BacMap

Definition	Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 chromosome, complete genome.
Accession	NC_011094
Length	4,709,075

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The map label for this gene is dbpA [H]

Identifier: 194736572

GI number: 194736572

Start: 1721468

End: 1722841

Strand: Reverse

Name: dbpA [H]

Synonym: SeSA_A1778

Alternate gene names: 194736572

Gene position: 1722841-1721468 (Counterclockwise)

Preceding gene: 194737020

Following gene: 194736668

Centisome position: 36.59

GC content: 55.02

Gene sequence:

>1374_bases
GTGACCGCTTTTTCAACCCTGAATGTTTTGCCCGCCGCCCAGCTCAATAACCTTACTGAGCTGGGCTATCTTGAGATGAC
GCCTGTTCAGGCCGCAGCATTACCCGTCATTCTGGCGGGAAATGATGTGCGTGTGCAGGCCAGGACCGGTAGCGGCAAAA
CGGCGGCGTTTGGTCTTGGGCTCTTGCATCGAATTGATGTCACTCTGTTCCAGACACAGGCATTAGTGCTGTGTCCGACG
CGGGAGCTGGCGGATCAGGTTGCCGGAGAGTTACGTCGCCTGGCCCGTTTTCTGCCAAATACCAAAATTCTGACCTTGTG
TGGCGGGCAACCCTTTGGCGCACAGCGCGACTCGCTTCAGCACGCTCCGCATATCATTGTCGCGACGCCGGGGCGCCTGC
TGGATCATTTACAAAAAGAAACCGTATCGCTGGATGCGCTGCACATTCTGGTAATGGATGAAGCAGACCGAATGCTGGAC
ATGGGATTCAGTGACGCCATTGATGAGGTGATCCGCTTTGCGCCTGAGACGCGCCAGACGTTATTGTTTTCAGCAACCTG
GCCTGACGCCATTGCGGCGATTAGCGGTCGTGTACAGCAGCAGCCAATACGTATTGAAATCGATACGGTAGATGCGCTAC
CGGCTATCGAACAACAGTTCTTCGAAACGTCTGCGCATGAAAAAATTTCGCTGCTACAAACGTTGCTTAGCCAGCATCAG
CCAGCGTCCTGCGTGGTGTTTTGCAATACCAAAAAAGATTGTCAGGCCGTTTGTGATGCGCTTAATGCGGTAGGACAAAG
CGCGTTGGCGCTCCACGGCGATCTGGAACAACGCGACCGCGACCAGACGTTGGTGCGTTTTGCAAATGGCAGCGCGCGCA
TTCTGGTTGCCACCGACGTTGCCGCGCGAGGGTTAGACATTAAATCGCTCGAACTGGTGGTTAACTATGAGCTGGCCTGG
GACCCGGAGGTGCATGTCCATCGTATTGGCCGTACGGCGCGCGCGGGAAGTAGCGGTCTGGCGATCAGTTTCTGCGCGCC
GGAAGAGGCGCAGCGGGCAAATATTCTTTCAGAAATGCTGCAACTCAAACTGAACTGGCTGAATGCGCCCGCCCGGCAGT
CGTTGCTCCCTCTGGCCGCAGAGATGGCTACCCTATGTATTGACGGCGGCAAAAAAGCGAAAATGCGTCCGGGAGATATT
TTAGGCGCGCTGACCGGCGATATTGGATTAGACGGGGCGGATATCGGCAAAATTAACGTGCATCCCATGCACGTTTACGT
CGCCGTACGTCAAGCAGTAGCGCAAAAAGCCTGGAAGCAGTTGCAAAACGGGAAGATCAAAGGCAAGTCATGCCGGGTAC
GGCTATTAAAATGA

Upstream 100 bases:

>100_bases
CCGCCGCCGGACGAGGAACCGATTAAAATGTCGCATCAAACGCCCGGATCTGCGAGGATACGCGCCTGCTGACTATGAGT
CGTTACCGCGAGAGTAAATT

Downstream 100 bases:

>100_bases
TCGATAGTATGGCGTCTCAGCGGAGTGCTGAGACGCCTGCAGATTATTTCACTTCGATAACATCAAGCCGCAACGCCTCT
AAGGAGGTGTCATCTTCTTC

Product: ATP-dependent RNA helicase DbpA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 457; Mature: 456

Protein sequence:

>457_residues
MTAFSTLNVLPAAQLNNLTELGYLEMTPVQAAALPVILAGNDVRVQARTGSGKTAAFGLGLLHRIDVTLFQTQALVLCPT
RELADQVAGELRRLARFLPNTKILTLCGGQPFGAQRDSLQHAPHIIVATPGRLLDHLQKETVSLDALHILVMDEADRMLD
MGFSDAIDEVIRFAPETRQTLLFSATWPDAIAAISGRVQQQPIRIEIDTVDALPAIEQQFFETSAHEKISLLQTLLSQHQ
PASCVVFCNTKKDCQAVCDALNAVGQSALALHGDLEQRDRDQTLVRFANGSARILVATDVAARGLDIKSLELVVNYELAW
DPEVHVHRIGRTARAGSSGLAISFCAPEEAQRANILSEMLQLKLNWLNAPARQSLLPLAAEMATLCIDGGKKAKMRPGDI
LGALTGDIGLDGADIGKINVHPMHVYVAVRQAVAQKAWKQLQNGKIKGKSCRVRLLK

Sequences:

>Translated_457_residues
MTAFSTLNVLPAAQLNNLTELGYLEMTPVQAAALPVILAGNDVRVQARTGSGKTAAFGLGLLHRIDVTLFQTQALVLCPT
RELADQVAGELRRLARFLPNTKILTLCGGQPFGAQRDSLQHAPHIIVATPGRLLDHLQKETVSLDALHILVMDEADRMLD
MGFSDAIDEVIRFAPETRQTLLFSATWPDAIAAISGRVQQQPIRIEIDTVDALPAIEQQFFETSAHEKISLLQTLLSQHQ
PASCVVFCNTKKDCQAVCDALNAVGQSALALHGDLEQRDRDQTLVRFANGSARILVATDVAARGLDIKSLELVVNYELAW
DPEVHVHRIGRTARAGSSGLAISFCAPEEAQRANILSEMLQLKLNWLNAPARQSLLPLAAEMATLCIDGGKKAKMRPGDI
LGALTGDIGLDGADIGKINVHPMHVYVAVRQAVAQKAWKQLQNGKIKGKSCRVRLLK
>Mature_456_residues
TAFSTLNVLPAAQLNNLTELGYLEMTPVQAAALPVILAGNDVRVQARTGSGKTAAFGLGLLHRIDVTLFQTQALVLCPTR
ELADQVAGELRRLARFLPNTKILTLCGGQPFGAQRDSLQHAPHIIVATPGRLLDHLQKETVSLDALHILVMDEADRMLDM
GFSDAIDEVIRFAPETRQTLLFSATWPDAIAAISGRVQQQPIRIEIDTVDALPAIEQQFFETSAHEKISLLQTLLSQHQP
ASCVVFCNTKKDCQAVCDALNAVGQSALALHGDLEQRDRDQTLVRFANGSARILVATDVAARGLDIKSLELVVNYELAWD
PEVHVHRIGRTARAGSSGLAISFCAPEEAQRANILSEMLQLKLNWLNAPARQSLLPLAAEMATLCIDGGKKAKMRPGDIL
GALTGDIGLDGADIGKINVHPMHVYVAVRQAVAQKAWKQLQNGKIKGKSCRVRLLK

Specific function: Has a helix-destabilizing activity, which is not coupled to the ATPase activity. Can unwind the 23S rRNA as well as 16S rRNA. Exhibits an RNA-dependent ATPase activity, specifically stimulated by bacterial 23S rRNA. Could play a major role in ribosome ass

COG id: COG0513

COG function: function code LKJ; Superfamily II DNA and RNA helicases

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI31542656, Length=377, Percent_Identity=36.8700265251989, Blast_Score=232, Evalue=4e-61,
Organism=Homo sapiens, GI224593278, Length=383, Percent_Identity=37.3368146214099, Blast_Score=228, Evalue=9e-60,
Organism=Homo sapiens, GI7661920, Length=337, Percent_Identity=34.1246290801187, Blast_Score=224, Evalue=1e-58,
Organism=Homo sapiens, GI21071032, Length=350, Percent_Identity=37.4285714285714, Blast_Score=220, Evalue=3e-57,
Organism=Homo sapiens, GI45446747, Length=428, Percent_Identity=34.3457943925234, Blast_Score=219, Evalue=6e-57,
Organism=Homo sapiens, GI45446743, Length=428, Percent_Identity=34.3457943925234, Blast_Score=219, Evalue=6e-57,
Organism=Homo sapiens, GI164664518, Length=356, Percent_Identity=30.3370786516854, Blast_Score=215, Evalue=5e-56,
Organism=Homo sapiens, GI20149629, Length=347, Percent_Identity=35.7348703170029, Blast_Score=213, Evalue=2e-55,
Organism=Homo sapiens, GI262118318, Length=382, Percent_Identity=35.6020942408377, Blast_Score=213, Evalue=4e-55,
Organism=Homo sapiens, GI41327773, Length=358, Percent_Identity=36.0335195530726, Blast_Score=212, Evalue=6e-55,
Organism=Homo sapiens, GI262231852, Length=382, Percent_Identity=35.6020942408377, Blast_Score=211, Evalue=1e-54,
Organism=Homo sapiens, GI13518015, Length=382, Percent_Identity=35.6020942408377, Blast_Score=211, Evalue=1e-54,
Organism=Homo sapiens, GI216548263, Length=382, Percent_Identity=35.6020942408377, Blast_Score=211, Evalue=1e-54,
Organism=Homo sapiens, GI50659095, Length=389, Percent_Identity=33.6760925449871, Blast_Score=211, Evalue=1e-54,
Organism=Homo sapiens, GI222352149, Length=360, Percent_Identity=36.3888888888889, Blast_Score=207, Evalue=2e-53,
Organism=Homo sapiens, GI4758138, Length=366, Percent_Identity=35.792349726776, Blast_Score=206, Evalue=3e-53,
Organism=Homo sapiens, GI301171467, Length=372, Percent_Identity=37.0967741935484, Blast_Score=206, Evalue=4e-53,
Organism=Homo sapiens, GI301171475, Length=372, Percent_Identity=37.0967741935484, Blast_Score=206, Evalue=4e-53,
Organism=Homo sapiens, GI87196351, Length=372, Percent_Identity=37.0967741935484, Blast_Score=206, Evalue=4e-53,
Organism=Homo sapiens, GI148613856, Length=373, Percent_Identity=34.3163538873995, Blast_Score=205, Evalue=6e-53,
Organism=Homo sapiens, GI38201710, Length=373, Percent_Identity=34.3163538873995, Blast_Score=205, Evalue=6e-53,
Organism=Homo sapiens, GI41327771, Length=377, Percent_Identity=34.7480106100796, Blast_Score=205, Evalue=7e-53,
Organism=Homo sapiens, GI169881239, Length=373, Percent_Identity=37.2654155495979, Blast_Score=204, Evalue=2e-52,
Organism=Homo sapiens, GI13514809, Length=373, Percent_Identity=37.2654155495979, Blast_Score=204, Evalue=2e-52,
Organism=Homo sapiens, GI38327634, Length=364, Percent_Identity=36.5384615384615, Blast_Score=202, Evalue=4e-52,
Organism=Homo sapiens, GI13129006, Length=377, Percent_Identity=32.8912466843501, Blast_Score=197, Evalue=1e-50,
Organism=Homo sapiens, GI83700235, Length=351, Percent_Identity=34.4729344729345, Blast_Score=197, Evalue=2e-50,
Organism=Homo sapiens, GI4758112, Length=358, Percent_Identity=30.7262569832402, Blast_Score=196, Evalue=3e-50,
Organism=Homo sapiens, GI18375623, Length=358, Percent_Identity=30.7262569832402, Blast_Score=196, Evalue=3e-50,
Organism=Homo sapiens, GI21040371, Length=349, Percent_Identity=31.5186246418338, Blast_Score=196, Evalue=5e-50,
Organism=Homo sapiens, GI4503529, Length=352, Percent_Identity=34.375, Blast_Score=195, Evalue=6e-50,
Organism=Homo sapiens, GI55749865, Length=355, Percent_Identity=32.112676056338, Blast_Score=194, Evalue=2e-49,
Organism=Homo sapiens, GI188035877, Length=343, Percent_Identity=35.8600583090379, Blast_Score=192, Evalue=8e-49,
Organism=Homo sapiens, GI41327779, Length=393, Percent_Identity=33.8422391857506, Blast_Score=191, Evalue=9e-49,
Organism=Homo sapiens, GI164419743, Length=340, Percent_Identity=36.4705882352941, Blast_Score=190, Evalue=2e-48,
Organism=Homo sapiens, GI51094101, Length=340, Percent_Identity=36.4705882352941, Blast_Score=190, Evalue=2e-48,
Organism=Homo sapiens, GI13514831, Length=379, Percent_Identity=34.5646437994723, Blast_Score=179, Evalue=5e-45,
Organism=Homo sapiens, GI41327776, Length=327, Percent_Identity=33.9449541284404, Blast_Score=172, Evalue=5e-43,
Organism=Homo sapiens, GI256223453, Length=385, Percent_Identity=27.7922077922078, Blast_Score=170, Evalue=2e-42,
Organism=Homo sapiens, GI8922886, Length=372, Percent_Identity=30.6451612903226, Blast_Score=161, Evalue=1e-39,
Organism=Homo sapiens, GI164419732, Length=361, Percent_Identity=29.6398891966759, Blast_Score=161, Evalue=1e-39,
Organism=Homo sapiens, GI6005743, Length=372, Percent_Identity=30.3763440860215, Blast_Score=159, Evalue=6e-39,
Organism=Homo sapiens, GI62241022, Length=352, Percent_Identity=30.9659090909091, Blast_Score=157, Evalue=1e-38,
Organism=Homo sapiens, GI9506931, Length=387, Percent_Identity=29.7157622739018, Blast_Score=155, Evalue=8e-38,
Organism=Homo sapiens, GI62241024, Length=325, Percent_Identity=31.3846153846154, Blast_Score=149, Evalue=5e-36,
Organism=Homo sapiens, GI38569503, Length=355, Percent_Identity=28.169014084507, Blast_Score=134, Evalue=3e-31,
Organism=Homo sapiens, GI38569505, Length=355, Percent_Identity=28.169014084507, Blast_Score=133, Evalue=3e-31,
Organism=Homo sapiens, GI9966805, Length=308, Percent_Identity=33.7662337662338, Blast_Score=132, Evalue=5e-31,
Organism=Homo sapiens, GI4826686, Length=338, Percent_Identity=27.810650887574, Blast_Score=132, Evalue=8e-31,
Organism=Homo sapiens, GI256773275, Length=358, Percent_Identity=30.7262569832402, Blast_Score=128, Evalue=1e-29,
Organism=Homo sapiens, GI154759257, Length=396, Percent_Identity=27.5252525252525, Blast_Score=108, Evalue=1e-23,
Organism=Homo sapiens, GI17505907, Length=217, Percent_Identity=33.1797235023041, Blast_Score=102, Evalue=8e-22,
Organism=Homo sapiens, GI20336298, Length=217, Percent_Identity=33.1797235023041, Blast_Score=101, Evalue=2e-21,
Organism=Escherichia coli, GI1787605, Length=457, Percent_Identity=87.527352297593, Blast_Score=822, Evalue=0.0,
Organism=Escherichia coli, GI87082221, Length=370, Percent_Identity=41.6216216216216, Blast_Score=269, Evalue=2e-73,
Organism=Escherichia coli, GI1787016, Length=386, Percent_Identity=38.0829015544041, Blast_Score=239, Evalue=3e-64,
Organism=Escherichia coli, GI1790214, Length=357, Percent_Identity=38.375350140056, Blast_Score=213, Evalue=1e-56,
Organism=Escherichia coli, GI1788930, Length=338, Percent_Identity=37.8698224852071, Blast_Score=182, Evalue=4e-47,
Organism=Caenorhabditis elegans, GI71995724, Length=339, Percent_Identity=34.8082595870207, Blast_Score=231, Evalue=8e-61,
Organism=Caenorhabditis elegans, GI17507121, Length=355, Percent_Identity=34.3661971830986, Blast_Score=231, Evalue=8e-61,
Organism=Caenorhabditis elegans, GI71987143, Length=340, Percent_Identity=35, Blast_Score=223, Evalue=2e-58,
Organism=Caenorhabditis elegans, GI17555296, Length=331, Percent_Identity=40.1812688821752, Blast_Score=218, Evalue=4e-57,
Organism=Caenorhabditis elegans, GI17510559, Length=366, Percent_Identity=35.2459016393443, Blast_Score=212, Evalue=4e-55,
Organism=Caenorhabditis elegans, GI86570094, Length=349, Percent_Identity=37.5358166189112, Blast_Score=208, Evalue=4e-54,
Organism=Caenorhabditis elegans, GI32565321, Length=376, Percent_Identity=34.8404255319149, Blast_Score=207, Evalue=1e-53,
Organism=Caenorhabditis elegans, GI17507877, Length=401, Percent_Identity=35.4114713216958, Blast_Score=206, Evalue=3e-53,
Organism=Caenorhabditis elegans, GI17510307, Length=354, Percent_Identity=37.8531073446328, Blast_Score=206, Evalue=3e-53,
Organism=Caenorhabditis elegans, GI17507879, Length=387, Percent_Identity=35.1421188630491, Blast_Score=205, Evalue=3e-53,
Organism=Caenorhabditis elegans, GI17510309, Length=354, Percent_Identity=37.8531073446328, Blast_Score=205, Evalue=4e-53,
Organism=Caenorhabditis elegans, GI71995514, Length=354, Percent_Identity=37.8531073446328, Blast_Score=205, Evalue=5e-53,
Organism=Caenorhabditis elegans, GI17552114, Length=350, Percent_Identity=29.4285714285714, Blast_Score=203, Evalue=1e-52,
Organism=Caenorhabditis elegans, GI115533224, Length=396, Percent_Identity=34.8484848484849, Blast_Score=202, Evalue=2e-52,
Organism=Caenorhabditis elegans, GI71995718, Length=369, Percent_Identity=36.8563685636856, Blast_Score=201, Evalue=7e-52,
Organism=Caenorhabditis elegans, GI17507945, Length=356, Percent_Identity=34.8314606741573, Blast_Score=199, Evalue=4e-51,
Organism=Caenorhabditis elegans, GI115532546, Length=354, Percent_Identity=34.7457627118644, Blast_Score=198, Evalue=5e-51,
Organism=Caenorhabditis elegans, GI115532548, Length=358, Percent_Identity=34.3575418994413, Blast_Score=198, Evalue=5e-51,
Organism=Caenorhabditis elegans, GI71982858, Length=358, Percent_Identity=30.1675977653631, Blast_Score=197, Evalue=1e-50,
Organism=Caenorhabditis elegans, GI71999646, Length=337, Percent_Identity=37.0919881305638, Blast_Score=191, Evalue=5e-49,
Organism=Caenorhabditis elegans, GI71999644, Length=337, Percent_Identity=37.0919881305638, Blast_Score=190, Evalue=1e-48,
Organism=Caenorhabditis elegans, GI17537549, Length=351, Percent_Identity=33.6182336182336, Blast_Score=186, Evalue=2e-47,
Organism=Caenorhabditis elegans, GI17505370, Length=367, Percent_Identity=34.8773841961853, Blast_Score=186, Evalue=3e-47,
Organism=Caenorhabditis elegans, GI17536099, Length=391, Percent_Identity=31.4578005115089, Blast_Score=185, Evalue=5e-47,
Organism=Caenorhabditis elegans, GI17536101, Length=391, Percent_Identity=31.4578005115089, Blast_Score=184, Evalue=8e-47,
Organism=Caenorhabditis elegans, GI17507881, Length=363, Percent_Identity=33.0578512396694, Blast_Score=184, Evalue=1e-46,
Organism=Caenorhabditis elegans, GI17552642, Length=347, Percent_Identity=34.0057636887608, Blast_Score=183, Evalue=2e-46,
Organism=Caenorhabditis elegans, GI17536103, Length=391, Percent_Identity=31.4578005115089, Blast_Score=181, Evalue=9e-46,
Organism=Caenorhabditis elegans, GI17553716, Length=326, Percent_Identity=30.6748466257669, Blast_Score=168, Evalue=7e-42,
Organism=Caenorhabditis elegans, GI17509811, Length=347, Percent_Identity=31.4121037463977, Blast_Score=166, Evalue=3e-41,
Organism=Caenorhabditis elegans, GI193206561, Length=327, Percent_Identity=29.6636085626911, Blast_Score=154, Evalue=8e-38,
Organism=Caenorhabditis elegans, GI17556951, Length=388, Percent_Identity=29.8969072164948, Blast_Score=154, Evalue=1e-37,
Organism=Caenorhabditis elegans, GI193208216, Length=399, Percent_Identity=31.328320802005, Blast_Score=149, Evalue=3e-36,
Organism=Caenorhabditis elegans, GI71990816, Length=410, Percent_Identity=30.7317073170732, Blast_Score=145, Evalue=3e-35,
Organism=Caenorhabditis elegans, GI17507641, Length=402, Percent_Identity=30.0995024875622, Blast_Score=140, Evalue=1e-33,
Organism=Caenorhabditis elegans, GI32564046, Length=380, Percent_Identity=30.5263157894737, Blast_Score=131, Evalue=8e-31,
Organism=Caenorhabditis elegans, GI25148203, Length=405, Percent_Identity=26.6666666666667, Blast_Score=130, Evalue=1e-30,
Organism=Caenorhabditis elegans, GI17508543, Length=370, Percent_Identity=28.1081081081081, Blast_Score=130, Evalue=2e-30,
Organism=Caenorhabditis elegans, GI71982862, Length=188, Percent_Identity=31.3829787234043, Blast_Score=117, Evalue=9e-27,
Organism=Caenorhabditis elegans, GI71997889, Length=393, Percent_Identity=27.4809160305344, Blast_Score=107, Evalue=9e-24,
Organism=Caenorhabditis elegans, GI25148205, Length=339, Percent_Identity=26.2536873156342, Blast_Score=106, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI25148291, Length=331, Percent_Identity=27.190332326284, Blast_Score=100, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI71987152, Length=82, Percent_Identity=43.9024390243902, Blast_Score=89, Evalue=5e-18,
Organism=Saccharomyces cerevisiae, GI6323021, Length=362, Percent_Identity=36.7403314917127, Blast_Score=233, Evalue=7e-62,
Organism=Saccharomyces cerevisiae, GI6321856, Length=368, Percent_Identity=38.8586956521739, Blast_Score=226, Evalue=5e-60,
Organism=Saccharomyces cerevisiae, GI6324217, Length=347, Percent_Identity=39.193083573487, Blast_Score=223, Evalue=6e-59,
Organism=Saccharomyces cerevisiae, GI6321360, Length=370, Percent_Identity=37.8378378378378, Blast_Score=214, Evalue=3e-56,
Organism=Saccharomyces cerevisiae, GI6320224, Length=369, Percent_Identity=31.7073170731707, Blast_Score=211, Evalue=2e-55,
Organism=Saccharomyces cerevisiae, GI6320041, Length=329, Percent_Identity=33.1306990881459, Blast_Score=206, Evalue=7e-54,
Organism=Saccharomyces cerevisiae, GI6324778, Length=366, Percent_Identity=36.0655737704918, Blast_Score=201, Evalue=2e-52,
Organism=Saccharomyces cerevisiae, GI6322912, Length=331, Percent_Identity=35.3474320241692, Blast_Score=199, Evalue=7e-52,
Organism=Saccharomyces cerevisiae, GI6322323, Length=331, Percent_Identity=35.3474320241692, Blast_Score=199, Evalue=7e-52,
Organism=Saccharomyces cerevisiae, GI6325138, Length=372, Percent_Identity=35.752688172043, Blast_Score=199, Evalue=1e-51,
Organism=Saccharomyces cerevisiae, GI6323947, Length=347, Percent_Identity=35.1585014409222, Blast_Score=197, Evalue=3e-51,
Organism=Saccharomyces cerevisiae, GI6320119, Length=340, Percent_Identity=32.0588235294118, Blast_Score=196, Evalue=4e-51,
Organism=Saccharomyces cerevisiae, GI6321963, Length=361, Percent_Identity=35.7340720221607, Blast_Score=195, Evalue=2e-50,
Organism=Saccharomyces cerevisiae, GI6324620, Length=366, Percent_Identity=33.0601092896175, Blast_Score=189, Evalue=7e-49,
Organism=Saccharomyces cerevisiae, GI6321111, Length=349, Percent_Identity=32.6647564469914, Blast_Score=185, Evalue=1e-47,
Organism=Saccharomyces cerevisiae, GI6320173, Length=440, Percent_Identity=31.3636363636364, Blast_Score=179, Evalue=7e-46,
Organism=Saccharomyces cerevisiae, GI6320449, Length=405, Percent_Identity=29.3827160493827, Blast_Score=178, Evalue=2e-45,
Organism=Saccharomyces cerevisiae, GI6319618, Length=421, Percent_Identity=29.2161520190024, Blast_Score=176, Evalue=8e-45,
Organism=Saccharomyces cerevisiae, GI6322427, Length=357, Percent_Identity=34.1736694677871, Blast_Score=174, Evalue=2e-44,
Organism=Saccharomyces cerevisiae, GI6319714, Length=414, Percent_Identity=30.1932367149758, Blast_Score=167, Evalue=4e-42,
Organism=Saccharomyces cerevisiae, GI6320400, Length=372, Percent_Identity=29.0322580645161, Blast_Score=151, Evalue=2e-37,
Organism=Saccharomyces cerevisiae, GI6321267, Length=348, Percent_Identity=31.6091954022989, Blast_Score=138, Evalue=2e-33,
Organism=Saccharomyces cerevisiae, GI6323306, Length=414, Percent_Identity=25.6038647342995, Blast_Score=120, Evalue=5e-28,
Organism=Saccharomyces cerevisiae, GI6324366, Length=354, Percent_Identity=25.4237288135593, Blast_Score=105, Evalue=1e-23,
Organism=Saccharomyces cerevisiae, GI6321374, Length=411, Percent_Identity=23.8442822384428, Blast_Score=89, Evalue=1e-18,
Organism=Saccharomyces cerevisiae, GI6322876, Length=160, Percent_Identity=35, Blast_Score=86, Evalue=1e-17,
Organism=Drosophila melanogaster, GI24584399, Length=344, Percent_Identity=38.3720930232558, Blast_Score=232, Evalue=3e-61,
Organism=Drosophila melanogaster, GI24645031, Length=349, Percent_Identity=34.3839541547278, Blast_Score=225, Evalue=4e-59,
Organism=Drosophila melanogaster, GI17136814, Length=361, Percent_Identity=37.9501385041551, Blast_Score=219, Evalue=2e-57,
Organism=Drosophila melanogaster, GI21356161, Length=361, Percent_Identity=36.01108033241, Blast_Score=214, Evalue=8e-56,
Organism=Drosophila melanogaster, GI28574962, Length=398, Percent_Identity=35.678391959799, Blast_Score=213, Evalue=2e-55,
Organism=Drosophila melanogaster, GI24585582, Length=329, Percent_Identity=37.3860182370821, Blast_Score=211, Evalue=8e-55,
Organism=Drosophila melanogaster, GI24642151, Length=350, Percent_Identity=36, Blast_Score=210, Evalue=1e-54,
Organism=Drosophila melanogaster, GI18857967, Length=419, Percent_Identity=34.3675417661098, Blast_Score=208, Evalue=7e-54,
Organism=Drosophila melanogaster, GI28575014, Length=361, Percent_Identity=34.9030470914127, Blast_Score=206, Evalue=2e-53,
Organism=Drosophila melanogaster, GI21355075, Length=361, Percent_Identity=34.6260387811634, Blast_Score=206, Evalue=3e-53,
Organism=Drosophila melanogaster, GI24644483, Length=380, Percent_Identity=34.7368421052632, Blast_Score=205, Evalue=6e-53,
Organism=Drosophila melanogaster, GI24644487, Length=380, Percent_Identity=34.7368421052632, Blast_Score=204, Evalue=7e-53,
Organism=Drosophila melanogaster, GI45551833, Length=380, Percent_Identity=34.7368421052632, Blast_Score=204, Evalue=7e-53,
Organism=Drosophila melanogaster, GI24644485, Length=380, Percent_Identity=34.7368421052632, Blast_Score=204, Evalue=7e-53,
Organism=Drosophila melanogaster, GI281361218, Length=380, Percent_Identity=34.7368421052632, Blast_Score=204, Evalue=7e-53,
Organism=Drosophila melanogaster, GI24644481, Length=380, Percent_Identity=34.7368421052632, Blast_Score=204, Evalue=7e-53,
Organism=Drosophila melanogaster, GI24644479, Length=380, Percent_Identity=34.7368421052632, Blast_Score=204, Evalue=1e-52,
Organism=Drosophila melanogaster, GI17977678, Length=349, Percent_Identity=35.243553008596, Blast_Score=201, Evalue=7e-52,
Organism=Drosophila melanogaster, GI24662330, Length=347, Percent_Identity=37.1757925072046, Blast_Score=201, Evalue=7e-52,
Organism=Drosophila melanogaster, GI24583281, Length=335, Percent_Identity=32.2388059701493, Blast_Score=200, Evalue=2e-51,
Organism=Drosophila melanogaster, GI24583279, Length=335, Percent_Identity=32.2388059701493, Blast_Score=199, Evalue=2e-51,
Organism=Drosophila melanogaster, GI28571808, Length=361, Percent_Identity=35.1800554016621, Blast_Score=199, Evalue=3e-51,
Organism=Drosophila melanogaster, GI28571809, Length=361, Percent_Identity=35.1800554016621, Blast_Score=199, Evalue=3e-51,
Organism=Drosophila melanogaster, GI24584994, Length=376, Percent_Identity=32.7127659574468, Blast_Score=199, Evalue=4e-51,
Organism=Drosophila melanogaster, GI17985987, Length=374, Percent_Identity=37.7005347593583, Blast_Score=199, Evalue=5e-51,
Organism=Drosophila melanogaster, GI24582080, Length=348, Percent_Identity=32.4712643678161, Blast_Score=187, Evalue=1e-47,
Organism=Drosophila melanogaster, GI24582078, Length=348, Percent_Identity=32.4712643678161, Blast_Score=187, Evalue=1e-47,
Organism=Drosophila melanogaster, GI17136248, Length=348, Percent_Identity=32.4712643678161, Blast_Score=187, Evalue=1e-47,
Organism=Drosophila melanogaster, GI24582075, Length=348, Percent_Identity=32.4712643678161, Blast_Score=187, Evalue=1e-47,
Organism=Drosophila melanogaster, GI24581954, Length=350, Percent_Identity=31.1428571428571, Blast_Score=186, Evalue=3e-47,
Organism=Drosophila melanogaster, GI24581952, Length=350, Percent_Identity=31.1428571428571, Blast_Score=186, Evalue=3e-47,
Organism=Drosophila melanogaster, GI24581956, Length=350, Percent_Identity=31.1428571428571, Blast_Score=186, Evalue=3e-47,
Organism=Drosophila melanogaster, GI281365720, Length=312, Percent_Identity=37.1794871794872, Blast_Score=171, Evalue=8e-43,
Organism=Drosophila melanogaster, GI21355559, Length=389, Percent_Identity=33.6760925449871, Blast_Score=166, Evalue=4e-41,
Organism=Drosophila melanogaster, GI17647335, Length=367, Percent_Identity=29.4277929155313, Blast_Score=161, Evalue=1e-39,
Organism=Drosophila melanogaster, GI18859659, Length=480, Percent_Identity=28.75, Blast_Score=146, Evalue=3e-35,
Organism=Drosophila melanogaster, GI28571338, Length=445, Percent_Identity=28.9887640449438, Blast_Score=146, Evalue=3e-35,
Organism=Drosophila melanogaster, GI24642822, Length=387, Percent_Identity=28.6821705426357, Blast_Score=146, Evalue=3e-35,
Organism=Drosophila melanogaster, GI24643725, Length=375, Percent_Identity=27.7333333333333, Blast_Score=144, Evalue=2e-34,
Organism=Drosophila melanogaster, GI24666101, Length=364, Percent_Identity=31.8681318681319, Blast_Score=142, Evalue=6e-34,
Organism=Drosophila melanogaster, GI24668515, Length=331, Percent_Identity=29.9093655589124, Blast_Score=132, Evalue=3e-31,
Organism=Drosophila melanogaster, GI20130173, Length=341, Percent_Identity=28.7390029325513, Blast_Score=124, Evalue=1e-28,
Organism=Drosophila melanogaster, GI19920478, Length=352, Percent_Identity=28.9772727272727, Blast_Score=121, Evalue=1e-27,
Organism=Drosophila melanogaster, GI24640164, Length=350, Percent_Identity=24.5714285714286, Blast_Score=81, Evalue=1e-15,
Organism=Drosophila melanogaster, GI17136666, Length=227, Percent_Identity=28.6343612334802, Blast_Score=72, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005580
- InterPro:   IPR014001
- InterPro:   IPR011545
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR000629
- InterPro:   IPR014014 [H]

Pfam domain/function: PF03880 DbpA; PF00270 DEAD; PF00271 Helicase_C [H]

EC number: =3.6.4.13 [H]

Molecular weight: Translated: 49599; Mature: 49468

Theoretical pI: Translated: 7.32; Mature: 7.32

Prosite motif: PS00039 DEAD_ATP_HELICASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAFSTLNVLPAAQLNNLTELGYLEMTPVQAAALPVILAGNDVRVQARTGSGKTAAFGLG
CCCCCCCCCCCCHHHCCCHHCCEEEECCCHHHHEEEEEECCEEEEEEECCCCCCHHHHHH
LLHRIDVTLFQTQALVLCPTRELADQVAGELRRLARFLPNTKILTLCGGQPFGAQRDSLQ
HHHHHEEEEEECCEEEEECCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHC
HAPHIIVATPGRLLDHLQKETVSLDALHILVMDEADRMLDMGFSDAIDEVIRFAPETRQT
CCCEEEEECCHHHHHHHHHHHCCEEEEEEEEECCCHHHHHCCHHHHHHHHHHCCCCCCCE
LLFSATWPDAIAAISGRVQQQPIRIEIDTVDALPAIEQQFFETSAHEKISLLQTLLSQHQ
EEEECCCCHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
PASCVVFCNTKKDCQAVCDALNAVGQSALALHGDLEQRDRDQTLVRFANGSARILVATDV
CCEEEEEECCCHHHHHHHHHHHHHCCCCEEECCCHHHCCCCCCEEEEECCCEEEEEEECH
AARGLDIKSLELVVNYELAWDPEVHVHRIGRTARAGSSGLAISFCAPEEAQRANILSEML
HHCCCCEEEEEEEEEEEEECCCCHHHEECCCHHCCCCCCCEEEEECCCHHHHHHHHHHHH
QLKLNWLNAPARQSLLPLAAEMATLCIDGGKKAKMRPGDILGALTGDIGLDGADIGKINV
HHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEC
HPMHVYVAVRQAVAQKAWKQLQNGKIKGKSCRVRLLK
CEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECC
>Mature Secondary Structure 
TAFSTLNVLPAAQLNNLTELGYLEMTPVQAAALPVILAGNDVRVQARTGSGKTAAFGLG
CCCCCCCCCCCHHHCCCHHCCEEEECCCHHHHEEEEEECCEEEEEEECCCCCCHHHHHH
LLHRIDVTLFQTQALVLCPTRELADQVAGELRRLARFLPNTKILTLCGGQPFGAQRDSLQ
HHHHHEEEEEECCEEEEECCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHC
HAPHIIVATPGRLLDHLQKETVSLDALHILVMDEADRMLDMGFSDAIDEVIRFAPETRQT
CCCEEEEECCHHHHHHHHHHHCCEEEEEEEEECCCHHHHHCCHHHHHHHHHHCCCCCCCE
LLFSATWPDAIAAISGRVQQQPIRIEIDTVDALPAIEQQFFETSAHEKISLLQTLLSQHQ
EEEECCCCHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
PASCVVFCNTKKDCQAVCDALNAVGQSALALHGDLEQRDRDQTLVRFANGSARILVATDV
CCEEEEEECCCHHHHHHHHHHHHHCCCCEEECCCHHHCCCCCCEEEEECCCEEEEEEECH
AARGLDIKSLELVVNYELAWDPEVHVHRIGRTARAGSSGLAISFCAPEEAQRANILSEML
HHCCCCEEEEEEEEEEEEECCCCHHHEECCCHHCCCCCCCEEEEECCCHHHHHHHHHHHH
QLKLNWLNAPARQSLLPLAAEMATLCIDGGKKAKMRPGDILGALTGDIGLDGADIGKINV
HHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEC
HPMHVYVAVRQAVAQKAWKQLQNGKIKGKSCRVRLLK
CEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2216714; 8253085; 9097039; 9278503; 9016593; 11350034 [H]