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The map label for this gene is fliC [H]

Identifier: 194737030

GI number: 194737030

Start: 2024797

End: 2026317

Strand: Reverse

Name: fliC [H]

Synonym: SeSA_A2114

Alternate gene names: 194737030

Gene position: 2026317-2024797 (Counterclockwise)

Preceding gene: 194736415

Following gene: 194736079

Centisome position: 43.03

GC content: 46.88

Gene sequence:

>1521_bases
ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGCAC
CGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTT
TTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATTTCTATTGCGCAGACCACTGAAGGA
GCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACGGTACTAACTCCCAGTC
TGACCTTGACTCTATCCAGGCTGAAATCACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGTCAGACTCAGTTCAACG
GCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATTGATATTGATTTA
AAAGAAATTAGCTCTAAAACACTGGGACTTGATAAGCTTAATGTCCAAGATGCCTACACCCCGAAAGAAACTGCTGTAAC
CGTTGATAAAACTACCTATAAAAATGGTACAGATACTGTTACAGCCCAGAGCAATACTGATATCGAAACTGCAATTGGCG
GTGGTGCAACGGGGGTTACTGGGGCTGATATCAAATTTAAAGATGGTCAATACTATTTAGATGTTAAAGGCGGTGCTTCT
GCTGGTGTTTATAAAGCCACTTATGATGAAACTACAAAGAAAGTTAATATTGATACGACTGATAAAACTCCGTTAGCAAC
TGCGGAAGCTACAGCTATTCGGGGAACGGCCACTATAACCCACAACCAAATTGCTGAAGTAACAAAAGAGGGTGTTGATA
CGACCACAGTTGCGGCTCAACTTGCTGCTGCAGGGGTTACTGGTGCCGATAAGGACAATACTAGCCTTGTAAAACTATCG
TTTGAGGATAAAAACGGTAAGGTTATTGATGGTGGCTATGCAGTGAAAATGGGCGACGATTTCTATGCCGCTACATATGA
TGAGAAAACAGGTACAATTACTGCTAAAACAACCACTTATACAGATGGTGCTGGCGTTGCTCAAACTGGAGCTGTGAAAT
TTGGTGGCGCAAATGGTAAATCTGAAGTTGTTACTGCTACCGATGGTAAAACTTACTTAGCAAGCGACCTTGACAAACAT
AACTTCAGAACAGGCGGTGAGCTTAAAGAGGTTAATACAGATAAGACTGAAAACCCACTGCAGAAAATTGATGCTGCCTT
GGCACAGGTTGATACACTTCGTTCTGACCTGGGTGCGGTACAGAACCGTTTCAACTCCGCTATCACCAACCTGGGCAATA
CCGTAAATAACCTGTCTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTCTCCAACATGTCTCGCGCG
CAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTA
A

Upstream 100 bases:

>100_bases
TTTCTAAAGTTCGAAATTCAGGTGCCGATACAAGGGTTACGGTGAGAAACCGTGGGCAACAGCCCAATAACATCAAGTTG
TAATTGATAAGGAAAAGATC

Downstream 100 bases:

>100_bases
TCCGGCGATTGATTCACCGACACGTGGTACACAATCAAGGCAGCGAAAGCTGCCTTTTTTAATTCCGGAGCCTGTGTAAT
GAAAGAAATCACCGTCACTG

Product: flagellin

Products: NA

Alternate protein names: Phase 1-D flagellin [H]

Number of amino acids: Translated: 506; Mature: 505

Protein sequence:

>506_residues
MAQVINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQASRNANDGISIAQTTEG
ALNEINNNLQRVRELAVQSANGTNSQSDLDSIQAEITQRLNEIDRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDL
KEISSKTLGLDKLNVQDAYTPKETAVTVDKTTYKNGTDTVTAQSNTDIETAIGGGATGVTGADIKFKDGQYYLDVKGGAS
AGVYKATYDETTKKVNIDTTDKTPLATAEATAIRGTATITHNQIAEVTKEGVDTTTVAAQLAAAGVTGADKDNTSLVKLS
FEDKNGKVIDGGYAVKMGDDFYAATYDEKTGTITAKTTTYTDGAGVAQTGAVKFGGANGKSEVVTATDGKTYLASDLDKH
NFRTGGELKEVNTDKTENPLQKIDAALAQVDTLRSDLGAVQNRFNSAITNLGNTVNNLSSARSRIEDSDYATEVSNMSRA
QILQQAGTSVLAQANQVPQNVLSLLR

Sequences:

>Translated_506_residues
MAQVINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQASRNANDGISIAQTTEG
ALNEINNNLQRVRELAVQSANGTNSQSDLDSIQAEITQRLNEIDRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDL
KEISSKTLGLDKLNVQDAYTPKETAVTVDKTTYKNGTDTVTAQSNTDIETAIGGGATGVTGADIKFKDGQYYLDVKGGAS
AGVYKATYDETTKKVNIDTTDKTPLATAEATAIRGTATITHNQIAEVTKEGVDTTTVAAQLAAAGVTGADKDNTSLVKLS
FEDKNGKVIDGGYAVKMGDDFYAATYDEKTGTITAKTTTYTDGAGVAQTGAVKFGGANGKSEVVTATDGKTYLASDLDKH
NFRTGGELKEVNTDKTENPLQKIDAALAQVDTLRSDLGAVQNRFNSAITNLGNTVNNLSSARSRIEDSDYATEVSNMSRA
QILQQAGTSVLAQANQVPQNVLSLLR
>Mature_505_residues
AQVINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQASRNANDGISIAQTTEGA
LNEINNNLQRVRELAVQSANGTNSQSDLDSIQAEITQRLNEIDRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLK
EISSKTLGLDKLNVQDAYTPKETAVTVDKTTYKNGTDTVTAQSNTDIETAIGGGATGVTGADIKFKDGQYYLDVKGGASA
GVYKATYDETTKKVNIDTTDKTPLATAEATAIRGTATITHNQIAEVTKEGVDTTTVAAQLAAAGVTGADKDNTSLVKLSF
EDKNGKVIDGGYAVKMGDDFYAATYDEKTGTITAKTTTYTDGAGVAQTGAVKFGGANGKSEVVTATDGKTYLASDLDKHN
FRTGGELKEVNTDKTENPLQKIDAALAQVDTLRSDLGAVQNRFNSAITNLGNTVNNLSSARSRIEDSDYATEVSNMSRAQ
ILQQAGTSVLAQANQVPQNVLSLLR

Specific function: Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella [H]

COG id: COG1344

COG function: function code N; Flagellin and related hook-associated proteins

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial flagellin family [H]

Homologues:

Organism=Escherichia coli, GI1788232, Length=516, Percent_Identity=55.4263565891473, Blast_Score=432, Evalue=1e-122,

Paralogues:

None

Copy number: 200,000-400,000 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001492
- InterPro:   IPR001029
- InterPro:   IPR014981 [H]

Pfam domain/function: PF00700 Flagellin_C; PF08884 Flagellin_D3; PF00669 Flagellin_N [H]

EC number: NA

Molecular weight: Translated: 53261; Mature: 53130

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQVINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKG
CCEEECCCCEEEEECCCCCHHHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHH
LTQASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANGTNSQSDLDSIQAEITQRL
HHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
NEIDRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKEISSKTLGLDKLNVQDAYT
HHHHHHCCCCCCCCEEEEEECCEEEEEEECCCCCEEEEEHHHHCCHHCCCCCCCCCCCCC
PKETAVTVDKTTYKNGTDTVTAQSNTDIETAIGGGATGVTGADIKFKDGQYYLDVKGGAS
CCCCEEEEECCCCCCCCCEEEECCCCCCHHHCCCCCCCCCCCCEEEECCCEEEEECCCCC
AGVYKATYDETTKKVNIDTTDKTPLATAEATAIRGTATITHNQIAEVTKEGVDTTTVAAQ
CCEEEEECCCCCCEEECCCCCCCCCCCCCHHEECCEEEECHHHHHHHHHCCCCHHHHHHH
LAAAGVTGADKDNTSLVKLSFEDKNGKVIDGGYAVKMGDDFYAATYDEKTGTITAKTTTY
HHHHCCCCCCCCCCEEEEEEEECCCCEEEECCEEEEECCCEEEEEECCCCCEEEEEEEEE
TDGAGVAQTGAVKFGGANGKSEVVTATDGKTYLASDLDKHNFRTGGELKEVNTDKTENPL
CCCCCCCCCCCEEECCCCCCCCEEEECCCCEEHHHCCCCCCCCCCCCCEECCCCCCCCHH
QKIDAALAQVDTLRSDLGAVQNRFNSAITNLGNTVNNLSSARSRIEDSDYATEVSNMSRA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
QILQQAGTSVLAQANQVPQNVLSLLR
HHHHHHCHHHHHHHHCCHHHHHHHHC
>Mature Secondary Structure 
AQVINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKG
CEEECCCCEEEEECCCCCHHHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHH
LTQASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANGTNSQSDLDSIQAEITQRL
HHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
NEIDRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKEISSKTLGLDKLNVQDAYT
HHHHHHCCCCCCCCEEEEEECCEEEEEEECCCCCEEEEEHHHHCCHHCCCCCCCCCCCCC
PKETAVTVDKTTYKNGTDTVTAQSNTDIETAIGGGATGVTGADIKFKDGQYYLDVKGGAS
CCCCEEEEECCCCCCCCCEEEECCCCCCHHHCCCCCCCCCCCCEEEECCCEEEEECCCCC
AGVYKATYDETTKKVNIDTTDKTPLATAEATAIRGTATITHNQIAEVTKEGVDTTTVAAQ
CCEEEEECCCCCCEEECCCCCCCCCCCCCHHEECCEEEECHHHHHHHHHCCCCHHHHHHH
LAAAGVTGADKDNTSLVKLSFEDKNGKVIDGGYAVKMGDDFYAATYDEKTGTITAKTTTY
HHHHCCCCCCCCCCEEEEEEEECCCCEEEECCEEEEECCCEEEEEECCCCCEEEEEEEEE
TDGAGVAQTGAVKFGGANGKSEVVTATDGKTYLASDLDKHNFRTGGELKEVNTDKTENPL
CCCCCCCCCCCEEECCCCCCCCEEEECCCCEEHHHCCCCCCCCCCCCCEECCCCCCCCHH
QKIDAALAQVDTLRSDLGAVQNRFNSAITNLGNTVNNLSSARSRIEDSDYATEVSNMSRA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
QILQQAGTSVLAQANQVPQNVLSLLR
HHHHHHCHHHHHHHHCCHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 4093985 [H]