAATGGGGTATAGCAACCAGTGGCGGAATATAA
GCTACGGGGTGAATATCGCACGACAGCGCACCACCTGGGATTACGATCGCTTTTATCACGGCGTTAACGAACCACTGGAC
GTGAGTAGCCGACAAAAATATACCGAAACCACAATGTCGTTTAATGTCTCTATACCGCTGGATTGGGGCGAAAACAGAAC
GTCTGTCGCCATGAATTATAACCAGTCCAGTCAAAGCCGTTCCTCAACCATATCCATGACCGGCAGTAGCGGTGAAAACA
GCGACCTGTCATGGTCGGTTTATGGCGGCTACGAGCGTTATCGCAATAGTAATAGCGATAGCAGCGCGCCAACGACGTTT
GGCGGTAATCTACAACAGAACACCCGGTTTGGCGCACTTCGCGCCAACTATGACCAGGGTGATAACTATCGTCAGGAAGG
GCTGGGCGCGTCCGGCACCCTGGTACTTCACTCTGGAGGTCTGACGGCTGGCCCCTATACCAGCGATACCTTTGCGCTTA
TTCATGCCGATGGCGCGCAGGGCGCGATCGTACAAAATGGCCAGGGCGCTGTGGTTGATCGCTTTGGTTACGCCATTCTG
CCTTCGTTATCTCCTTACCGCGTCAATAACGTTACGCTCGATACCCGTAAGATGCGCAGCGATGCCGAACTGACGGGAGG
AAGTCAGCAGATTGTGCCCTATGCTGGCGCCATCGCGCGTGTCAATTTCGCCACTATCAGCGGCAAAGCGGTGCTGATCT
CCGTGAAGATGCCGGATGGCGGCATACCGCCAATGGGCGCTGATGTTTTCAACGGTGAAGGCACAAACATCGGCATGGTC
GGCCAGAGTGGGCAGATTTATGCCCGTATCGCCCATCCGTCGGGTTCTCTACTGGTGCGCTGGGGAACAGGGGCAAACCA
GCGTTGCCGGGTTGCCTACCAACTCGATCTTCACACCAAAGAACCGTTTCTCTATCTGAACAAAATCTGCGAGAAGGAAT
AG

Upstream 100 bases:

>100_bases
ACCTGGTGGCTGCCGGGCAAACGGTCACTCAAATCCTTCTCCGGTACAGTCACCGTTACTTTGGTTAACGACCTGGGCGC
AAGGATAAGCGAGAGCTACG

Downstream 100 bases:

>100_bases
CACAATGCTTTTTAGTTTCCGAACGCTATTGTTTATCACCAGCCTGTTCGTCAGCGCCGGAACATGGTCGTCATGTATCA
AAGTCACCAATAAGAGCGCG

Product: outer membrane fimbrial usher protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 853; Mature: 852

Protein sequence:

>853_residues
MSPTINLNRKSLALLIAIVCSGSAQGEEYYFDPALLQGATYGQNIARFNEQQTPSGDYLADVYVNGTLVTASTNIRFDAV
KEGQQTEPCLPLSVMKAAQIKSLPATDAATECRPLREWVPHAGWQFDSATLRLLLTIPMTELTHKPRGYISPSEWDSGAL
ALFLRHNTNWTHTENTDSHYRYQYLWSGLNMGVNLGLWQVRHQSNLRYANSNQSGSAWRYNSVRTWVQRPVASINSILSL
GDSYTDSSLFGSLSFNGAKLVTDERMRPQGKRGYAPEVRGVAASSAHVVVKQLGKVIYETNVPPGPFYIDDLYNTRYQGD
LEVEVIEASGKTSRFTVPYSSVPDSVRPGNWHYSLAFGRVRQYYDIENRFFEGTFQHGVNNTITLNLGSRIAQRYQAWLA
GGVWATDMGAFGLNATWSNARAEHNDRQQGWRAELSYSKTFTTGTNLVLAAYRYSTNGFRDLQDVLGVRREAKTGIDYYS
DTLHQRNRLSATVSQPLGRLGTLNLSASTADYYNNQSRITQLQMGYSNQWRNISYGVNIARQRTTWDYDRFYHGVNEPLD
VSSRQKYTETTMSFNVSIPLDWGENRTSVAMNYNQSSQSRSSTISMTGSSGENSDLSWSVYGGYERYRNSNSDSSAPTTF
GGNLQQNTRFGALRANYDQGDNYRQEGLGASGTLVLHSGGLTAGPYTSDTFALIHADGAQGAIVQNGQGAVVDRFGYAIL
PSLSPYRVNNVTLDTRKMRSDAELTGGSQQIVPYAGAIARVNFATISGKAVLISVKMPDGGIPPMGADVFNGEGTNIGMV
GQSGQIYARIAHPSGSLLVRWGTGANQRCRVAYQLDLHTKEPFLYLNKICEKE

Sequences:

>Translated_853_residues
MSPTINLNRKSLALLIAIVCSGSAQGEEYYFDPALLQGATYGQNIARFNEQQTPSGDYLADVYVNGTLVTASTNIRFDAV
KEGQQTEPCLPLSVMKAAQIKSLPATDAATECRPLREWVPHAGWQFDSATLRLLLTIPMTELTHKPRGYISPSEWDSGAL
ALFLRHNTNWTHTENTDSHYRYQYLWSGLNMGVNLGLWQVRHQSNLRYANSNQSGSAWRYNSVRTWVQRPVASINSILSL
GDSYTDSSLFGSLSFNGAKLVTDERMRPQGKRGYAPEVRGVAASSAHVVVKQLGKVIYETNVPPGPFYIDDLYNTRYQGD
LEVEVIEASGKTSRFTVPYSSVPDSVRPGNWHYSLAFGRVRQYYDIENRFFEGTFQHGVNNTITLNLGSRIAQRYQAWLA
GGVWATDMGAFGLNATWSNARAEHNDRQQGWRAELSYSKTFTTGTNLVLAAYRYSTNGFRDLQDVLGVRREAKTGIDYYS
DTLHQRNRLSATVSQPLGRLGTLNLSASTADYYNNQSRITQLQMGYSNQWRNISYGVNIARQRTTWDYDRFYHGVNEPLD
VSSRQKYTETTMSFNVSIPLDWGENRTSVAMNYNQSSQSRSSTISMTGSSGENSDLSWSVYGGYERYRNSNSDSSAPTTF
GGNLQQNTRFGALRANYDQGDNYRQEGLGASGTLVLHSGGLTAGPYTSDTFALIHADGAQGAIVQNGQGAVVDRFGYAIL
PSLSPYRVNNVTLDTRKMRSDAELTGGSQQIVPYAGAIARVNFATISGKAVLISVKMPDGGIPPMGADVFNGEGTNIGMV
GQSGQIYARIAHPSGSLLVRWGTGANQRCRVAYQLDLHTKEPFLYLNKICEKE
>Mature_852_residues
SPTINLNRKSLALLIAIVCSGSAQGEEYYFDPALLQGATYGQNIARFNEQQTPSGDYLADVYVNGTLVTASTNIRFDAVK
EGQQTEPCLPLSVMKAAQIKSLPATDAATECRPLREWVPHAGWQFDSATLRLLLTIPMTELTHKPRGYISPSEWDSGALA
LFLRHNTNWTHTENTDSHYRYQYLWSGLNMGVNLGLWQVRHQSNLRYANSNQSGSAWRYNSVRTWVQRPVASINSILSLG
DSYTDSSLFGSLSFNGAKLVTDERMRPQGKRGYAPEVRGVAASSAHVVVKQLGKVIYETNVPPGPFYIDDLYNTRYQGDL
EVEVIEASGKTSRFTVPYSSVPDSVRPGNWHYSLAFGRVRQYYDIENRFFEGTFQHGVNNTITLNLGSRIAQRYQAWLAG
GVWATDMGAFGLNATWSNARAEHNDRQQGWRAELSYSKTFTTGTNLVLAAYRYSTNGFRDLQDVLGVRREAKTGIDYYSD
TLHQRNRLSATVSQPLGRLGTLNLSASTADYYNNQSRITQLQMGYSNQWRNISYGVNIARQRTTWDYDRFYHGVNEPLDV
SSRQKYTETTMSFNVSIPLDWGENRTSVAMNYNQSSQSRSSTISMTGSSGENSDLSWSVYGGYERYRNSNSDSSAPTTFG
GNLQQNTRFGALRANYDQGDNYRQEGLGASGTLVLHSGGLTAGPYTSDTFALIHADGAQGAIVQNGQGAVVDRFGYAILP
SLSPYRVNNVTLDTRKMRSDAELTGGSQQIVPYAGAIARVNFATISGKAVLISVKMPDGGIPPMGADVFNGEGTNIGMVG
QSGQIYARIAHPSGSLLVRWGTGANQRCRVAYQLDLHTKEPFLYLNKICEKE

Specific function: Essential for piliation [H]

COG id: COG3188

COG function: function code NU; P pilus assembly protein, porin PapC

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fimbrial export usher family [H]

Homologues:

Organism=Escherichia coli, GI1790772, Length=874, Percent_Identity=31.9221967963387, Blast_Score=390, Evalue=1e-109,
Organism=Escherichia coli, GI1786744, Length=873, Percent_Identity=31.3860252004582, Blast_Score=353, Evalue=4e-98,
Organism=Escherichia coli, GI1789533, Length=860, Percent_Identity=31.7441860465116, Blast_Score=347, Evalue=2e-96,
Organism=Escherichia coli, GI1787172, Length=878, Percent_Identity=30.0683371298405, Blast_Score=346, Evalue=4e-96,
Organism=Escherichia coli, GI1788427, Length=860, Percent_Identity=29.4186046511628, Blast_Score=341, Evalue=1e-94,
Organism=Escherichia coli, GI1786332, Length=850, Percent_Identity=31.1764705882353, Blast_Score=336, Evalue=4e-93,
Organism=Escherichia coli, GI87081778, Length=869, Percent_Identity=25.7767548906789, Blast_Score=209, Evalue=7e-55,
Organism=Escherichia coli, GI1789610, Length=662, Percent_Identity=23.2628398791541, Blast_Score=122, Evalue=1e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000015
- InterPro:   IPR018030 [H]

Pfam domain/function: PF00577 Usher [H]

EC number: NA

Molecular weight: Translated: 94481; Mature: 94350

Theoretical pI: Translated: 8.76; Mature: 8.76

Prosite motif: PS01151 FIMBRIAL_USHER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPTINLNRKSLALLIAIVCSGSAQGEEYYFDPALLQGATYGQNIARFNEQQTPSGDYLA
CCCCCCCCHHHHEEEEEEEECCCCCCCEEEECHHHHCCCCCCCHHHHCCCCCCCCCCEEE
DVYVNGTLVTASTNIRFDAVKEGQQTEPCLPLSVMKAAQIKSLPATDAATECRPLREWVP
EEEECCEEEEEECCEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCC
HAGWQFDSATLRLLLTIPMTELTHKPRGYISPSEWDSGALALFLRHNTNWTHTENTDSHY
CCCCEECCCEEEEEEEECHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCE
RYQYLWSGLNMGVNLGLWQVRHQSNLRYANSNQSGSAWRYNSVRTWVQRPVASINSILSL
EEEEEECCCCCCEEEEEEEEEECCCCEECCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHC
GDSYTDSSLFGSLSFNGAKLVTDERMRPQGKRGYAPEVRGVAASSAHVVVKQLGKVIYET
CCCCCCCCEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHEEEC
NVPPGPFYIDDLYNTRYQGDLEVEVIEASGKTSRFTVPYSSVPDSVRPGNWHYSLAFGRV
CCCCCCEEEECCCCCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCEEEEEEHHHH
RQYYDIENRFFEGTFQHGVNNTITLNLGSRIAQRYQAWLAGGVWATDMGAFGLNATWSNA
HHHHHHHHHHCCCHHHCCCCCEEEEECCHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCC
RAEHNDRQQGWRAELSYSKTFTTGTNLVLAAYRYSTNGFRDLQDVLGVRREAKTGIDYYS
CCCCCCHHCCCEEEEEECEEEECCCCEEEEEEEECCCCHHHHHHHHHHHHHHHCCCHHHH
DTLHQRNRLSATVSQPLGRLGTLNLSASTADYYNNQSRITQLQMGYSNQWRNISYGVNIA
HHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHCCCHHEEEEECCCCCCCCEEEECEEEE
RQRTTWDYDRFYHGVNEPLDVSSRQKYTETTMSFNVSIPLDWGENRTSVAMNYNQSSQSR
ECCCCCCHHHHHCCCCCCCCCCCCCHHEEEEEEEEEEEEECCCCCCEEEEEECCCCCCCC
SSTISMTGSSGENSDLSWSVYGGYERYRNSNSDSSAPTTFGGNLQQNTRFGALRANYDQG
CCEEEEECCCCCCCCEEEEEECCHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCC
DNYRQEGLGASGTLVLHSGGLTAGPYTSDTFALIHADGAQGAIVQNGQGAVVDRFGYAIL
CCHHHHCCCCCCEEEEECCCCCCCCCCCCEEEEEECCCCCCCEEECCCCCEEECCCEEEC
PSLSPYRVNNVTLDTRKMRSDAELTGGSQQIVPYAGAIARVNFATISGKAVLISVKMPDG
CCCCCEEECEEEECHHHCCCCCCCCCCCCEEEEECCEEEEEEEEEECCCEEEEEEECCCC
GIPPMGADVFNGEGTNIGMVGQSGQIYARIAHPSGSLLVRWGTGANQRCRVAYQLDLHTK
CCCCCCCEEECCCCCEEEEECCCCCEEEEEECCCCCEEEEECCCCCCEEEEEEEEECCCC
EPFLYLNKICEKE
CCHHHHHHHHCCC
>Mature Secondary Structure 
SPTINLNRKSLALLIAIVCSGSAQGEEYYFDPALLQGATYGQNIARFNEQQTPSGDYLA
CCCCCCCHHHHEEEEEEEECCCCCCCEEEECHHHHCCCCCCCHHHHCCCCCCCCCCEEE
DVYVNGTLVTASTNIRFDAVKEGQQTEPCLPLSVMKAAQIKSLPATDAATECRPLREWVP
EEEECCEEEEEECCEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCC
HAGWQFDSATLRLLLTIPMTELTHKPRGYISPSEWDSGALALFLRHNTNWTHTENTDSHY
CCCCEECCCEEEEEEEECHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCE
RYQYLWSGLNMGVNLGLWQVRHQSNLRYANSNQSGSAWRYNSVRTWVQRPVASINSILSL
EEEEEECCCCCCEEEEEEEEEECCCCEECCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHC
GDSYTDSSLFGSLSFNGAKLVTDERMRPQGKRGYAPEVRGVAASSAHVVVKQLGKVIYET
CCCCCCCCEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHEEEC
NVPPGPFYIDDLYNTRYQGDLEVEVIEASGKTSRFTVPYSSVPDSVRPGNWHYSLAFGRV
CCCCCCEEEECCCCCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCEEEEEEHHHH
RQYYDIENRFFEGTFQHGVNNTITLNLGSRIAQRYQAWLAGGVWATDMGAFGLNATWSNA
HHHHHHHHHHCCCHHHCCCCCEEEEECCHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCC
RAEHNDRQQGWRAELSYSKTFTTGTNLVLAAYRYSTNGFRDLQDVLGVRREAKTGIDYYS
CCCCCCHHCCCEEEEEECEEEECCCCEEEEEEEECCCCHHHHHHHHHHHHHHHCCCHHHH
DTLHQRNRLSATVSQPLGRLGTLNLSASTADYYNNQSRITQLQMGYSNQWRNISYGVNIA
HHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHCCCHHEEEEECCCCCCCCEEEECEEEE
RQRTTWDYDRFYHGVNEPLDVSSRQKYTETTMSFNVSIPLDWGENRTSVAMNYNQSSQSR
ECCCCCCHHHHHCCCCCCCCCCCCCHHEEEEEEEEEEEEECCCCCCEEEEEECCCCCCCC
SSTISMTGSSGENSDLSWSVYGGYERYRNSNSDSSAPTTFGGNLQQNTRFGALRANYDQG
CCEEEEECCCCCCCCEEEEEECCHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCC
DNYRQEGLGASGTLVLHSGGLTAGPYTSDTFALIHADGAQGAIVQNGQGAVVDRFGYAIL
CCHHHHCCCCCCEEEEECCCCCCCCCCCCEEEEEECCCCCCCEEECCCCCEEECCCEEEC
PSLSPYRVNNVTLDTRKMRSDAELTGGSQQIVPYAGAIARVNFATISGKAVLISVKMPDG
CCCCCEEECEEEECHHHCCCCCCCCCCCCEEEEECCEEEEEEEEEECCCEEEEEEECCCC
GIPPMGADVFNGEGTNIGMVGQSGQIYARIAHPSGSLLVRWGTGANQRCRVAYQLDLHTK
CCCCCCCEEECCCCCEEEEECCCCCEEEEEECCCCCEEEEECCCCCCEEEEEEEEECCCC
EPFLYLNKICEKE
CCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7905461 [H]