| Definition | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 chromosome, complete genome. |
|---|---|
| Accession | NC_011094 |
| Length | 4,709,075 |
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The map label for this gene is aegA [H]
Identifier: 194737239
GI number: 194737239
Start: 2589296
End: 2591257
Strand: Reverse
Name: aegA [H]
Synonym: SeSA_A2712
Alternate gene names: 194737239
Gene position: 2591257-2589296 (Counterclockwise)
Preceding gene: 194734085
Following gene: 194734362
Centisome position: 55.03
GC content: 58.56
Gene sequence:
>1962_bases ATGAATCGTTTTATTATGGCCAATAGCCAGCAGTGTCTGGGCTGCCATGCCTGCGAGGTCGCCTGCGTAATGGCTCACAA TGATGAGCGACATGTCCTGACGTCACAGCGCTATCAGCCCCGAATTACTGTCATCAAACATCAGCACCAGCGCAGCGCGG TCACATGTCACCATTGCGAAGATGCGCCCTGCGCCCGTAGCTGTCCGAACGGCGCGATCGCGCATATTAACAACAGCGTG CAGGTCAATGCGCAGAAGTGCATCGGCTGTAAATCCTGCGTCGTCGCCTGCCCATTCGGCACCATGCAGATGGTATTGAC GCCCGTCGCGCCAAACCAGTTCAAAGCCAGCGCGCATAAATGCGATCTGTGTCAGGGACGTGAACAGGGTCCGGCCTGCG TGGAAAATTGCCCGGCGGATGCGCTGCAACTGGTCACCGAAGACTCGTTGACCCGTCTGGCTAAAACGCGACGGCTGCGT ACCGCCCGGCAGGAGATTCGCCCCTGGCATACCGTGGATACACAACACAGTGGGACAGCAAGCAGCAAAGTCGAGCGTAT GCAGGCGACGCCGCCACGCGGCGAACCGGATAAACTGGCGATTGAAGCGCGTAAAACCACCTTTGAGGAAATTTATCTGC CGTTTCGCGCCGCGCAGGCCGAGCGTGAAGCGTCCCGCTGCCTCACATGCGGGGAACACAGTATCTGCGAATGGACCTGT CCTCTGCATAACCATATTCCCCAGTGGATCGAACTGGTGAAAGCCGGCGATATTGATGCGGCGGTAGAGCTTTCCCACCA GACCAACTGCCTGCCGGAAATTACCGGGCGCGTCTGTCCGCAGGACCGGCTATGCGAAGGCGCGTGTACACTCCGCGATG AGTATGGCGCGGTTACCATCGGCAACATTGAGCGCTATATCTCCGATCGCGCTCTGAGCAAAGGCTGGCGTCCCGACCTG TCGGACGTACAGAAGAGCGATAAGCGCGTGGCGATTATCGGCGCGGGGCCGGCAGGTCTTGCCTGCGCTGACGTGCTGGC GCGCCATGGCGTAAGCGCCACCGTCTACGATCGCCACCCGGAAATCGGCGGTTTGCTCACCTTTGGTATTCCGGCTTTCA AACTGGATAAATCTCTGCTGGCGCGCCGTCGGGAAATCTTCAGCGCGATGGGGATTCGTTTCGAGCTTAACTGCGAAGTA GGGAAAGATATTTCTCTGGAGACGCTGCTGGAGAGTTATGACGCCGTCTTTGTCGGGGTAGGAACCTACCGTTCCATGAA GGCTGATTTACCGAATGAAGACGCGCCGGGGGTATATGATGCGTTGCCATTCCTCATCGCCAATACCAAACAGGTGATGG GGCTTCCGGCGTTGCCTGACGAGCCGTTTATTGATACTGCGGGCCTTAACGTGGTTGTGCTGGGCGGCGGTGACACCGCA ATGGACTGCGTACGTACGGCGCTGCGTCATGGCGCTGCCAACGTCACCTGCGCTTATCGCCGTGATGAGGCCAATATGCC GGGGTCGAAAAAAGAGGTGAAAAACGCGCGGGAAGAGGGCGCGAACTTTGAATTTAACGTTCAGCCGGTTGAGTTGGTGC TGGATACGCACGGGCGCGTCAGCGGTATTCGCTTTTTGCGTACGCGGCTTGGCGAACCGGATGGTCAGGGGCGACGCCGT CCGGTACCTGTACCGGACAGCGAGTTCGTGATGCCGGCGGATGCGGTCATTATGGCGTTTGGTTTTCATCCGCATGGTAT GTCGTGGCTGGAATCGCATGGCGTGAAGGTGGATAACTGGGGACGTATTGCCGCCAGCGTCGAGAGCGAGTTTCGTTACC AGACGTCCAACCCGAAAATTTTCGCCGGCGGCGATGCGGTGCGCGGCGCCGATCTGGTGGTGACGGCGATGGCAGAAGGC CGACATGCCGCGCAGGGGATACTCGACTGGTTAGCTAAATAA
Upstream 100 bases:
>100_bases TGCTTCCTGGGCAGATGAACATTGCCGACCCCGCCTTCGTCAGTTAATAACAATGCTCATATAAAGAATAAGGTTTTTAC AACCAAAACAGAAGGATGCC
Downstream 100 bases:
>100_bases GCGTATTTGTAGGCCGGTTAAGGCCTGGAACGGTTAAATGATTGAGTGATAAAAAATCTTAAACTTATTGGCTAACCTTA CTCCGTTTGCAGAAATGTTG
Product: putative oxidoreductase Fe-S binding subunit
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 653; Mature: 653
Protein sequence:
>653_residues MNRFIMANSQQCLGCHACEVACVMAHNDERHVLTSQRYQPRITVIKHQHQRSAVTCHHCEDAPCARSCPNGAIAHINNSV QVNAQKCIGCKSCVVACPFGTMQMVLTPVAPNQFKASAHKCDLCQGREQGPACVENCPADALQLVTEDSLTRLAKTRRLR TARQEIRPWHTVDTQHSGTASSKVERMQATPPRGEPDKLAIEARKTTFEEIYLPFRAAQAEREASRCLTCGEHSICEWTC PLHNHIPQWIELVKAGDIDAAVELSHQTNCLPEITGRVCPQDRLCEGACTLRDEYGAVTIGNIERYISDRALSKGWRPDL SDVQKSDKRVAIIGAGPAGLACADVLARHGVSATVYDRHPEIGGLLTFGIPAFKLDKSLLARRREIFSAMGIRFELNCEV GKDISLETLLESYDAVFVGVGTYRSMKADLPNEDAPGVYDALPFLIANTKQVMGLPALPDEPFIDTAGLNVVVLGGGDTA MDCVRTALRHGAANVTCAYRRDEANMPGSKKEVKNAREEGANFEFNVQPVELVLDTHGRVSGIRFLRTRLGEPDGQGRRR PVPVPDSEFVMPADAVIMAFGFHPHGMSWLESHGVKVDNWGRIAASVESEFRYQTSNPKIFAGGDAVRGADLVVTAMAEG RHAAQGILDWLAK
Sequences:
>Translated_653_residues MNRFIMANSQQCLGCHACEVACVMAHNDERHVLTSQRYQPRITVIKHQHQRSAVTCHHCEDAPCARSCPNGAIAHINNSV QVNAQKCIGCKSCVVACPFGTMQMVLTPVAPNQFKASAHKCDLCQGREQGPACVENCPADALQLVTEDSLTRLAKTRRLR TARQEIRPWHTVDTQHSGTASSKVERMQATPPRGEPDKLAIEARKTTFEEIYLPFRAAQAEREASRCLTCGEHSICEWTC PLHNHIPQWIELVKAGDIDAAVELSHQTNCLPEITGRVCPQDRLCEGACTLRDEYGAVTIGNIERYISDRALSKGWRPDL SDVQKSDKRVAIIGAGPAGLACADVLARHGVSATVYDRHPEIGGLLTFGIPAFKLDKSLLARRREIFSAMGIRFELNCEV GKDISLETLLESYDAVFVGVGTYRSMKADLPNEDAPGVYDALPFLIANTKQVMGLPALPDEPFIDTAGLNVVVLGGGDTA MDCVRTALRHGAANVTCAYRRDEANMPGSKKEVKNAREEGANFEFNVQPVELVLDTHGRVSGIRFLRTRLGEPDGQGRRR PVPVPDSEFVMPADAVIMAFGFHPHGMSWLESHGVKVDNWGRIAASVESEFRYQTSNPKIFAGGDAVRGADLVVTAMAEG RHAAQGILDWLAK >Mature_653_residues MNRFIMANSQQCLGCHACEVACVMAHNDERHVLTSQRYQPRITVIKHQHQRSAVTCHHCEDAPCARSCPNGAIAHINNSV QVNAQKCIGCKSCVVACPFGTMQMVLTPVAPNQFKASAHKCDLCQGREQGPACVENCPADALQLVTEDSLTRLAKTRRLR TARQEIRPWHTVDTQHSGTASSKVERMQATPPRGEPDKLAIEARKTTFEEIYLPFRAAQAEREASRCLTCGEHSICEWTC PLHNHIPQWIELVKAGDIDAAVELSHQTNCLPEITGRVCPQDRLCEGACTLRDEYGAVTIGNIERYISDRALSKGWRPDL SDVQKSDKRVAIIGAGPAGLACADVLARHGVSATVYDRHPEIGGLLTFGIPAFKLDKSLLARRREIFSAMGIRFELNCEV GKDISLETLLESYDAVFVGVGTYRSMKADLPNEDAPGVYDALPFLIANTKQVMGLPALPDEPFIDTAGLNVVVLGGGDTA MDCVRTALRHGAANVTCAYRRDEANMPGSKKEVKNAREEGANFEFNVQPVELVLDTHGRVSGIRFLRTRLGEPDGQGRRR PVPVPDSEFVMPADAVIMAFGFHPHGMSWLESHGVKVDNWGRIAASVESEFRYQTSNPKIFAGGDAVRGADLVVTAMAEG RHAAQGILDWLAK
Specific function: Unknown
COG id: COG0493
COG function: function code ER; NADPH-dependent glutamate synthase beta chain and related oxidoreductases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 4 4Fe-4S ferredoxin-type domains [H]
Homologues:
Organism=Homo sapiens, GI119943098, Length=503, Percent_Identity=29.2246520874751, Blast_Score=167, Evalue=4e-41, Organism=Escherichia coli, GI1788811, Length=652, Percent_Identity=85.1226993865031, Blast_Score=1170, Evalue=0.0, Organism=Escherichia coli, GI87082180, Length=649, Percent_Identity=54.6995377503852, Blast_Score=723, Evalue=0.0, Organism=Escherichia coli, GI1789606, Length=459, Percent_Identity=65.5773420479303, Blast_Score=643, Evalue=0.0, Organism=Escherichia coli, GI1788468, Length=459, Percent_Identity=30.2832244008715, Blast_Score=184, Evalue=2e-47, Organism=Escherichia coli, GI1789067, Length=172, Percent_Identity=48.8372093023256, Blast_Score=160, Evalue=3e-40, Organism=Escherichia coli, GI1789243, Length=420, Percent_Identity=33.3333333333333, Blast_Score=157, Evalue=3e-39, Organism=Escherichia coli, GI87082179, Length=157, Percent_Identity=45.859872611465, Blast_Score=142, Evalue=7e-35, Organism=Escherichia coli, GI2367245, Length=154, Percent_Identity=48.0519480519481, Blast_Score=139, Evalue=7e-34, Organism=Escherichia coli, GI1789079, Length=207, Percent_Identity=36.7149758454106, Blast_Score=129, Evalue=6e-31, Organism=Escherichia coli, GI87082114, Length=188, Percent_Identity=36.1702127659575, Blast_Score=112, Evalue=8e-26, Organism=Escherichia coli, GI1787122, Length=161, Percent_Identity=31.6770186335404, Blast_Score=75, Evalue=1e-14, Organism=Escherichia coli, GI1790326, Length=168, Percent_Identity=29.1666666666667, Blast_Score=74, Evalue=3e-14, Organism=Escherichia coli, GI1787749, Length=174, Percent_Identity=28.1609195402299, Blast_Score=74, Evalue=4e-14, Organism=Escherichia coli, GI2367345, Length=155, Percent_Identity=33.5483870967742, Blast_Score=71, Evalue=2e-13, Organism=Escherichia coli, GI1787872, Length=153, Percent_Identity=31.3725490196078, Blast_Score=70, Evalue=3e-13, Organism=Escherichia coli, GI1789370, Length=201, Percent_Identity=28.3582089552239, Blast_Score=63, Evalue=6e-11, Organism=Escherichia coli, GI226510944, Length=100, Percent_Identity=40, Blast_Score=62, Evalue=1e-10, Organism=Caenorhabditis elegans, GI17570289, Length=476, Percent_Identity=33.1932773109244, Blast_Score=208, Evalue=6e-54, Organism=Caenorhabditis elegans, GI71984108, Length=447, Percent_Identity=31.5436241610738, Blast_Score=149, Evalue=4e-36, Organism=Caenorhabditis elegans, GI17543860, Length=162, Percent_Identity=32.0987654320988, Blast_Score=86, Evalue=5e-17, Organism=Saccharomyces cerevisiae, GI6320030, Length=471, Percent_Identity=33.9702760084926, Blast_Score=223, Evalue=5e-59, Organism=Drosophila melanogaster, GI28574881, Length=468, Percent_Identity=36.3247863247863, Blast_Score=258, Evalue=8e-69, Organism=Drosophila melanogaster, GI24665539, Length=468, Percent_Identity=36.3247863247863, Blast_Score=258, Evalue=8e-69, Organism=Drosophila melanogaster, GI24665547, Length=468, Percent_Identity=36.3247863247863, Blast_Score=258, Evalue=1e-68, Organism=Drosophila melanogaster, GI24665543, Length=468, Percent_Identity=36.3247863247863, Blast_Score=258, Evalue=1e-68, Organism=Drosophila melanogaster, GI24640763, Length=461, Percent_Identity=29.7180043383948, Blast_Score=155, Evalue=6e-38, Organism=Drosophila melanogaster, GI18858217, Length=461, Percent_Identity=29.7180043383948, Blast_Score=155, Evalue=6e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001450 - InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR013027 - InterPro: IPR012285 - InterPro: IPR006006 [H]
Pfam domain/function: PF00037 Fer4; PF07992 Pyr_redox_2 [H]
EC number: NA
Molecular weight: Translated: 71504; Mature: 71504
Theoretical pI: Translated: 6.98; Mature: 6.98
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 4.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRFIMANSQQCLGCHACEVACVMAHNDERHVLTSQRYQPRITVIKHQHQRSAVTCHHCE CCCEEECCCCCCCCCHHHEEEEEEECCCCCCEECCCCCCCEEEEEEECCCCCCEEEECCC DAPCARSCPNGAIAHINNSVQVNAQKCIGCKSCVVACPFGTMQMVLTPVAPNQFKASAHK CCCHHHCCCCCCEEEECCCEEECHHHHCCCCHHEEECCCCCEEEEEECCCCCCCCCCCCC CDLCQGREQGPACVENCPADALQLVTEDSLTRLAKTRRLRTARQEIRPWHTVDTQHSGTA CHHHCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCH SSKVERMQATPPRGEPDKLAIEARKTTFEEIYLPFRAAQAEREASRCLTCGEHSICEWTC HHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEC PLHNHIPQWIELVKAGDIDAAVELSHQTNCLPEITGRVCPQDRLCEGACTLRDEYGAVTI CHHHCCHHHHHHHHCCCCCCEEEECCCCCCCHHHHCCCCCHHHHCCCHHEEECCCCEEEE GNIERYISDRALSKGWRPDLSDVQKSDKRVAIIGAGPAGLACADVLARHGVSATVYDRHP CCHHHHHHHHHHHCCCCCCHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCEEEEECCCC EIGGLLTFGIPAFKLDKSLLARRREIFSAMGIRFELNCEVGKDISLETLLESYDAVFVGV CCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHCCEEEEEC GTYRSMKADLPNEDAPGVYDALPFLIANTKQVMGLPALPDEPFIDTAGLNVVVLGGGDTA CCCHHHCCCCCCCCCCCHHHHHHHHHCCCHHHCCCCCCCCCCCEECCCCEEEEECCCCHH MDCVRTALRHGAANVTCAYRRDEANMPGSKKEVKNAREEGANFEFNVQPVELVLDTHGRV HHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCCEEEECCEEEEEEECCCCH SGIRFLRTRLGEPDGQGRRRPVPVPDSEFVMPADAVIMAFGFHPHGMSWLESHGVKVDNW HHHHHHHHHCCCCCCCCCCCCCCCCCCCEECCCCCEEEEECCCCCCCHHHHHCCCEECCC GRIAASVESEFRYQTSNPKIFAGGDAVRGADLVVTAMAEGRHAAQGILDWLAK CHHHHHHHHHHEEECCCCEEEECCCCCCCCCEEEEEECCCCHHHHHHHHHHCC >Mature Secondary Structure MNRFIMANSQQCLGCHACEVACVMAHNDERHVLTSQRYQPRITVIKHQHQRSAVTCHHCE CCCEEECCCCCCCCCHHHEEEEEEECCCCCCEECCCCCCCEEEEEEECCCCCCEEEECCC DAPCARSCPNGAIAHINNSVQVNAQKCIGCKSCVVACPFGTMQMVLTPVAPNQFKASAHK CCCHHHCCCCCCEEEECCCEEECHHHHCCCCHHEEECCCCCEEEEEECCCCCCCCCCCCC CDLCQGREQGPACVENCPADALQLVTEDSLTRLAKTRRLRTARQEIRPWHTVDTQHSGTA CHHHCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCH SSKVERMQATPPRGEPDKLAIEARKTTFEEIYLPFRAAQAEREASRCLTCGEHSICEWTC HHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEC PLHNHIPQWIELVKAGDIDAAVELSHQTNCLPEITGRVCPQDRLCEGACTLRDEYGAVTI CHHHCCHHHHHHHHCCCCCCEEEECCCCCCCHHHHCCCCCHHHHCCCHHEEECCCCEEEE GNIERYISDRALSKGWRPDLSDVQKSDKRVAIIGAGPAGLACADVLARHGVSATVYDRHP CCHHHHHHHHHHHCCCCCCHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCEEEEECCCC EIGGLLTFGIPAFKLDKSLLARRREIFSAMGIRFELNCEVGKDISLETLLESYDAVFVGV CCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHCCEEEEEC GTYRSMKADLPNEDAPGVYDALPFLIANTKQVMGLPALPDEPFIDTAGLNVVVLGGGDTA CCCHHHCCCCCCCCCCCHHHHHHHHHCCCHHHCCCCCCCCCCCEECCCCEEEEECCCCHH MDCVRTALRHGAANVTCAYRRDEANMPGSKKEVKNAREEGANFEFNVQPVELVLDTHGRV HHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCCEEEECCEEEEEEECCCCH SGIRFLRTRLGEPDGQGRRRPVPVPDSEFVMPADAVIMAFGFHPHGMSWLESHGVKVDNW HHHHHHHHHCCCCCCCCCCCCCCCCCCCEECCCCCEEEEECCCCCCCHHHHHCCCEECCC GRIAASVESEFRYQTSNPKIFAGGDAVRGADLVVTAMAEGRHAAQGILDWLAK CHHHHHHHHHHEEECCCCEEEECCCCCCCCCEEEEEECCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8955321; 9205837; 9278503 [H]