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The map label for this gene is yqeI [H]

Identifier: 194737607

GI number: 194737607

Start: 3838761

End: 3839525

Strand: Reverse

Name: yqeI [H]

Synonym: SeSA_A3964

Alternate gene names: 194737607

Gene position: 3839525-3838761 (Counterclockwise)

Preceding gene: 194738245

Following gene: 194734649

Centisome position: 81.53

GC content: 47.32

Gene sequence:

>765_bases
ATGTTATGGATAATTAACGATAATATTGAATTTAATCCAGAAATGAATCGCCTGGCGTCATTATCGAGGCCAGATCTCAA
CATTATTCTGACAACGCCCGCCAGCCGTTGCTTGCGCCTTCTGCTGGAAAACGCCCCCTCTGTCGTCTCACAACAAACAT
TCTTTCAAAAAGTGTGGGAAGAAGACGGCATGGTGGTGTCGGCAAATACGCTTTATCAGAATATCTCCATTATTCGCCGC
GGATTACGTACCGTTGGCGAAAATGAAGATACGCTGATAATCACGGTTCCGCGTAGAGGCTTTCAGATTGAGCCTGGCGC
GAGCATCATGACCATCCGCAAAGACTTCGCTCAGACAATAGAAAAAAAGGGTGAGACGCCGCCGCGTATGTCAGGGCGTT
GGTTTAAACATTATGTACCTGTACTTTGGATGACCGGGACATTTGCTGTCGGTATTTTGCTTGGCACTATAAGCTGGCAA
ACCGTTCCCGATAAGGATTTTTATGATCGCTACACGCTGGTTGAAACAACGCAGGGTTGTCATTTTTTCTCGCGGAATGA
AGATATCGAAAGCGGTAGCCGCTTTGCAGGCTATAAGTCAATGATTCTAAAAACCGGTATGGATTGTCAGAAATACCCAT
GGGTCTATTTTCCTTCCAGCAGTCGCACCCCAGCGGTTACGGCATTGATTTGTCAGCAACCGTATAAAACGCGCGGCGAT
ACAGGCTGCGTGACGCTTTTTTTCCGCGGGGTGACACATGGGTAA

Upstream 100 bases:

>100_bases
ACAATCCATGTCCTGCTACGCAGCCACAGCATCAGACTATACTCAGTGGTGTCTATTAACCCTCTCCAACTACGTTATGT
TTTGGCATGGTAACAATGCG

Downstream 100 bases:

>100_bases
AAAGGCACTGATGTTAGCCTGCCTGACGCTACTGTTTCTGGGAGTAGGGCTTGGGCATCTTGTTCATTTATATACGGAAA
AGAACCGGGATCCAGAGAAA

Product: transcriptional regulatory protein C

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MLWIINDNIEFNPEMNRLASLSRPDLNIILTTPASRCLRLLLENAPSVVSQQTFFQKVWEEDGMVVSANTLYQNISIIRR
GLRTVGENEDTLIITVPRRGFQIEPGASIMTIRKDFAQTIEKKGETPPRMSGRWFKHYVPVLWMTGTFAVGILLGTISWQ
TVPDKDFYDRYTLVETTQGCHFFSRNEDIESGSRFAGYKSMILKTGMDCQKYPWVYFPSSSRTPAVTALICQQPYKTRGD
TGCVTLFFRGVTHG

Sequences:

>Translated_254_residues
MLWIINDNIEFNPEMNRLASLSRPDLNIILTTPASRCLRLLLENAPSVVSQQTFFQKVWEEDGMVVSANTLYQNISIIRR
GLRTVGENEDTLIITVPRRGFQIEPGASIMTIRKDFAQTIEKKGETPPRMSGRWFKHYVPVLWMTGTFAVGILLGTISWQ
TVPDKDFYDRYTLVETTQGCHFFSRNEDIESGSRFAGYKSMILKTGMDCQKYPWVYFPSSSRTPAVTALICQQPYKTRGD
TGCVTLFFRGVTHG
>Mature_254_residues
MLWIINDNIEFNPEMNRLASLSRPDLNIILTTPASRCLRLLLENAPSVVSQQTFFQKVWEEDGMVVSANTLYQNISIIRR
GLRTVGENEDTLIITVPRRGFQIEPGASIMTIRKDFAQTIEKKGETPPRMSGRWFKHYVPVLWMTGTFAVGILLGTISWQ
TVPDKDFYDRYTLVETTQGCHFFSRNEDIESGSRFAGYKSMILKTGMDCQKYPWVYFPSSSRTPAVTALICQQPYKTRGD
TGCVTLFFRGVTHG

Specific function: Unknown

COG id: COG3710

COG function: function code K; DNA-binding winged-HTH domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To V.cholerae cholera toxin transcriptional activator (toxR) [H]

Homologues:

Organism=Escherichia coli, GI1789213, Length=268, Percent_Identity=41.4179104477612, Blast_Score=214, Evalue=3e-57,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001867
- InterPro:   IPR016032
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 28957; Mature: 28957

Theoretical pI: Translated: 8.70; Mature: 8.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLWIINDNIEFNPEMNRLASLSRPDLNIILTTPASRCLRLLLENAPSVVSQQTFFQKVWE
CEEEEECCEEECCCHHHHHHCCCCCCEEEEECCHHHHHHHHHHCCCHHHHHHHHHHHHHH
EDGMVVSANTLYQNISIIRRGLRTVGENEDTLIITVPRRGFQIEPGASIMTIRKDFAQTI
CCCEEEEHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEECCCCCEEHHHHHHHHHH
EKKGETPPRMSGRWFKHYVPVLWMTGTFAVGILLGTISWQTVPDKDFYDRYTLVETTQGC
HHCCCCCCCCCCCHHHHHHHHEEHHHHHHHHHHHHHCCCCCCCCCCHHCCEEEEECCCCC
HFFSRNEDIESGSRFAGYKSMILKTGMDCQKYPWVYFPSSSRTPAVTALICQQPYKTRGD
EEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCEEHEECCCCCCCCCC
TGCVTLFFRGVTHG
CCEEEEEEECCCCC
>Mature Secondary Structure
MLWIINDNIEFNPEMNRLASLSRPDLNIILTTPASRCLRLLLENAPSVVSQQTFFQKVWE
CEEEEECCEEECCCHHHHHHCCCCCCEEEEECCHHHHHHHHHHCCCHHHHHHHHHHHHHH
EDGMVVSANTLYQNISIIRRGLRTVGENEDTLIITVPRRGFQIEPGASIMTIRKDFAQTI
CCCEEEEHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEECCCCCEEHHHHHHHHHH
EKKGETPPRMSGRWFKHYVPVLWMTGTFAVGILLGTISWQTVPDKDFYDRYTLVETTQGC
HHCCCCCCCCCCCHHHHHHHHEEHHHHHHHHHHHHHCCCCCCCCCCHHCCEEEEECCCCC
HFFSRNEDIESGSRFAGYKSMILKTGMDCQKYPWVYFPSSSRTPAVTALICQQPYKTRGD
EEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCEEHEECCCCCCCCCC
TGCVTLFFRGVTHG
CCEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]