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The map label for this gene is yiiM [H]

Identifier: 194737205

GI number: 194737205

Start: 4144278

End: 4144967

Strand: Direct

Name: yiiM [H]

Synonym: SeSA_A4273

Alternate gene names: 194737205

Gene position: 4144278-4144967 (Clockwise)

Preceding gene: 194736704

Following gene: 194735169

Centisome position: 88.01

GC content: 56.81

Gene sequence:

>690_bases
ATGCATTATCCGGTTGACGTGTTTATTGGCAAAATTCGTGACTATGACGGCAGCCGCCCGAGCGCTATCGCCAAGGTGCA
AATCGACGGCGAACTTATGCTGACCGAGCTGGGTCTGGCAGGCGATCAGCAGGCCGAAAAGAAAATCCACGGCGGCCCCG
ACCGCGCGCTATGCCATTACCCCCGTGAACACTATGCTGATTGGATTCGCCAGTTCCCCGAGCAGGCGACGCTGTTTTGC
GCCCCGGCGTTTGGCGAGAATCTGTCGACGGACGGAATGACCGAACACAACGTGTTTATTGGCGATATCTACCGCTGGGG
CGAGGCGTTGATCCAGGTCACTCAGCCGCGCTCTCCATGCTTTAAACTTAATTTCCACTTTGCCATCAGCGACATGGCCC
TCCTTATGCAGAACAGCGGAAAAACCGGCTGGCTGTATCGGGTCATTGCGCCAGGTAAAGTCTCCAGCGATGCGCCGCTG
GAACTGGCGTCGCGTCTGAGCGATGTCTCGATTCATGAAGCGGGTGTTATCGCCTGGTCTATGCCGTTTGATGACGAACA
ATATCATCGGCTGCTGAGCGCCGCCGGGCTGTCGGCGAGCTGGAGCCGCACCATGCAGAAGCGTCGTTTGAGCGGCAAAA
TTGAAGATAGCGCCAGACGGCTGTGGGGTGATAAAACTCCGCCAAAATGA

Upstream 100 bases:

>100_bases
AGCAGCAGCGCGTTTCGCCGCTAAAAAATAATTTGCATTGCACGTCTGTAGAAGCGAGTCTGATGACTCGCTTTTTTTGT
ATCCGCGTAAGGAGCAGCAG

Downstream 100 bases:

>100_bases
AAGGAAGGGTTATGACTGAAGCTGAAAATGCGGTGGCGATCGTAAAAGAATTTTTGGTGGCCTCGATGATTCCTGATGCT
GAACGCGCCGCAACGTATAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 229; Mature: 229

Protein sequence:

>229_residues
MHYPVDVFIGKIRDYDGSRPSAIAKVQIDGELMLTELGLAGDQQAEKKIHGGPDRALCHYPREHYADWIRQFPEQATLFC
APAFGENLSTDGMTEHNVFIGDIYRWGEALIQVTQPRSPCFKLNFHFAISDMALLMQNSGKTGWLYRVIAPGKVSSDAPL
ELASRLSDVSIHEAGVIAWSMPFDDEQYHRLLSAAGLSASWSRTMQKRRLSGKIEDSARRLWGDKTPPK

Sequences:

>Translated_229_residues
MHYPVDVFIGKIRDYDGSRPSAIAKVQIDGELMLTELGLAGDQQAEKKIHGGPDRALCHYPREHYADWIRQFPEQATLFC
APAFGENLSTDGMTEHNVFIGDIYRWGEALIQVTQPRSPCFKLNFHFAISDMALLMQNSGKTGWLYRVIAPGKVSSDAPL
ELASRLSDVSIHEAGVIAWSMPFDDEQYHRLLSAAGLSASWSRTMQKRRLSGKIEDSARRLWGDKTPPK
>Mature_229_residues
MHYPVDVFIGKIRDYDGSRPSAIAKVQIDGELMLTELGLAGDQQAEKKIHGGPDRALCHYPREHYADWIRQFPEQATLFC
APAFGENLSTDGMTEHNVFIGDIYRWGEALIQVTQPRSPCFKLNFHFAISDMALLMQNSGKTGWLYRVIAPGKVSSDAPL
ELASRLSDVSIHEAGVIAWSMPFDDEQYHRLLSAAGLSASWSRTMQKRRLSGKIEDSARRLWGDKTPPK

Specific function: Unknown

COG id: COG2258

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 MOSC domain [H]

Homologues:

Organism=Escherichia coli, GI87082350, Length=223, Percent_Identity=78.47533632287, Blast_Score=383, Evalue=1e-108,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005163
- InterPro:   IPR005302
- InterPro:   IPR015808
- InterPro:   IPR011037 [H]

Pfam domain/function: PF03475 3-alpha; PF03473 MOSC [H]

EC number: NA

Molecular weight: Translated: 25706; Mature: 25706

Theoretical pI: Translated: 6.95; Mature: 6.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHYPVDVFIGKIRDYDGSRPSAIAKVQIDGELMLTELGLAGDQQAEKKIHGGPDRALCHY
CCCCHHHHEEHHCCCCCCCCCEEEEEEECCEEEEEECCCCCCHHHHHHHCCCCCCHHHCC
PREHYADWIRQFPEQATLFCAPAFGENLSTDGMTEHNVFIGDIYRWGEALIQVTQPRSPC
CHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHEEECCCCCCE
FKLNFHFAISDMALLMQNSGKTGWLYRVIAPGKVSSDAPLELASRLSDVSIHEAGVIAWS
EEEEEEEEHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHCCCCEECCCEEEEE
MPFDDEQYHRLLSAAGLSASWSRTMQKRRLSGKIEDSARRLWGDKTPPK
CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCC
>Mature Secondary Structure
MHYPVDVFIGKIRDYDGSRPSAIAKVQIDGELMLTELGLAGDQQAEKKIHGGPDRALCHY
CCCCHHHHEEHHCCCCCCCCCEEEEEEECCEEEEEECCCCCCHHHHHHHCCCCCCHHHCC
PREHYADWIRQFPEQATLFCAPAFGENLSTDGMTEHNVFIGDIYRWGEALIQVTQPRSPC
CHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHEEECCCCCCE
FKLNFHFAISDMALLMQNSGKTGWLYRVIAPGKVSSDAPLELASRLSDVSIHEAGVIAWS
EEEEEEEEHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHCCCCEECCCEEEEE
MPFDDEQYHRLLSAAGLSASWSRTMQKRRLSGKIEDSARRLWGDKTPPK
CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8346018; 9278503 [H]