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The map label for this gene is ybhS [H]

Identifier: 194736982

GI number: 194736982

Start: 936149

End: 937279

Strand: Reverse

Name: ybhS [H]

Synonym: SeSA_A0964

Alternate gene names: 194736982

Gene position: 937279-936149 (Counterclockwise)

Preceding gene: 194738238

Following gene: 194736055

Centisome position: 19.9

GC content: 54.2

Gene sequence:

>1131_bases
ATGAGTAAGTCTCTCTCCTGGCGCCGCGTGCGTGCGTTGTGCGTCAAAGAGACGCGCCAGATCGTGCGCGATCCCAGTAG
CTGGCTGATTGCGGTGGTGATCCCGCTGCTGTTGCTGTTTATTTTTGGTTACGGCATTAACCTTGACTCCAGCAAGCTGC
GGGTGGGGATTCTGCTTGAACAGCAAAGCCAGGAGGCGCTGGATTTCACTCATGCGATGACCGGTTCACCCTATATCGAC
GCGACCATTAGCGATAATCGCCATGAATTAATTGAAAAAATGCAGGCCGGACGCATTCGCGGACTGGTGGTGATTCCGGT
GGATTTCGCGCAGCAAATGGCGCGCGACGGTGACAGCGCGCCGATTCAGGTGATTACCGACGGCAGCGAGCCAAACACCG
CCAACTTCGTTCAGGGTTATGTGGAAGGCATCTGGCAAATCTGGCAACAGCAGCGGGCGGAAGATCGCGGCGACACCTTT
GAACCGCTCATCGACGTCCAGACGCGCTACTGGTTTAACCCGGCGGCGATCAGTCAGCATTTTATTATTCCCGGGGCGGT
GACCATTATCATGACGGTAATTGGCGCAATCCTCACCTCGCTGGTCGTTGCCCGCGAATGGGAGCGCGGCACGATGGAGG
CGCTGCTCTCAACCGAAGTGACGCGTGTTGAACTGCTGCTGTGTAAGCTTATTCCCTATTACTTTCTCGGTATGCTGGCG
ATGCTGCTCTGTATGCTGGTATCGGTGTTTATTCTCGGCGTGCCGTATCGCGGTTCGCTGGTGATTCTGTTTATCATCAC
CAGTCTGTTTTTACTGAGTACGCTGGGGATGGGGCTGTTGATTTCCACCATCACTCGCAACCAGTTTAACGCCGCGCAGG
TGGCGCTGAACGCCGCCTTTTTGCCATCGATTATGCTGTCCGGATTTATCTTCCAGATAGACAGTATGCCTGCGGTGATC
CGCGCGGTGACCTATATTATTCCGGCGCGCTATTTTGTTAGCACCCTGCAAAGTCTGTTTCTGGCCGGCAATATTCCGGT
CGTGTTAGGCGTTAACGTACTGTTTTTAATCGCCTCGGCGGTGATGTTTATTGGCCTGACGTGGCTAAAAACCAAACGAC
GACTGGATTAA

Upstream 100 bases:

>100_bases
GACGATCTCAAAGCGCAGGCCGCCGATGAGCAACAGGCCGATCCGACGATGGAGCAGGCCTTTATCACTCTCATCAATGA
CTGGGATAAGGAGCATACGC

Downstream 100 bases:

>100_bases
CTCTGGCGCTCGTATTTTGCCCGGTGGCGCTATGCTTACCGGGCCTACGGGCCATGTAGGTCGGGTTAGCGTAGCGCCAC
CCGACATGAGGAAGGTTCTA

Product: inner membrane transport permease YbhS

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 376; Mature: 375

Protein sequence:

>376_residues
MSKSLSWRRVRALCVKETRQIVRDPSSWLIAVVIPLLLLFIFGYGINLDSSKLRVGILLEQQSQEALDFTHAMTGSPYID
ATISDNRHELIEKMQAGRIRGLVVIPVDFAQQMARDGDSAPIQVITDGSEPNTANFVQGYVEGIWQIWQQQRAEDRGDTF
EPLIDVQTRYWFNPAAISQHFIIPGAVTIIMTVIGAILTSLVVAREWERGTMEALLSTEVTRVELLLCKLIPYYFLGMLA
MLLCMLVSVFILGVPYRGSLVILFIITSLFLLSTLGMGLLISTITRNQFNAAQVALNAAFLPSIMLSGFIFQIDSMPAVI
RAVTYIIPARYFVSTLQSLFLAGNIPVVLGVNVLFLIASAVMFIGLTWLKTKRRLD

Sequences:

>Translated_376_residues
MSKSLSWRRVRALCVKETRQIVRDPSSWLIAVVIPLLLLFIFGYGINLDSSKLRVGILLEQQSQEALDFTHAMTGSPYID
ATISDNRHELIEKMQAGRIRGLVVIPVDFAQQMARDGDSAPIQVITDGSEPNTANFVQGYVEGIWQIWQQQRAEDRGDTF
EPLIDVQTRYWFNPAAISQHFIIPGAVTIIMTVIGAILTSLVVAREWERGTMEALLSTEVTRVELLLCKLIPYYFLGMLA
MLLCMLVSVFILGVPYRGSLVILFIITSLFLLSTLGMGLLISTITRNQFNAAQVALNAAFLPSIMLSGFIFQIDSMPAVI
RAVTYIIPARYFVSTLQSLFLAGNIPVVLGVNVLFLIASAVMFIGLTWLKTKRRLD
>Mature_375_residues
SKSLSWRRVRALCVKETRQIVRDPSSWLIAVVIPLLLLFIFGYGINLDSSKLRVGILLEQQSQEALDFTHAMTGSPYIDA
TISDNRHELIEKMQAGRIRGLVVIPVDFAQQMARDGDSAPIQVITDGSEPNTANFVQGYVEGIWQIWQQQRAEDRGDTFE
PLIDVQTRYWFNPAAISQHFIIPGAVTIIMTVIGAILTSLVVAREWERGTMEALLSTEVTRVELLLCKLIPYYFLGMLAM
LLCMLVSVFILGVPYRGSLVILFIITSLFLLSTLGMGLLISTITRNQFNAAQVALNAAFLPSIMLSGFIFQIDSMPAVIR
AVTYIIPARYFVSTLQSLFLAGNIPVVLGVNVLFLIASAVMFIGLTWLKTKRRLD

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1787011, Length=372, Percent_Identity=94.0860215053764, Blast_Score=690, Evalue=0.0,
Organism=Escherichia coli, GI48994943, Length=372, Percent_Identity=31.1827956989247, Blast_Score=171, Evalue=8e-44,
Organism=Escherichia coli, GI1787010, Length=335, Percent_Identity=25.0746268656716, Blast_Score=140, Evalue=9e-35,
Organism=Escherichia coli, GI226510979, Length=261, Percent_Identity=27.9693486590038, Blast_Score=85, Evalue=9e-18,
Organism=Drosophila melanogaster, GI24650855, Length=374, Percent_Identity=21.3903743315508, Blast_Score=68, Evalue=8e-12,
Organism=Drosophila melanogaster, GI24650853, Length=374, Percent_Identity=21.3903743315508, Blast_Score=68, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 41937; Mature: 41806

Theoretical pI: Translated: 8.04; Mature: 8.04

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKSLSWRRVRALCVKETRQIVRDPSSWLIAVVIPLLLLFIFGYGINLDSSKLRVGILLE
CCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEE
QQSQEALDFTHAMTGSPYIDATISDNRHELIEKMQAGRIRGLVVIPVDFAQQMARDGDSA
CCHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHCCCCCCEEEECHHHHHHHHCCCCCC
PIQVITDGSEPNTANFVQGYVEGIWQIWQQQRAEDRGDTFEPLIDVQTRYWFNPAAISQH
CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHEECHHHHCCC
FIIPGAVTIIMTVIGAILTSLVVAREWERGTMEALLSTEVTRVELLLCKLIPYYFLGMLA
EECHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MLLCMLVSVFILGVPYRGSLVILFIITSLFLLSTLGMGLLISTITRNQFNAAQVALNAAF
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
LPSIMLSGFIFQIDSMPAVIRAVTYIIPARYFVSTLQSLFLAGNIPVVLGVNVLFLIASA
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
VMFIGLTWLKTKRRLD
HHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SKSLSWRRVRALCVKETRQIVRDPSSWLIAVVIPLLLLFIFGYGINLDSSKLRVGILLE
CCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEE
QQSQEALDFTHAMTGSPYIDATISDNRHELIEKMQAGRIRGLVVIPVDFAQQMARDGDSA
CCHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHCCCCCCEEEECHHHHHHHHCCCCCC
PIQVITDGSEPNTANFVQGYVEGIWQIWQQQRAEDRGDTFEPLIDVQTRYWFNPAAISQH
CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHEECHHHHCCC
FIIPGAVTIIMTVIGAILTSLVVAREWERGTMEALLSTEVTRVELLLCKLIPYYFLGMLA
EECHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MLLCMLVSVFILGVPYRGSLVILFIITSLFLLSTLGMGLLISTITRNQFNAAQVALNAAF
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
LPSIMLSGFIFQIDSMPAVIRAVTYIIPARYFVSTLQSLFLAGNIPVVLGVNVLFLIASA
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
VMFIGLTWLKTKRRLD
HHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]