| Definition | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 chromosome, complete genome. |
|---|---|
| Accession | NC_011094 |
| Length | 4,709,075 |
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The map label for this gene is 194737744
Identifier: 194737744
GI number: 194737744
Start: 675254
End: 675997
Strand: Direct
Name: 194737744
Synonym: SeSA_A0700
Alternate gene names: NA
Gene position: 675254-675997 (Clockwise)
Preceding gene: 194737418
Following gene: 194736392
Centisome position: 14.34
GC content: 56.59
Gene sequence:
>744_bases ATGGGAACACCAAACCCGCTGGTAAAAACGAAAGGCGCCGGAACCACATTCTGGCTGTATACCGGCAGCGGCGATGCGTT TAAAAATCCACTGGCTGACGATGACTGGCTGCGACTGGCAGGTATTAAGGATCTGCAGCCCGGAGAAATGAGTGCAGATG CGGAAGACGATGACTATCTTGATGATGAAAATGCCGACTGGAAAAGCACTACGCAGGGGCAGAAAAGCGTCGGTGACACC ACGGCCACGCTGGCCTGGAAACCCGGTGAGACCGGACAGAAAAAACTGGTTGAGCTGTTTGACACCGGCGAAGTTCGCGC CTTCCGTATCAGGTATCCTAACGGGACGGTTGATGTGTTCCGCGGCTGGCTGAGTTCACTGGGTAAAACCGTGACGTCCA AAGAGGTGATGACACGCAGCGTAAAAATCACCGGCGTCGGGCGTCCTTCTCTTGCGGAGGAGGATACACCTGACGTAGTC AGCGTATCCGGCGTGACCGTTGCGCCGGCCAGTGCCACGGTGGCTGCCGGAGCCACCACCACGCTGACATTTACGGTAAA ACCTGATAACGCGTCAGATAAAACGCTGCAGGTTGCGACCGCCGATCCGCTGATCGCCACCGTCACGCTGAAGGATAATG TGGCCACGGTTAAAGGCGTGAAGGCGGGCAGCGTGAATATTGTTGGCATCAGCAGTGACGGCAGTCTTGTCGCGGTGGCA GCAGTGACAGTGACGGCGTCATAA
Upstream 100 bases:
>100_bases ACGCCGCTGGGTTATGACTACCAGCGTGACAGCGAAATGGCAACGTGGGGGATGGCAGAAATTACTTACCGGATCACCTA TATCAACTGAGGAGGATATG
Downstream 100 bases:
>100_bases CCCTCTCTTATCAGTCCGCCCCGGTTCCGGGGCTTCTATGGAAAATCATCATGTTTCTCAATACAGACACCTTTAACTAC GGTGGGCATTCCATCGTGCT
Product: gifsy-1 prophage VmtV
Products: NA
Alternate protein names: Gifsy-2 Prophage VmtV; Tail-Like Protein; Ig Domain-Containing Domain-Containing Protein; Tail Protein
Number of amino acids: Translated: 247; Mature: 246
Protein sequence:
>247_residues MGTPNPLVKTKGAGTTFWLYTGSGDAFKNPLADDDWLRLAGIKDLQPGEMSADAEDDDYLDDENADWKSTTQGQKSVGDT TATLAWKPGETGQKKLVELFDTGEVRAFRIRYPNGTVDVFRGWLSSLGKTVTSKEVMTRSVKITGVGRPSLAEEDTPDVV SVSGVTVAPASATVAAGATTTLTFTVKPDNASDKTLQVATADPLIATVTLKDNVATVKGVKAGSVNIVGISSDGSLVAVA AVTVTAS
Sequences:
>Translated_247_residues MGTPNPLVKTKGAGTTFWLYTGSGDAFKNPLADDDWLRLAGIKDLQPGEMSADAEDDDYLDDENADWKSTTQGQKSVGDT TATLAWKPGETGQKKLVELFDTGEVRAFRIRYPNGTVDVFRGWLSSLGKTVTSKEVMTRSVKITGVGRPSLAEEDTPDVV SVSGVTVAPASATVAAGATTTLTFTVKPDNASDKTLQVATADPLIATVTLKDNVATVKGVKAGSVNIVGISSDGSLVAVA AVTVTAS >Mature_246_residues GTPNPLVKTKGAGTTFWLYTGSGDAFKNPLADDDWLRLAGIKDLQPGEMSADAEDDDYLDDENADWKSTTQGQKSVGDTT ATLAWKPGETGQKKLVELFDTGEVRAFRIRYPNGTVDVFRGWLSSLGKTVTSKEVMTRSVKITGVGRPSLAEEDTPDVVS VSGVTVAPASATVAAGATTTLTFTVKPDNASDKTLQVATADPLIATVTLKDNVATVKGVKAGSVNIVGISSDGSLVAVAA VTVTAS
Specific function: Unknown
COG id: COG5492
COG function: function code N; Bacterial surface proteins containing Ig-like domains
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25715; Mature: 25584
Theoretical pI: Translated: 4.51; Mature: 4.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTPNPLVKTKGAGTTFWLYTGSGDAFKNPLADDDWLRLAGIKDLQPGEMSADAEDDDYL CCCCCCCEEECCCCEEEEEEECCCHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCC DDENADWKSTTQGQKSVGDTTATLAWKPGETGQKKLVELFDTGEVRAFRIRYPNGTVDVF CCCCCCCCCCCCCCHHCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEEEEECCCCCHHHH RGWLSSLGKTVTSKEVMTRSVKITGVGRPSLAEEDTPDVVSVSGVTVAPASATVAAGATT HHHHHHHCCHHHHHHHHEEEEEEEECCCCCCCCCCCCCEEEECCEEECCCCCEEECCCEE TLTFTVKPDNASDKTLQVATADPLIATVTLKDNVATVKGVKAGSVNIVGISSDGSLVAVA EEEEEECCCCCCCCEEEEEECCCEEEEEEECCCCEEEEEECCCCEEEEEECCCCCEEEEE AVTVTAS EEEEECC >Mature Secondary Structure GTPNPLVKTKGAGTTFWLYTGSGDAFKNPLADDDWLRLAGIKDLQPGEMSADAEDDDYL CCCCCCEEECCCCEEEEEEECCCHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCC DDENADWKSTTQGQKSVGDTTATLAWKPGETGQKKLVELFDTGEVRAFRIRYPNGTVDVF CCCCCCCCCCCCCCHHCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEEEEECCCCCHHHH RGWLSSLGKTVTSKEVMTRSVKITGVGRPSLAEEDTPDVVSVSGVTVAPASATVAAGATT HHHHHHHCCHHHHHHHHEEEEEEEECCCCCCCCCCCCCEEEECCEEECCCCCEEECCCEE TLTFTVKPDNASDKTLQVATADPLIATVTLKDNVATVKGVKAGSVNIVGISSDGSLVAVA EEEEEECCCCCCCCEEEEEECCCEEEEEEECCCCEEEEEECCCCEEEEEECCCCCEEEEE AVTVTAS EEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA