| Definition | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 chromosome, complete genome. |
|---|---|
| Accession | NC_011094 |
| Length | 4,709,075 |
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The map label for this gene is yjiJ [H]
Identifier: 194737502
GI number: 194737502
Start: 4632380
End: 4633564
Strand: Reverse
Name: yjiJ [H]
Synonym: SeSA_A4772
Alternate gene names: 194737502
Gene position: 4633564-4632380 (Counterclockwise)
Preceding gene: 194738270
Following gene: 194736685
Centisome position: 98.4
GC content: 56.62
Gene sequence:
>1185_bases ATGGTTCATGCTCAGAGCGCTTCACCTCGCCATCCCATTTTTACGGCGCTTTTCGGTATGATGGTATTGACGCTGGGGAT GGGAGTTGGCCGCTTTCTGTATACGCCCATGCTGCCGGTAATGCTGGCGGAAAAGCAGCTAACGTTTAACGAACTCTCGT GGATTGCCAGCGCCAATTATGCAGGGTACCTGGCGGGAAGCTTACTGTTTTCCTTTGGCCTTTTTCATCTCCCCTCTCGT CTACGCCCCATGCTGCTGGCTTCGGCGGTCGCCACCGGTATTCTTATTCTGTCTATGGCGATATTTACTCAGCCCGCGGT CGTCATGTTGGTGCGCTTCCTGGCAGGCGTCGCGAGTGCGGGAATGATGATTTTTGGATCAATGATTGTGTTGCATCATA CCCGCCATCCGTTTGTGATCGCCGCGCTCTTTTCCGGCGTCGGGGCCGGGATTGCACTGGGCAACGAATATGTCATTGGC GGTTTACATTATGCGCTTTCGGCCCATTCGCTATGGCTGGGGGCCGGAGCGCTCGCCGGTATATTGCTATTAATCGTGGC AATGTTGACTCCCCCCCGCGCTCATGCGCTGCCGCCTGCGCCCTTAGCAAGAATCGAAAATCAGCCTATGCCCTGGTGGC AACTGGCGCTGTTGTACGGTTTCGCCGGATTCGGCTACATCATTGTCGCTACCTATTTGCCGCTGATGGCGAAAAGCGCG GGCTCTCCGCTACTCACGGCGCACCTTTGGTCGTTGGTCGGCCTGGCGATCATTCCCGGCTGCTTCGGCTGGCTGTGGGC GGCAAAACATTGGGGCGTCCTGCCATGCCTGACCGCGAACCTGTTGATCCAGAGCGCCTGCGTGCTGCTGTCTCTCGCCA GCGACTCGTTGTTGCTGTTAATACTGAGCAGTATTGGTTTTGGCGCCACGTTTATGGGCACAACCTCGCTGGTGATGCCG CTTGCCCGACAGCTCAGCGCGCCGGGCAATATTAATTTATTAGGCCTGGTGACGCTAACGTATGGTATTGGGCAAATTCT CGGTCCGCTCGCCGCCAGTCTGTCAGGCAATGGCGCGTCGGCAATTATCAACGCCACGCTTTGCGGCGCCGCGGCGCTCT TTTTTGCCGCGCTGATCAGCGCCGCGCAGCAGATAAAACAAAAACGGTTTGTGATACGTGAATAA
Upstream 100 bases:
>100_bases ACTTTCTTTTCTTGCAAATTTGAAACATTAATTTTACTTTTTATTATCATTTACAACAACAATCCGGCATTCCTGCCTTA CTTTAGCAAAGAGAAAAACC
Downstream 100 bases:
>100_bases GCGGTAGAGTAAACTCGCGCTCTCCGCACCGGGTTGTATCTTTAACGCTATTCGCGGCGCAATGCGGATCTGTTTTTAAT AGCACATCCTCAACACGTTA
Product: transporter major facilitator family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 394; Mature: 394
Protein sequence:
>394_residues MVHAQSASPRHPIFTALFGMMVLTLGMGVGRFLYTPMLPVMLAEKQLTFNELSWIASANYAGYLAGSLLFSFGLFHLPSR LRPMLLASAVATGILILSMAIFTQPAVVMLVRFLAGVASAGMMIFGSMIVLHHTRHPFVIAALFSGVGAGIALGNEYVIG GLHYALSAHSLWLGAGALAGILLLIVAMLTPPRAHALPPAPLARIENQPMPWWQLALLYGFAGFGYIIVATYLPLMAKSA GSPLLTAHLWSLVGLAIIPGCFGWLWAAKHWGVLPCLTANLLIQSACVLLSLASDSLLLLILSSIGFGATFMGTTSLVMP LARQLSAPGNINLLGLVTLTYGIGQILGPLAASLSGNGASAIINATLCGAAALFFAALISAAQQIKQKRFVIRE
Sequences:
>Translated_394_residues MVHAQSASPRHPIFTALFGMMVLTLGMGVGRFLYTPMLPVMLAEKQLTFNELSWIASANYAGYLAGSLLFSFGLFHLPSR LRPMLLASAVATGILILSMAIFTQPAVVMLVRFLAGVASAGMMIFGSMIVLHHTRHPFVIAALFSGVGAGIALGNEYVIG GLHYALSAHSLWLGAGALAGILLLIVAMLTPPRAHALPPAPLARIENQPMPWWQLALLYGFAGFGYIIVATYLPLMAKSA GSPLLTAHLWSLVGLAIIPGCFGWLWAAKHWGVLPCLTANLLIQSACVLLSLASDSLLLLILSSIGFGATFMGTTSLVMP LARQLSAPGNINLLGLVTLTYGIGQILGPLAASLSGNGASAIINATLCGAAALFFAALISAAQQIKQKRFVIRE >Mature_394_residues MVHAQSASPRHPIFTALFGMMVLTLGMGVGRFLYTPMLPVMLAEKQLTFNELSWIASANYAGYLAGSLLFSFGLFHLPSR LRPMLLASAVATGILILSMAIFTQPAVVMLVRFLAGVASAGMMIFGSMIVLHHTRHPFVIAALFSGVGAGIALGNEYVIG GLHYALSAHSLWLGAGALAGILLLIVAMLTPPRAHALPPAPLARIENQPMPWWQLALLYGFAGFGYIIVATYLPLMAKSA GSPLLTAHLWSLVGLAIIPGCFGWLWAAKHWGVLPCLTANLLIQSACVLLSLASDSLLLLILSSIGFGATFMGTTSLVMP LARQLSAPGNINLLGLVTLTYGIGQILGPLAASLSGNGASAIINATLCGAAALFFAALISAAQQIKQKRFVIRE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790788, Length=386, Percent_Identity=70.9844559585492, Blast_Score=521, Evalue=1e-149,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010645 - InterPro: IPR016196 [H]
Pfam domain/function: PF06779 DUF1228 [H]
EC number: NA
Molecular weight: Translated: 41456; Mature: 41456
Theoretical pI: Translated: 10.07; Mature: 10.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVHAQSASPRHPIFTALFGMMVLTLGMGVGRFLYTPMLPVMLAEKQLTFNELSWIASANY CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCC AGYLAGSLLFSFGLFHLPSRLRPMLLASAVATGILILSMAIFTQPAVVMLVRFLAGVASA HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH GMMIFGSMIVLHHTRHPFVIAALFSGVGAGIALGNEYVIGGLHYALSAHSLWLGAGALAG HHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHEECCCCEEHHHHHHHHHHHHHHHHHHHHH ILLLIVAMLTPPRAHALPPAPLARIENQPMPWWQLALLYGFAGFGYIIVATYLPLMAKSA HHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GSPLLTAHLWSLVGLAIIPGCFGWLWAAKHWGVLPCLTANLLIQSACVLLSLASDSLLLL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHH ILSSIGFGATFMGTTSLVMPLARQLSAPGNINLLGLVTLTYGIGQILGPLAASLSGNGAS HHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCHH AIINATLCGAAALFFAALISAAQQIKQKRFVIRE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MVHAQSASPRHPIFTALFGMMVLTLGMGVGRFLYTPMLPVMLAEKQLTFNELSWIASANY CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCC AGYLAGSLLFSFGLFHLPSRLRPMLLASAVATGILILSMAIFTQPAVVMLVRFLAGVASA HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH GMMIFGSMIVLHHTRHPFVIAALFSGVGAGIALGNEYVIGGLHYALSAHSLWLGAGALAG HHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHEECCCCEEHHHHHHHHHHHHHHHHHHHHH ILLLIVAMLTPPRAHALPPAPLARIENQPMPWWQLALLYGFAGFGYIIVATYLPLMAKSA HHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GSPLLTAHLWSLVGLAIIPGCFGWLWAAKHWGVLPCLTANLLIQSACVLLSLASDSLLLL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHH ILSSIGFGATFMGTTSLVMPLARQLSAPGNINLLGLVTLTYGIGQILGPLAASLSGNGAS HHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCHH AIINATLCGAAALFFAALISAAQQIKQKRFVIRE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503 [H]