Click here to switch to the map view.

The map label for this gene is yacF [C]

Identifier: 194737200

GI number: 194737200

Start: 162351

End: 163094

Strand: Reverse

Name: yacF [C]

Synonym: SeSA_A0156

Alternate gene names: 194737200

Gene position: 163094-162351 (Counterclockwise)

Preceding gene: 194734613

Following gene: 194734113

Centisome position: 3.46

GC content: 53.09

Gene sequence:

>744_bases
ATGCACACCCAGGTCCTATTTGAACACCCTCTCAATGAGAAGATGCGTACGTGGCTGCGCATAGAGTTTTTGATCCAACA
GCTCTCCATCAACCTGCCAATTGCAGACCATGCTGGCGCACTGCATTTTTTCCGTAACATCAGCGATCTACTGGATGTGT
TCGAACGGGGCGAAGTCCGTACCGAACTGCTGAAAGAACTGGAGCGCCAGCAGCGTAAATTACAGGCCTGGGTTGAGGTT
CCCGGCGTCGATCAAGACCGTATTGAAGCCCTGCGCCAGCAGTTAAAATCCGCGGGCAGCGTGCTGATCTCCGCCCCGAG
GATTGGCCAGCAGCTACGCGAAGATCGCTTGATTGCCCTTGTGCGTCAACGCCTAAGTATTCCTGGCGGCTGTTGCAGTT
TCGATTTACCCACTCTGCATATCTGGTTGCACCTACAACAGGCGCAGCGCGACGCCCAGATTGAAAGCTGGCTTGCCAGC
CTGAATCCCCTCACCCAGGCGCTGACTTTGGTACTTGATCTGATCCGTAATTCAGCGCCTTTCCGTAAGCAAACCAGCCT
GAACGGTTTTTATCAGGATAACGGGGACGACGCCGATTTGCTGCGTCTTATGCTGACGCTCGATTCACAACTTTATCCGC
AAATTTCCGGCCATAAGAGCCGTTTTGCCATTCGCTTTATGCCGCTGGATAGTGAAAATGGTCTGGTGCCGGAGCGTCTT
GATTTTGAACTGGCCTGTTGCTAA

Upstream 100 bases:

>100_bases
ATAATAACGGCGCACCGGATGCTATCGCATCAGATGTGGCCCGCCTGCACGCCAGTTATCTTAAGCTCGCGTCGCAGTTT
GTCTCACAGGAAAAACCGTA

Downstream 100 bases:

>100_bases
GGAGTAAAAATGTCTGACGTGACCGTCGTAAACTGTCCGACCTGCGGTAAACCGGTCGTCTGGGGGGAAATTAGCCCCTT
CCGCCCATTTTGTTCTAAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 247; Mature: 247

Protein sequence:

>247_residues
MHTQVLFEHPLNEKMRTWLRIEFLIQQLSINLPIADHAGALHFFRNISDLLDVFERGEVRTELLKELERQQRKLQAWVEV
PGVDQDRIEALRQQLKSAGSVLISAPRIGQQLREDRLIALVRQRLSIPGGCCSFDLPTLHIWLHLQQAQRDAQIESWLAS
LNPLTQALTLVLDLIRNSAPFRKQTSLNGFYQDNGDDADLLRLMLTLDSQLYPQISGHKSRFAIRFMPLDSENGLVPERL
DFELACC

Sequences:

>Translated_247_residues
MHTQVLFEHPLNEKMRTWLRIEFLIQQLSINLPIADHAGALHFFRNISDLLDVFERGEVRTELLKELERQQRKLQAWVEV
PGVDQDRIEALRQQLKSAGSVLISAPRIGQQLREDRLIALVRQRLSIPGGCCSFDLPTLHIWLHLQQAQRDAQIESWLAS
LNPLTQALTLVLDLIRNSAPFRKQTSLNGFYQDNGDDADLLRLMLTLDSQLYPQISGHKSRFAIRFMPLDSENGLVPERL
DFELACC
>Mature_247_residues
MHTQVLFEHPLNEKMRTWLRIEFLIQQLSINLPIADHAGALHFFRNISDLLDVFERGEVRTELLKELERQQRKLQAWVEV
PGVDQDRIEALRQQLKSAGSVLISAPRIGQQLREDRLIALVRQRLSIPGGCCSFDLPTLHIWLHLQQAQRDAQIESWLAS
LNPLTQALTLVLDLIRNSAPFRKQTSLNGFYQDNGDDADLLRLMLTLDSQLYPQISGHKSRFAIRFMPLDSENGLVPERL
DFELACC

Specific function: Unknown

COG id: COG4582

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0289 family [H]

Homologues:

Organism=Escherichia coli, GI1786291, Length=247, Percent_Identity=89.4736842105263, Blast_Score=457, Evalue=1e-130,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009777 [H]

Pfam domain/function: PF07072 DUF1342 [H]

EC number: NA

Molecular weight: Translated: 28426; Mature: 28426

Theoretical pI: Translated: 6.40; Mature: 6.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHTQVLFEHPLNEKMRTWLRIEFLIQQLSINLPIADHAGALHFFRNISDLLDVFERGEVR
CCCCEEHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHH
TELLKELERQQRKLQAWVEVPGVDQDRIEALRQQLKSAGSVLISAPRIGQQLREDRLIAL
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHH
VRQRLSIPGGCCSFDLPTLHIWLHLQQAQRDAQIESWLASLNPLTQALTLVLDLIRNSAP
HHHHHCCCCCCCCCCCCHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
FRKQTSLNGFYQDNGDDADLLRLMLTLDSQLYPQISGHKSRFAIRFMPLDSENGLVPERL
CCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCC
DFELACC
CEEEECC
>Mature Secondary Structure
MHTQVLFEHPLNEKMRTWLRIEFLIQQLSINLPIADHAGALHFFRNISDLLDVFERGEVR
CCCCEEHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHH
TELLKELERQQRKLQAWVEVPGVDQDRIEALRQQLKSAGSVLISAPRIGQQLREDRLIAL
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHH
VRQRLSIPGGCCSFDLPTLHIWLHLQQAQRDAQIESWLASLNPLTQALTLVLDLIRNSAP
HHHHHCCCCCCCCCCCCHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
FRKQTSLNGFYQDNGDDADLLRLMLTLDSQLYPQISGHKSRFAIRFMPLDSENGLVPERL
CCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCC
DFELACC
CEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA