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The map label for this gene is ydgK [H]

Identifier: 194737091

GI number: 194737091

Start: 1498913

End: 1499386

Strand: Reverse

Name: ydgK [H]

Synonym: SeSA_A1558

Alternate gene names: 194737091

Gene position: 1499386-1498913 (Counterclockwise)

Preceding gene: 194735660

Following gene: 194737447

Centisome position: 31.84

GC content: 51.69

Gene sequence:

>474_bases
ATGACCGTTAACGCGCGTAACCCCGGAGAAGATATGACTACAACACCGCCACAACGAATTGGAGGCTGGCTTCTTGGCCC
GTTAGCCTGGCTGTTAGTCGCGTTGTTGAGCGCCTCGCTGGCGTTATTACTCTACGTTATGGCGCTTGCCACACCGCAAA
CGTTCAAGACGCTTAGCGGACAGGAAACCGGTAATTTACTGCTATGGGGCATTTCATTTATTACCGCTATCGCCATGTGG
TACTATACCCTGTGGTTGACGATCGCATTCTTCAAGCGCAGACGCTGCGTGCCGAAGCATTACATTATCTGGCTGCTGGT
GTCGGTGTTACTGGCGGTTAAAGCATTTGCCTTTTCGCCCGTCTCAGATGCCTTTGCCGTGCGTCAGTTACTCTTCCCAC
TGTTGGCGACGGCGCTCATTGTGCCTTATCTCAAACGTTCAGCGCGCGTTAAAACAACGTTTGTTAATCCGTAA

Upstream 100 bases:

>100_bases
GATGTAGGTCAGGTTCCGCAATCCGTCTGGCGCTATGTGCAATAAAGAGAGTAGCGTTTAACATCAAAAACCTTATAATA
TTTGCCCCAAAATGAGCGGC

Downstream 100 bases:

>100_bases
TAACCCTACAGTTAACCTGTTGTCGCCTGTGGTAGTTTGACAGATAATAGGCGGCTTTTTTATTTCAGGCCGAAACATGA
CTGATTACCTGCTGCTCTTT

Product: inner membrane protein YdgK

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 157; Mature: 156

Protein sequence:

>157_residues
MTVNARNPGEDMTTTPPQRIGGWLLGPLAWLLVALLSASLALLLYVMALATPQTFKTLSGQETGNLLLWGISFITAIAMW
YYTLWLTIAFFKRRRCVPKHYIIWLLVSVLLAVKAFAFSPVSDAFAVRQLLFPLLATALIVPYLKRSARVKTTFVNP

Sequences:

>Translated_157_residues
MTVNARNPGEDMTTTPPQRIGGWLLGPLAWLLVALLSASLALLLYVMALATPQTFKTLSGQETGNLLLWGISFITAIAMW
YYTLWLTIAFFKRRRCVPKHYIIWLLVSVLLAVKAFAFSPVSDAFAVRQLLFPLLATALIVPYLKRSARVKTTFVNP
>Mature_156_residues
TVNARNPGEDMTTTPPQRIGGWLLGPLAWLLVALLSASLALLLYVMALATPQTFKTLSGQETGNLLLWGISFITAIAMWY
YTLWLTIAFFKRRRCVPKHYIIWLLVSVLLAVKAFAFSPVSDAFAVRQLLFPLLATALIVPYLKRSARVKTTFVNP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To Synechocystis PCC 6803 sll0481 [H]

Homologues:

Organism=Escherichia coli, GI87081948, Length=146, Percent_Identity=82.8767123287671, Blast_Score=201, Evalue=2e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019690 [H]

Pfam domain/function: PF10754 DUF2569 [H]

EC number: NA

Molecular weight: Translated: 17542; Mature: 17411

Theoretical pI: Translated: 10.93; Mature: 10.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVNARNPGEDMTTTPPQRIGGWLLGPLAWLLVALLSASLALLLYVMALATPQTFKTLSG
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCC
QETGNLLLWGISFITAIAMWYYTLWLTIAFFKRRRCVPKHYIIWLLVSVLLAVKAFAFSP
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCC
VSDAFAVRQLLFPLLATALIVPYLKRSARVKTTFVNP
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
TVNARNPGEDMTTTPPQRIGGWLLGPLAWLLVALLSASLALLLYVMALATPQTFKTLSG
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCC
QETGNLLLWGISFITAIAMWYYTLWLTIAFFKRRRCVPKHYIIWLLVSVLLAVKAFAFSP
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCC
VSDAFAVRQLLFPLLATALIVPYLKRSARVKTTFVNP
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]