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The map label for this gene is rodZ [H]

Identifier: 194737551

GI number: 194737551

Start: 2659614

End: 2660618

Strand: Reverse

Name: rodZ [H]

Synonym: SeSA_A2763

Alternate gene names: 194737551

Gene position: 2660618-2659614 (Counterclockwise)

Preceding gene: 194738017

Following gene: 194735499

Centisome position: 56.5

GC content: 57.01

Gene sequence:

>1005_bases
ATGAATACTGAAGCCACGCACGACCAAAATGAAGCACAAACCACCGGCGTTCGTCTGCGCAATGCCCGTGAACAACTCGG
ACTCAGCCAGCAGGCTGTCGCTGAGCGACTTTGCCTGAAGGTTTCTACGGTACGCGATATTGAAGAAGATAAGGCGCCGT
CCGATCTTGCTTCAACCTTCCTGCGCGGATATATCCGCTCATATGCGCGTCTGGTGCATGTTCCAGAAGAGGAACTGCTG
CCGGGACTGGAAAAACAGGCCCCGCTGCGCGCCGCCAAAGTCGCTCCGATGCAGAGTTTCTCATTAGGAAAGCGTCGCAA
AAAACGCGACGGCTGGTTAATGTCTTTTACCTGGCTGGTACTGTTTGTGGTCGTAGGGCTGACCGGCGCCTGGTGGTGGC
AGAACCATAAGGCGCAGCAGGAAGAGATCACGACAATGGCCGATCAAAGCACGGCTGAACTGAACGCAGATAAAGACAGC
GGCCAAAATGTACCGCTGGACACCCGTGACGCGACAAGCCAGGATACGACGCCAGCGCAAACGGCTCCGGCTCCTGCGAC
GCCGGTTGATTCGACAGCGGCGACGCAAACGCCAGCGGCAACGGCAACGGCAACGCAAAATACGGTAGTCGCGCCTTCGC
AGGCGAATGTCGATACGGCTGCGACATCTGCCGCGCCAGCGGCAACGGAAACGCCGTCCGCGCTGCCGACCAGTCAGGCT
GGCGTAGCGGCGCCTGCTGCCGATCCGAACGCGCTGGTGATGAATTTTACCGCTGACTGCTGGCTCGAAGTCACTGACGC
CACGGGTAAGAAGCTGTTTAGCGGTATGCAGCGTAAAGATGGTAATTTAAACCTAACAGGTCAGGCGCCTTATAAACTTA
AAATTGGCGCACCGGCCGCGGTGCAGATCCAGTATCAAGGAAAACCTGTCGATCTGAGCCGCTTTATCAGAACTAATCAG
GTTGCGCGTCTGACCCTTAATGCCGAACCGACACCGGCGCAGTAA

Upstream 100 bases:

>100_bases
TCTGACTAAGGTTAACTAACCTGATGTTTCGCGGTGTGGGCGGGCATTACGGCTCGTCGGCGCCTGAATCCTAATTTACA
CGTACCTGTAGCTGTAGCGA

Downstream 100 bases:

>100_bases
CAGACGGGTAACGCGGGAGATTTTTCATGCATAACCAGGCTCCGATTCAACGTAGAAAATCGACACGTATTTACGTTGGG
AATGTGCCGATTGGCGATGG

Product: cytoskeletal protein RodZ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 334; Mature: 334

Protein sequence:

>334_residues
MNTEATHDQNEAQTTGVRLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPSDLASTFLRGYIRSYARLVHVPEEELL
PGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMSFTWLVLFVVVGLTGAWWWQNHKAQQEEITTMADQSTAELNADKDS
GQNVPLDTRDATSQDTTPAQTAPAPATPVDSTAATQTPAATATATQNTVVAPSQANVDTAATSAAPAATETPSALPTSQA
GVAAPAADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQ
VARLTLNAEPTPAQ

Sequences:

>Translated_334_residues
MNTEATHDQNEAQTTGVRLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPSDLASTFLRGYIRSYARLVHVPEEELL
PGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMSFTWLVLFVVVGLTGAWWWQNHKAQQEEITTMADQSTAELNADKDS
GQNVPLDTRDATSQDTTPAQTAPAPATPVDSTAATQTPAATATATQNTVVAPSQANVDTAATSAAPAATETPSALPTSQA
GVAAPAADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQ
VARLTLNAEPTPAQ
>Mature_334_residues
MNTEATHDQNEAQTTGVRLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPSDLASTFLRGYIRSYARLVHVPEEELL
PGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMSFTWLVLFVVVGLTGAWWWQNHKAQQEEITTMADQSTAELNADKDS
GQNVPLDTRDATSQDTTPAQTAPAPATPVDSTAATQTPAATATATQNTVVAPSQANVDTAATSAAPAATETPSALPTSQA
GVAAPAADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQ
VARLTLNAEPTPAQ

Specific function: Cytoskeletal protein that is involved in cell-shape control through regulation of the length of the long axis [H]

COG id: COG1426

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein. Note=Forms helical filaments along the long axis of the cell (By similarity) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788864, Length=342, Percent_Identity=81.8713450292398, Blast_Score=528, Evalue=1e-151,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 35833; Mature: 35833

Theoretical pI: Translated: 6.30; Mature: 6.30

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTEATHDQNEAQTTGVRLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPSDLASTF
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
LRGYIRSYARLVHVPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMSFTWLV
HHHHHHHHHHHHCCCHHHHCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHH
LFVVVGLTGAWWWQNHKAQQEEITTMADQSTAELNADKDSGQNVPLDTRDATSQDTTPAQ
HHHHHHCCCHHHHCCCCCHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
TAPAPATPVDSTAATQTPAATATATQNTVVAPSQANVDTAATSAAPAATETPSALPTSQA
CCCCCCCCCCCCCCCCCCCCCEECCCCEEECCCCCCCCHHHCCCCCCCCCCCCCCCCCCC
GVAAPAADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAA
CCCCCCCCCCEEEEEECCEEEEEEECCHHHHHHHHHHCCCCCEEEECCCCEEEEECCCEE
VQIQYQGKPVDLSRFIRTNQVARLTLNAEPTPAQ
EEEEECCCCCCHHHHHHCCCEEEEEECCCCCCCC
>Mature Secondary Structure
MNTEATHDQNEAQTTGVRLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPSDLASTF
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
LRGYIRSYARLVHVPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMSFTWLV
HHHHHHHHHHHHCCCHHHHCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHH
LFVVVGLTGAWWWQNHKAQQEEITTMADQSTAELNADKDSGQNVPLDTRDATSQDTTPAQ
HHHHHHCCCHHHHCCCCCHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
TAPAPATPVDSTAATQTPAATATATQNTVVAPSQANVDTAATSAAPAATETPSALPTSQA
CCCCCCCCCCCCCCCCCCCCCEECCCCEEECCCCCCCCHHHCCCCCCCCCCCCCCCCCCC
GVAAPAADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAA
CCCCCCCCCCEEEEEECCEEEEEEECCHHHHHHHHHHCCCCCEEEECCCCEEEEECCCEE
VQIQYQGKPVDLSRFIRTNQVARLTLNAEPTPAQ
EEEEECCCCCCHHHHHHCCCEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA