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The map label for this gene is rcnA [H]

Identifier: 194737277

GI number: 194737277

Start: 3088451

End: 3089299

Strand: Direct

Name: rcnA [H]

Synonym: SeSA_A3193

Alternate gene names: 194737277

Gene position: 3088451-3089299 (Clockwise)

Preceding gene: 194735678

Following gene: 194733960

Centisome position: 65.59

GC content: 53.71

Gene sequence:

>849_bases
ATGGGTGAATTTTCGACACTTCTTCAGCAAGGAAACGGCTGGTTCTTCATTCCCAGCGCCATTTTATTAGGTATTTTGCA
CGGGCTTGAACCAGGGCACTCCAAAACTATGATGGCGGCTTTTATCATTGCCATTAAAGGTACGGTTAAACAGGCCGTCA
TGCTCGGTCTGGCAGCAACGCTTTCTCATACCGCGATCGTCTGGTTAATCGCGCTGGGTGGGATGTATCTTAGCCGGGCA
TTCACCGCACAATCAGTGGAACCATGGCTGCAGTTAATTTCTGCGATTATTATTCTGAGCACCGCGTGCTGGATGTTCTG
GCGGACATGGCGAGGCGAGCAGCAGTGGCTGGCGGGAAACCACCATCACGACCACGACCACGACCACGACCACGACCACG
ACCACGACCACGACCACGACCACGACCATCATGGTCACATACATCCGGAAGGCGCAACGTCAAAAGCGTATCAGGATGCC
CATGAACTTGCCCATGCTGCCGATATTCAACGCCGTTTTGATGGTCAAACAGTGACTAATGGACAGATCCTGCTGTTCGG
CCTGACCGGAGGGCTTATCCCCTGTCCGGCTGCGATCACCGTTTTACTGATTTGTATCCAGCTTAAAGCGTTTACGCTGG
GCGCCACGATGGTGCTGAGCTTTAGTCTTGGCCTGGCATTAACGCTGGTGACGGTAGGCGTGGGCGCGGCGATAAGCGTT
CAACAGGCAGCAAAGCGCTGGAGTGGTTTTTCGACGCTTGCCCGGCGGGCGCCCTATTTTTCGAGCATTCTGATTGGTCT
GGTCGGCGTGTATATGGGAATTCATGGCTATACCGGGATCATGCAGTAA

Upstream 100 bases:

>100_bases
ACGAATACAAATTATAGCATTACGATGCTACTGGGGGGTAGTATTCCATACTGGGGGGGAGTAGAATGACACCCACATAA
AACAACTAAGAATCATTCTC

Downstream 100 bases:

>100_bases
ATATGTAACGCTTCTGCTCAGGCCGTATCATTCACTTCGGGTTTCATTCCAGAAGCGTTTTTACTTATCAAACGGTATGA
AAGGCCATACATTCAGCGTC

Product: nickel/cobalt efflux protein RcnA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 282; Mature: 281

Protein sequence:

>282_residues
MGEFSTLLQQGNGWFFIPSAILLGILHGLEPGHSKTMMAAFIIAIKGTVKQAVMLGLAATLSHTAIVWLIALGGMYLSRA
FTAQSVEPWLQLISAIIILSTACWMFWRTWRGEQQWLAGNHHHDHDHDHDHDHDHDHDHDHDHHGHIHPEGATSKAYQDA
HELAHAADIQRRFDGQTVTNGQILLFGLTGGLIPCPAAITVLLICIQLKAFTLGATMVLSFSLGLALTLVTVGVGAAISV
QQAAKRWSGFSTLARRAPYFSSILIGLVGVYMGIHGYTGIMQ

Sequences:

>Translated_282_residues
MGEFSTLLQQGNGWFFIPSAILLGILHGLEPGHSKTMMAAFIIAIKGTVKQAVMLGLAATLSHTAIVWLIALGGMYLSRA
FTAQSVEPWLQLISAIIILSTACWMFWRTWRGEQQWLAGNHHHDHDHDHDHDHDHDHDHDHDHHGHIHPEGATSKAYQDA
HELAHAADIQRRFDGQTVTNGQILLFGLTGGLIPCPAAITVLLICIQLKAFTLGATMVLSFSLGLALTLVTVGVGAAISV
QQAAKRWSGFSTLARRAPYFSSILIGLVGVYMGIHGYTGIMQ
>Mature_281_residues
GEFSTLLQQGNGWFFIPSAILLGILHGLEPGHSKTMMAAFIIAIKGTVKQAVMLGLAATLSHTAIVWLIALGGMYLSRAF
TAQSVEPWLQLISAIIILSTACWMFWRTWRGEQQWLAGNHHHDHDHDHDHDHDHDHDHDHDHHGHIHPEGATSKAYQDAH
ELAHAADIQRRFDGQTVTNGQILLFGLTGGLIPCPAAITVLLICIQLKAFTLGATMVLSFSLGLALTLVTVGVGAAISVQ
QAAKRWSGFSTLARRAPYFSSILIGLVGVYMGIHGYTGIMQ

Specific function: Efflux system for nickel and cobalt [H]

COG id: COG2215

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NiCoT transporter (TC 2.A.52) family. RcnA subfamily [H]

Homologues:

Organism=Escherichia coli, GI1788423, Length=282, Percent_Identity=76.2411347517731, Blast_Score=405, Evalue=1e-114,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011541 [H]

Pfam domain/function: PF03824 NicO [H]

EC number: NA

Molecular weight: Translated: 30742; Mature: 30611

Theoretical pI: Translated: 7.02; Mature: 7.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGEFSTLLQQGNGWFFIPSAILLGILHGLEPGHSKTMMAAFIIAIKGTVKQAVMLGLAAT
CCHHHHHHHCCCCCEEHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSHTAIVWLIALGGMYLSRAFTAQSVEPWLQLISAIIILSTACWMFWRTWRGEQQWLAGN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCC
HHHDHDHDHDHDHDHDHDHDHDHHGHIHPEGATSKAYQDAHELAHAADIQRRFDGQTVTN
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECC
GQILLFGLTGGLIPCPAAITVLLICIQLKAFTLGATMVLSFSLGLALTLVTVGVGAAISV
CEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
QQAAKRWSGFSTLARRAPYFSSILIGLVGVYMGIHGYTGIMQ
HHHHHHHCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GEFSTLLQQGNGWFFIPSAILLGILHGLEPGHSKTMMAAFIIAIKGTVKQAVMLGLAAT
CHHHHHHHCCCCCEEHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSHTAIVWLIALGGMYLSRAFTAQSVEPWLQLISAIIILSTACWMFWRTWRGEQQWLAGN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCC
HHHDHDHDHDHDHDHDHDHDHDHHGHIHPEGATSKAYQDAHELAHAADIQRRFDGQTVTN
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECC
GQILLFGLTGGLIPCPAAITVLLICIQLKAFTLGATMVLSFSLGLALTLVTVGVGAAISV
CEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
QQAAKRWSGFSTLARRAPYFSSILIGLVGVYMGIHGYTGIMQ
HHHHHHHCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA