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The map label for this gene is adiY [H]

Identifier: 194737377

GI number: 194737377

Start: 4428226

End: 4428957

Strand: Reverse

Name: adiY [H]

Synonym: SeSA_A4550

Alternate gene names: 194737377

Gene position: 4428957-4428226 (Counterclockwise)

Preceding gene: 194735658

Following gene: 194736542

Centisome position: 94.05

GC content: 42.9

Gene sequence:

>732_bases
GTGTTATTAACCGAAAAAGATACATGGTTACGAGTAAATGGTAAGGAGCCAATCAGTTTAAAAGCGAATCATATGGCCAT
TCTGGCTTGTGAAAATAACGTTATTGACATTTCATCATTAAATAGCGTGCTAGTAATACAAGTGAGTCGCAATAATATTA
AAGACTATTTACAATTCCTGAATAAAGATCTCTCACACCTTCCCGTCTGGCAACGCAACGCCGATCCCTTATTGACCGCC
AACTGTCTGACGCCGGATATCTTCAGGGTCGCTGCCCGCTACAGCGCGATGGAAACACCGGATGAAATTGTTAGTGAACG
TACCCGTGCGCTCCTTTTCACCGTTTTATCCCGCTTTCTTGACCACAAAAAATTTATTTCTTTGTTAATGCACATGCTGC
GCAGCCGCATCAGTGACAGCGTTTACCACATCATTCAGAGCGATATTCATAAAGACTGGAATCTGAGCGCCGTTGCCAGT
TGTCTGTGCCTGAGTCCAAGCTTGTTAAAGAAAAAGCTCAAAAACGAGAATACCAGTTATAGCCAAATAATCACGACCTG
CCGAATGCGTTATGCCGTAAACCAATTATTAATGGACGGAAAGAATATCTCTCAAGTCTCACAGCTGTGTGGGTATAACA
GCACATCGTACTTTATTTCCGTGTTTAAAGAGTTTTATGGTATGACCCCCCTGCATTATGTTAGCCAACATCGGGAACGA
TCGGCTGCCTAA

Upstream 100 bases:

>100_bases
ACTCAGTCCCCGTTATCTCTCCCGTTTGGCGAGATCCGGTATTTTATGTTCATATTCCAGGAGTTCGGGTATGAGGATTT
GCAGCAACGAACCTTGCATA

Downstream 100 bases:

>100_bases
TTTTTCTACACTCAACGATAAGACACGATAATAACAGCATTGGCGATAACCCGTCTCCGACATAATTCAGCGGCATTCTG
AGGGGGTATGATACGACGTA

Product: porin thermoregulatory protein EnvY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MLLTEKDTWLRVNGKEPISLKANHMAILACENNVIDISSLNSVLVIQVSRNNIKDYLQFLNKDLSHLPVWQRNADPLLTA
NCLTPDIFRVAARYSAMETPDEIVSERTRALLFTVLSRFLDHKKFISLLMHMLRSRISDSVYHIIQSDIHKDWNLSAVAS
CLCLSPSLLKKKLKNENTSYSQIITTCRMRYAVNQLLMDGKNISQVSQLCGYNSTSYFISVFKEFYGMTPLHYVSQHRER
SAA

Sequences:

>Translated_243_residues
MLLTEKDTWLRVNGKEPISLKANHMAILACENNVIDISSLNSVLVIQVSRNNIKDYLQFLNKDLSHLPVWQRNADPLLTA
NCLTPDIFRVAARYSAMETPDEIVSERTRALLFTVLSRFLDHKKFISLLMHMLRSRISDSVYHIIQSDIHKDWNLSAVAS
CLCLSPSLLKKKLKNENTSYSQIITTCRMRYAVNQLLMDGKNISQVSQLCGYNSTSYFISVFKEFYGMTPLHYVSQHRER
SAA
>Mature_243_residues
MLLTEKDTWLRVNGKEPISLKANHMAILACENNVIDISSLNSVLVIQVSRNNIKDYLQFLNKDLSHLPVWQRNADPLLTA
NCLTPDIFRVAARYSAMETPDEIVSERTRALLFTVLSRFLDHKKFISLLMHMLRSRISDSVYHIIQSDIHKDWNLSAVAS
CLCLSPSLLKKKLKNENTSYSQIITTCRMRYAVNQLLMDGKNISQVSQLCGYNSTSYFISVFKEFYGMTPLHYVSQHRER
SAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790557, Length=243, Percent_Identity=79.0123456790123, Blast_Score=407, Evalue=1e-115,
Organism=Escherichia coli, GI1786778, Length=240, Percent_Identity=58.3333333333333, Blast_Score=267, Evalue=5e-73,
Organism=Escherichia coli, GI1789933, Length=232, Percent_Identity=35.7758620689655, Blast_Score=132, Evalue=3e-32,
Organism=Escherichia coli, GI1787776, Length=196, Percent_Identity=35.7142857142857, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI1786776, Length=96, Percent_Identity=43.75, Blast_Score=93, Evalue=2e-20,
Organism=Escherichia coli, GI1789932, Length=127, Percent_Identity=40.1574803149606, Blast_Score=89, Evalue=3e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018062
- InterPro:   IPR020449
- InterPro:   IPR018060 [H]

Pfam domain/function: PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 27878; Mature: 27878

Theoretical pI: Translated: 9.17; Mature: 9.17

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLTEKDTWLRVNGKEPISLKANHMAILACENNVIDISSLNSVLVIQVSRNNIKDYLQFL
CCCCCCCCEEEECCCCCCEEECCCEEEEEECCCEEECCCCCCEEEEEECCCCHHHHHHHH
NKDLSHLPVWQRNADPLLTANCLTPDIFRVAARYSAMETPDEIVSERTRALLFTVLSRFL
HHHHHHCCCCCCCCCCCEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
DHKKFISLLMHMLRSRISDSVYHIIQSDIHKDWNLSAVASCLCLSPSLLKKKLKNENTSY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHCCCCHH
SQIITTCRMRYAVNQLLMDGKNISQVSQLCGYNSTSYFISVFKEFYGMTPLHYVSQHRER
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHH
SAA
CCC
>Mature Secondary Structure
MLLTEKDTWLRVNGKEPISLKANHMAILACENNVIDISSLNSVLVIQVSRNNIKDYLQFL
CCCCCCCCEEEECCCCCCEEECCCEEEEEECCCEEECCCCCCEEEEEECCCCHHHHHHHH
NKDLSHLPVWQRNADPLLTANCLTPDIFRVAARYSAMETPDEIVSERTRALLFTVLSRFL
HHHHHHCCCCCCCCCCCEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
DHKKFISLLMHMLRSRISDSVYHIIQSDIHKDWNLSAVASCLCLSPSLLKKKLKNENTSY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHCCCCHH
SQIITTCRMRYAVNQLLMDGKNISQVSQLCGYNSTSYFISVFKEFYGMTPLHYVSQHRER
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHH
SAA
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]