| Definition | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 chromosome, complete genome. |
|---|---|
| Accession | NC_011094 |
| Length | 4,709,075 |
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The map label for this gene is imp [H]
Identifier: 194736733
GI number: 194736733
Start: 105959
End: 108313
Strand: Reverse
Name: imp [H]
Synonym: SeSA_A0104
Alternate gene names: 194736733
Gene position: 108313-105959 (Counterclockwise)
Preceding gene: 194737271
Following gene: 194736155
Centisome position: 2.3
GC content: 52.82
Gene sequence:
>2355_bases ATGAAAAAACGTATTCCCACTCTTCTGGCCACCATGATCGCCAGCGCCCTTTATAGTCATCAGGGGCTGGCAGCCGATCT CGCCTCACAGTGTATGTTGGGCGTGCCGAGCTACGATCGTCCTCTGGTAAAAGGCGATACCAACGATCTGCCGGTTACTA TCAATGCCGATAACGCTAAAGGTAACTACCCGGACGATGCCGTTTTTACCGGCAACGTGGACATTATGCAGGGGAATAGC CGCCTGCAAGCGGATGAAGTGCAGCTTCATCAGAAGCAGGCGGAAGGTCAGCCGGAACCTGTACGCACCGTCGATGTGCT GGGTAATGTGCATTATGATGACAATCAGGTCATCCTTAAAGGGCCGAAGGGCTGGGCAAACCTGAACACCAAAGACACGA ACGTCTGGGAAGGCGATTACCAGATGGTGGGCCGTCAGGGACGCGGTAAAGCCGATCTCATGAAGCAGCGCGGCGAAAAC CGCTATACCATTCTGGAAAACGGCAGCTTTACCTCCTGTCTGCCTGGCTCCGATACCTGGAGCGTGGTGGGGAGTGAAGT CATCCATGACCGTGAAGAACAGGTTGCGGAGATCTGGAACGCCCGGTTTAAAGTAGGTCCGGTTCCGATCTTTTATAGCC CCTATTTACAGCTCCCCGTCGGTGACAAACGTCGCTCAGGTTTCCTGATCCCGAACGCGAAATACACGACCAAGAACTAT TTCGAGTTCTACTTACCGTATTACTGGAACATCGCGCCCAATATGGACGCCACCATCACCCCGCACTATATGCACCGCCG CGGCAATATTATGTGGGAGAACGAATTCCGTTATCTCACGCAGGCAGGCGCCGGGTTGATGGAATTAGATTATCTGCCTT CTGATAAAGTCTACGAGGACGAACATCCCAAAGAGGGCGATAAGCACCGCTGGTTATTCTACTGGCAGCACTCAGGCGTG ATGGATCAGGTGTGGCGTTTTAACGTCGATTACACCAAAGTCAGCGACTCCAGCTATTTTAATGATTTCGACAGTAAGTA CGGTTCCAGTACCGACGGCTACGCAACGCAGAAATTCAGCGTCGGCTACGCCGTACAAAACTTTGACGCTACGGTGTCGA CCAAACAATTCCAGGTGTTTAACGATCAGAACACCAGCAGCTACTCTGCGGAGCCGCAGTTAGACGTTAACTACTACTAT AACGATCTCGGGCCGTTTGATACCCGGATTTACGGCCAGGCGGTACATTTCGTCAACACCAAAGACAATATGCCGGAAGC GACCCGCGTCCACCTGGAGCCAACCATCAATTTGCCGCTCTCCAACCGCTGGGGCAGCCTGAACACCGAAGCGAAGCTGA TGGCGACGCACTATCAGCAAACGAATCTGGACTGGTACAACGCCAATAACAGCAAAAAACTGGAAGATTCGGTTAACCGC GTCATGCCACAGTTTAAAGTCGACGGTAAGCTCGTCTTCGAACGCGATATGGCGATGCTGGCGCCGGGGTATACCCAGAC GCTGGAACCACGCGTGCAGTACCTGTATGTGCCGTACCGCGACCAGAGCGGCATCTATAACTACGATTCTTCTTTGCTGC AATCCGACTATAACGGCCTGTTCCGCGACCGCACTTATGGCGGTCTCGACCGTATTGCTTCCGCCAACCAGGTCACGACC GGCGTCACAACACGCGTTTATGATGATGCCGCCGTTGAACGTTTTAACGTTTCTGTTGGTCAAATCTACTATTTCACGGA GTCTCGCACCGGCGATGACAACATTAAATGGGAGAATGACGACAAAACCGGTTCGCTGGTTTGGGCAGGCGACACTTACT GGCGTATTTCAGAACGCTGGGGGCTGCGTAGCGGAGTGCAGTACGATACCCGTCTGGATAGCGTCGCTACCAGCAGCAGC AGCCTCGAATACCGTCGGGATCAGGATCGTCTGGTACAGTTGAACTACCGCTATGCCAGCCCGGAATATATTCAGGCTAC GTTGCCTTCGTATTATTCCACGGCAGAGCAGTATAAAAACGGCATCAACCAGGTGGGCGCGGTGGCAAGTTGGCCGATTG CCGATCGCTGGTCGATTGTCGGCGCGTACTACTTCGATACCAATTCGAGCAAACCTGCAGACCAGATGCTCGGCTTGCAG TACAACTCTTGCTGCTATGCGATCCGCGTCGGATACGAACGTAAGCTGAACGGTTGGGATAACGATAAACAACACGCGAT TTATGATAACGCGATTGGCTTCAACATTGAGCTGCGCGGTTTGAGCTCTAACTACGGCCTCGGCACGCAAGAAATGTTGC GTTCGAACATTCTGCCGTACCAAAGCTCTATGTAA
Upstream 100 bases:
>100_bases AAACGGCAGGATTAACACTGGCGCAGCGAAGATGAGTAAGTTAGGCTGTGACCGTTTGTCACGCGCAACGCTACCGATGA TGGAACAATAAATACAACGT
Downstream 100 bases:
>100_bases TCTGATTGATTTACAACGTAATCCGCATTGCGGTTAATTGAAATGGAAAAAGTATGAAGAACTGGAAAACGCTGCTTCTC GGTATCGCCATGATCGCGAA
Product: organic solvent tolerance protein
Products: NA
Alternate protein names: Organic solvent tolerance protein [H]
Number of amino acids: Translated: 784; Mature: 784
Protein sequence:
>784_residues MKKRIPTLLATMIASALYSHQGLAADLASQCMLGVPSYDRPLVKGDTNDLPVTINADNAKGNYPDDAVFTGNVDIMQGNS RLQADEVQLHQKQAEGQPEPVRTVDVLGNVHYDDNQVILKGPKGWANLNTKDTNVWEGDYQMVGRQGRGKADLMKQRGEN RYTILENGSFTSCLPGSDTWSVVGSEVIHDREEQVAEIWNARFKVGPVPIFYSPYLQLPVGDKRRSGFLIPNAKYTTKNY FEFYLPYYWNIAPNMDATITPHYMHRRGNIMWENEFRYLTQAGAGLMELDYLPSDKVYEDEHPKEGDKHRWLFYWQHSGV MDQVWRFNVDYTKVSDSSYFNDFDSKYGSSTDGYATQKFSVGYAVQNFDATVSTKQFQVFNDQNTSSYSAEPQLDVNYYY NDLGPFDTRIYGQAVHFVNTKDNMPEATRVHLEPTINLPLSNRWGSLNTEAKLMATHYQQTNLDWYNANNSKKLEDSVNR VMPQFKVDGKLVFERDMAMLAPGYTQTLEPRVQYLYVPYRDQSGIYNYDSSLLQSDYNGLFRDRTYGGLDRIASANQVTT GVTTRVYDDAAVERFNVSVGQIYYFTESRTGDDNIKWENDDKTGSLVWAGDTYWRISERWGLRSGVQYDTRLDSVATSSS SLEYRRDQDRLVQLNYRYASPEYIQATLPSYYSTAEQYKNGINQVGAVASWPIADRWSIVGAYYFDTNSSKPADQMLGLQ YNSCCYAIRVGYERKLNGWDNDKQHAIYDNAIGFNIELRGLSSNYGLGTQEMLRSNILPYQSSM
Sequences:
>Translated_784_residues MKKRIPTLLATMIASALYSHQGLAADLASQCMLGVPSYDRPLVKGDTNDLPVTINADNAKGNYPDDAVFTGNVDIMQGNS RLQADEVQLHQKQAEGQPEPVRTVDVLGNVHYDDNQVILKGPKGWANLNTKDTNVWEGDYQMVGRQGRGKADLMKQRGEN RYTILENGSFTSCLPGSDTWSVVGSEVIHDREEQVAEIWNARFKVGPVPIFYSPYLQLPVGDKRRSGFLIPNAKYTTKNY FEFYLPYYWNIAPNMDATITPHYMHRRGNIMWENEFRYLTQAGAGLMELDYLPSDKVYEDEHPKEGDKHRWLFYWQHSGV MDQVWRFNVDYTKVSDSSYFNDFDSKYGSSTDGYATQKFSVGYAVQNFDATVSTKQFQVFNDQNTSSYSAEPQLDVNYYY NDLGPFDTRIYGQAVHFVNTKDNMPEATRVHLEPTINLPLSNRWGSLNTEAKLMATHYQQTNLDWYNANNSKKLEDSVNR VMPQFKVDGKLVFERDMAMLAPGYTQTLEPRVQYLYVPYRDQSGIYNYDSSLLQSDYNGLFRDRTYGGLDRIASANQVTT GVTTRVYDDAAVERFNVSVGQIYYFTESRTGDDNIKWENDDKTGSLVWAGDTYWRISERWGLRSGVQYDTRLDSVATSSS SLEYRRDQDRLVQLNYRYASPEYIQATLPSYYSTAEQYKNGINQVGAVASWPIADRWSIVGAYYFDTNSSKPADQMLGLQ YNSCCYAIRVGYERKLNGWDNDKQHAIYDNAIGFNIELRGLSSNYGLGTQEMLRSNILPYQSSM >Mature_784_residues MKKRIPTLLATMIASALYSHQGLAADLASQCMLGVPSYDRPLVKGDTNDLPVTINADNAKGNYPDDAVFTGNVDIMQGNS RLQADEVQLHQKQAEGQPEPVRTVDVLGNVHYDDNQVILKGPKGWANLNTKDTNVWEGDYQMVGRQGRGKADLMKQRGEN RYTILENGSFTSCLPGSDTWSVVGSEVIHDREEQVAEIWNARFKVGPVPIFYSPYLQLPVGDKRRSGFLIPNAKYTTKNY FEFYLPYYWNIAPNMDATITPHYMHRRGNIMWENEFRYLTQAGAGLMELDYLPSDKVYEDEHPKEGDKHRWLFYWQHSGV MDQVWRFNVDYTKVSDSSYFNDFDSKYGSSTDGYATQKFSVGYAVQNFDATVSTKQFQVFNDQNTSSYSAEPQLDVNYYY NDLGPFDTRIYGQAVHFVNTKDNMPEATRVHLEPTINLPLSNRWGSLNTEAKLMATHYQQTNLDWYNANNSKKLEDSVNR VMPQFKVDGKLVFERDMAMLAPGYTQTLEPRVQYLYVPYRDQSGIYNYDSSLLQSDYNGLFRDRTYGGLDRIASANQVTT GVTTRVYDDAAVERFNVSVGQIYYFTESRTGDDNIKWENDDKTGSLVWAGDTYWRISERWGLRSGVQYDTRLDSVATSSS SLEYRRDQDRLVQLNYRYASPEYIQATLPSYYSTAEQYKNGINQVGAVASWPIADRWSIVGAYYFDTNSSKPADQMLGLQ YNSCCYAIRVGYERKLNGWDNDKQHAIYDNAIGFNIELRGLSSNYGLGTQEMLRSNILPYQSSM
Specific function: Together with lptE, is involved in the assembly of LPS in the outer leaflet of the outer membrane. Determines N-hexane tolerance and is involved in outer membrane permeability. Essential for envelope biogenesis [H]
COG id: COG1452
COG function: function code M; Organic solvent tolerance protein OstA
Gene ontology:
Cell location: Cell outer membrane [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the lptD family [H]
Homologues:
Organism=Escherichia coli, GI1786239, Length=784, Percent_Identity=91.5816326530612, Blast_Score=1522, Evalue=0.0,
Paralogues:
None
Copy number: 60 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020889 - InterPro: IPR005653 - InterPro: IPR007543 [H]
Pfam domain/function: PF03968 OstA; PF04453 OstA_C [H]
EC number: NA
Molecular weight: Translated: 89712; Mature: 89712
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKRIPTLLATMIASALYSHQGLAADLASQCMLGVPSYDRPLVKGDTNDLPVTINADNAK CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHEECCCCCCCCEECCCCCCCCEEEECCCCC GNYPDDAVFTGNVDIMQGNSRLQADEVQLHQKQAEGQPEPVRTVDVLGNVHYDDNQVILK CCCCCCCEEECCEEEEECCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECEEECCCEEEEE GPKGWANLNTKDTNVWEGDYQMVGRQGRGKADLMKQRGENRYTILENGSFTSCLPGSDTW CCCCCCCCCCCCCEEECCHHHHCCCCCCCHHHHHHHCCCCCEEEEECCCCCEECCCCCCH SVVGSEVIHDREEQVAEIWNARFKVGPVPIFYSPYLQLPVGDKRRSGFLIPNAKYTTKNY HHHHHHHHHCHHHHHHHHHCCCEEECCEEEEECCEEECCCCCCCCCCEECCCCCCCCCCE FEFYLPYYWNIAPNMDATITPHYMHRRGNIMWENEFRYLTQAGAGLMELDYLPSDKVYED EEEEEEEEEEECCCCCCEECHHHHHHCCCEEEECCHHHHHHCCCCEEEEECCCCCCCCCC EHPKEGDKHRWLFYWQHSGVMDQVWRFNVDYTKVSDSSYFNDFDSKYGSSTDGYATQKFS CCCCCCCCCEEEEEEECCCCHHHHHEECCCEEEECCCCHHCCHHHHCCCCCCCCEEEEEE VGYAVQNFDATVSTKQFQVFNDQNTSSYSAEPQLDVNYYYNDLGPFDTRIYGQAVHFVNT ECEEEECCCCEEECEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEEEEEEEC KDNMPEATRVHLEPTINLPLSNRWGSLNTEAKLMATHYQQTNLDWYNANNSKKLEDSVNR CCCCCCCEEEEEEEEEECCCCCCCCCCCCCEEEEEEEHHHCCCEEEECCCCCHHHHHHHH VMPQFKVDGKLVFERDMAMLAPGYTQTLEPRVQYLYVPYRDQSGIYNYDSSLLQSDYNGL HCCCEECCCEEEEECCHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHCCC FRDRTYGGLDRIASANQVTTGVTTRVYDDAAVERFNVSVGQIYYFTESRTGDDNIKWEND CCCCCCCCHHHHCCCCCEECCCEEEEECCHHHHEECCEEEEEEEEECCCCCCCCCEECCC DKTGSLVWAGDTYWRISERWGLRSGVQYDTRLDSVATSSSSLEYRRDQDRLVQLNYRYAS CCCCCEEECCCCEEEEEHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCEEEEEEEEECC PEYIQATLPSYYSTAEQYKNGINQVGAVASWPIADRWSIVGAYYFDTNSSKPADQMLGLQ CHHEEECCCHHHHHHHHHHHHHHHHCCEECCCCCCCCEEEEEEEEECCCCCCHHHHHCCE YNSCCYAIRVGYERKLNGWDNDKQHAIYDNAIGFNIELRGLSSNYGLGTQEMLRSNILPY ECCEEEEEEECCEEECCCCCCCCCCEEECCCEEEEEEEEECCCCCCCCHHHHHHHCCCCC QSSM CCCC >Mature Secondary Structure MKKRIPTLLATMIASALYSHQGLAADLASQCMLGVPSYDRPLVKGDTNDLPVTINADNAK CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHEECCCCCCCCEECCCCCCCCEEEECCCCC GNYPDDAVFTGNVDIMQGNSRLQADEVQLHQKQAEGQPEPVRTVDVLGNVHYDDNQVILK CCCCCCCEEECCEEEEECCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECEEECCCEEEEE GPKGWANLNTKDTNVWEGDYQMVGRQGRGKADLMKQRGENRYTILENGSFTSCLPGSDTW CCCCCCCCCCCCCEEECCHHHHCCCCCCCHHHHHHHCCCCCEEEEECCCCCEECCCCCCH SVVGSEVIHDREEQVAEIWNARFKVGPVPIFYSPYLQLPVGDKRRSGFLIPNAKYTTKNY HHHHHHHHHCHHHHHHHHHCCCEEECCEEEEECCEEECCCCCCCCCCEECCCCCCCCCCE FEFYLPYYWNIAPNMDATITPHYMHRRGNIMWENEFRYLTQAGAGLMELDYLPSDKVYED EEEEEEEEEEECCCCCCEECHHHHHHCCCEEEECCHHHHHHCCCCEEEEECCCCCCCCCC EHPKEGDKHRWLFYWQHSGVMDQVWRFNVDYTKVSDSSYFNDFDSKYGSSTDGYATQKFS CCCCCCCCCEEEEEEECCCCHHHHHEECCCEEEECCCCHHCCHHHHCCCCCCCCEEEEEE VGYAVQNFDATVSTKQFQVFNDQNTSSYSAEPQLDVNYYYNDLGPFDTRIYGQAVHFVNT ECEEEECCCCEEECEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEEEEEEEC KDNMPEATRVHLEPTINLPLSNRWGSLNTEAKLMATHYQQTNLDWYNANNSKKLEDSVNR CCCCCCCEEEEEEEEEECCCCCCCCCCCCCEEEEEEEHHHCCCEEEECCCCCHHHHHHHH VMPQFKVDGKLVFERDMAMLAPGYTQTLEPRVQYLYVPYRDQSGIYNYDSSLLQSDYNGL HCCCEECCCEEEEECCHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHCCC FRDRTYGGLDRIASANQVTTGVTTRVYDDAAVERFNVSVGQIYYFTESRTGDDNIKWEND CCCCCCCCHHHHCCCCCEECCCEEEEECCHHHHEECCEEEEEEEEECCCCCCCCCEECCC DKTGSLVWAGDTYWRISERWGLRSGVQYDTRLDSVATSSSSLEYRRDQDRLVQLNYRYAS CCCCCEEECCCCEEEEEHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCEEEEEEEEECC PEYIQATLPSYYSTAEQYKNGINQVGAVASWPIADRWSIVGAYYFDTNSSKPADQMLGLQ CHHEEECCCHHHHHHHHHHHHHHHHCCEECCCCCCCCEEEEEEEEECCCCCCHHHHHCCE YNSCCYAIRVGYERKLNGWDNDKQHAIYDNAIGFNIELRGLSSNYGLGTQEMLRSNILPY ECCEEEEEEECCEEECCCCCCCCCCEEECCCEEEEEEEEECCCCCCCCHHHHHHHCCCCC QSSM CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA