| Definition | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 chromosome, complete genome. |
|---|---|
| Accession | NC_011094 |
| Length | 4,709,075 |
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The map label for this gene is ecoRIIM [H]
Identifier: 194736513
GI number: 194736513
Start: 4613401
End: 4614825
Strand: Direct
Name: ecoRIIM [H]
Synonym: SeSA_A4747
Alternate gene names: 194736513
Gene position: 4613401-4614825 (Clockwise)
Preceding gene: 194737135
Following gene: 194734574
Centisome position: 97.97
GC content: 44.98
Gene sequence:
>1425_bases ATGTCTGAATTCGATTTATTTGCGCAGGAACTGCTAGAAAAAGCAGAAGCAGAAGAAAAACAACAACAAGAGCGCGACAG GAAGCTGATTGATCGGGTGCTTGAAATTTACGACCAGAAGTATGTCGCAGAACTACTAAGAAAAATAGGTAAAAATGAGT GGAGCCGCGAAACACTTAACCGTTGGGTAAATGGCAAGTGTGAGCCAAAATCGCTCACCATGGCTGAAGAAGCGCTGTTA CGGAAAATGCTGCCGGAGCAACCCGCTCATCATCCTGACTATGATTTCCGCTTTATTGACCTGTTTGCCGGTATTGGTGG TATCCGTAAAGGATTCGAGGCCATCGGCGGGCAATGCGTTTTTACCAGTGAATGGAATAAAGAAGCGGTACGTACCTACA AAGCAAACTGGTACAACGATGAAGATGCGCACACATTCAATCTGGATATCCGCGAAGTCACGCTAAGCGGAGAAGAAGGC ATCTCAGAAGAGAAAGCCTACGCTCATATCGATCAACATATCCCGGATCATGACGTCCTGCTGGCCGGTTTTCCCTGCCA GCCATTCAGTCTGGCTGGGGTAAGTAAGAAAAACTCGCTCGGACGCGCACATGGATTCGAATGTGAAGCGCAGGGCACTC TGTTTTTCGATGTCGCCCGCATAATCAAGGCAAAGCAACCAGCCATTTTTGTGCTGGAAAACGTGAAAAACCTTAAGAGC CATGACAAAGGCAAAACGTTTAAAGTCATTATGGATACCCTTGATGAATTAGGCTATGAAGTCGCTGATGCCAATATCAC AGGGAAAGATGATCCTAAAATTATTGATGGTAAAAATTTCCTGCCACAACATCGTGAGCGTATTGTTCTGGTCGGATTCC GCCGTGACCTTAATATCCATCAGGGATTCACATTAAAGAATATTGATAAATTCTACCCTGAGAAAAGACCAACATTTGGT CAGCTTCTGGACTCTGTGGTTGACAGTAAATATATACTGAGCCCTAAGTTATGGGAATATCTCTATAACTATGCTAAAAA GCATGCTGCCAAAGGTAATGGATTCGGTTTTGGTCTGGTTGATCCGAATAATGAAAATAGCGTCGCGAGAACATTATCCG CTCGTTACCATAAAGATGGCTCTGAAATTCTCATCGACAGAGGATGGGATAAAGAACTCGGCGAAATCGATTTCTCTAAT CCAGAGAATCAGGAACAAAGGCCAAGAAGACTGACGCCCCATGAATGCGCAAGATTAATGGGATTTGAACAACCCGGAGG CAAGCCATTCCGAATCCCCGTTTCCGATACTCAGGCCTATCGCCAGTTTGGGAACTCAGTGGTCGTTCCCGTTTTTGAAG CCGTGGCAAAACTGCTTCAGCCTTATATTATGAAAGCCGCTGCTAGTAAGGTGACCAAAAAATAA
Upstream 100 bases:
>100_bases GCTCTGTTGAACGCATATACTGATCAAATATCCAGAACAAATCATTTCATCTGGGTCAAATGAGTGATATATTTTCACCC ATAAACCCCGAGGAGGCATT
Downstream 100 bases:
>100_bases TATAAACAGATCCCCCCGGAATTTATCCGGGGGGAAACAGAATCAAATTATTTCATCGGCATACAATGATTTAGTTTCAT CAATAAATGTTTCTAACGAA
Product: DNA cytosine methylase
Products: NA
Alternate protein names: M.EcoRII; Cytosine-specific methyltransferase EcoRII [H]
Number of amino acids: Translated: 474; Mature: 473
Protein sequence:
>474_residues MSEFDLFAQELLEKAEAEEKQQQERDRKLIDRVLEIYDQKYVAELLRKIGKNEWSRETLNRWVNGKCEPKSLTMAEEALL RKMLPEQPAHHPDYDFRFIDLFAGIGGIRKGFEAIGGQCVFTSEWNKEAVRTYKANWYNDEDAHTFNLDIREVTLSGEEG ISEEKAYAHIDQHIPDHDVLLAGFPCQPFSLAGVSKKNSLGRAHGFECEAQGTLFFDVARIIKAKQPAIFVLENVKNLKS HDKGKTFKVIMDTLDELGYEVADANITGKDDPKIIDGKNFLPQHRERIVLVGFRRDLNIHQGFTLKNIDKFYPEKRPTFG QLLDSVVDSKYILSPKLWEYLYNYAKKHAAKGNGFGFGLVDPNNENSVARTLSARYHKDGSEILIDRGWDKELGEIDFSN PENQEQRPRRLTPHECARLMGFEQPGGKPFRIPVSDTQAYRQFGNSVVVPVFEAVAKLLQPYIMKAAASKVTKK
Sequences:
>Translated_474_residues MSEFDLFAQELLEKAEAEEKQQQERDRKLIDRVLEIYDQKYVAELLRKIGKNEWSRETLNRWVNGKCEPKSLTMAEEALL RKMLPEQPAHHPDYDFRFIDLFAGIGGIRKGFEAIGGQCVFTSEWNKEAVRTYKANWYNDEDAHTFNLDIREVTLSGEEG ISEEKAYAHIDQHIPDHDVLLAGFPCQPFSLAGVSKKNSLGRAHGFECEAQGTLFFDVARIIKAKQPAIFVLENVKNLKS HDKGKTFKVIMDTLDELGYEVADANITGKDDPKIIDGKNFLPQHRERIVLVGFRRDLNIHQGFTLKNIDKFYPEKRPTFG QLLDSVVDSKYILSPKLWEYLYNYAKKHAAKGNGFGFGLVDPNNENSVARTLSARYHKDGSEILIDRGWDKELGEIDFSN PENQEQRPRRLTPHECARLMGFEQPGGKPFRIPVSDTQAYRQFGNSVVVPVFEAVAKLLQPYIMKAAASKVTKK >Mature_473_residues SEFDLFAQELLEKAEAEEKQQQERDRKLIDRVLEIYDQKYVAELLRKIGKNEWSRETLNRWVNGKCEPKSLTMAEEALLR KMLPEQPAHHPDYDFRFIDLFAGIGGIRKGFEAIGGQCVFTSEWNKEAVRTYKANWYNDEDAHTFNLDIREVTLSGEEGI SEEKAYAHIDQHIPDHDVLLAGFPCQPFSLAGVSKKNSLGRAHGFECEAQGTLFFDVARIIKAKQPAIFVLENVKNLKSH DKGKTFKVIMDTLDELGYEVADANITGKDDPKIIDGKNFLPQHRERIVLVGFRRDLNIHQGFTLKNIDKFYPEKRPTFGQ LLDSVVDSKYILSPKLWEYLYNYAKKHAAKGNGFGFGLVDPNNENSVARTLSARYHKDGSEILIDRGWDKELGEIDFSNP ENQEQRPRRLTPHECARLMGFEQPGGKPFRIPVSDTQAYRQFGNSVVVPVFEAVAKLLQPYIMKAAASKVTKK
Specific function: This methylase recognizes the double-stranded sequence CCWGG, causes specific methylation on C-2 on both strands, and protects the DNA from cleavage by the EcoRII endonuclease [H]
COG id: COG0270
COG function: function code L; Site-specific DNA methylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the C5-methyltransferase family [H]
Homologues:
Organism=Escherichia coli, GI1788271, Length=440, Percent_Identity=69.3181818181818, Blast_Score=624, Evalue=1e-180,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018117 - InterPro: IPR001525 [H]
Pfam domain/function: PF00145 DNA_methylase [H]
EC number: =2.1.1.37 [H]
Molecular weight: Translated: 54188; Mature: 54057
Theoretical pI: Translated: 6.85; Mature: 6.85
Prosite motif: PS00094 C5_MTASE_1 ; PS00095 C5_MTASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEFDLFAQELLEKAEAEEKQQQERDRKLIDRVLEIYDQKYVAELLRKIGKNEWSRETLN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH RWVNGKCEPKSLTMAEEALLRKMLPEQPAHHPDYDFRFIDLFAGIGGIRKGFEAIGGQCV HHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEE FTSEWNKEAVRTYKANWYNDEDAHTFNLDIREVTLSGEEGISEEKAYAHIDQHIPDHDVL EECCCCHHHHHHHHCCCCCCCCCEEEEEEEEEEEECCCCCCCHHHHHHHHHHCCCCCCEE LAGFPCQPFSLAGVSKKNSLGRAHGFECEAQGTLFFDVARIIKAKQPAIFVLENVKNLKS EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEHHHHHHHHH HDKGKTFKVIMDTLDELGYEVADANITGKDDPKIIDGKNFLPQHRERIVLVGFRRDLNIH CCCCCHHHHHHHHHHHCCCEEECCCCCCCCCCCEECCCCCCCCCCCEEEEEEEECCCCCC QGFTLKNIDKFYPEKRPTFGQLLDSVVDSKYILSPKLWEYLYNYAKKHAAKGNGFGFGLV CCCCHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECC DPNNENSVARTLSARYHKDGSEILIDRGWDKELGEIDFSNPENQEQRPRRLTPHECARLM CCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCHHCCCCCCCHHHHHHHH GFEQPGGKPFRIPVSDTQAYRQFGNSVVVPVFEAVAKLLQPYIMKAAASKVTKK CCCCCCCCEEEEECCHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SEFDLFAQELLEKAEAEEKQQQERDRKLIDRVLEIYDQKYVAELLRKIGKNEWSRETLN CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH RWVNGKCEPKSLTMAEEALLRKMLPEQPAHHPDYDFRFIDLFAGIGGIRKGFEAIGGQCV HHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEE FTSEWNKEAVRTYKANWYNDEDAHTFNLDIREVTLSGEEGISEEKAYAHIDQHIPDHDVL EECCCCHHHHHHHHCCCCCCCCCEEEEEEEEEEEECCCCCCCHHHHHHHHHHCCCCCCEE LAGFPCQPFSLAGVSKKNSLGRAHGFECEAQGTLFFDVARIIKAKQPAIFVLENVKNLKS EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEHHHHHHHHH HDKGKTFKVIMDTLDELGYEVADANITGKDDPKIIDGKNFLPQHRERIVLVGFRRDLNIH CCCCCHHHHHHHHHHHCCCEEECCCCCCCCCCCEECCCCCCCCCCCEEEEEEEECCCCCC QGFTLKNIDKFYPEKRPTFGQLLDSVVDSKYILSPKLWEYLYNYAKKHAAKGNGFGFGLV CCCCHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECC DPNNENSVARTLSARYHKDGSEILIDRGWDKELGEIDFSNPENQEQRPRRLTPHECARLM CCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCHHCCCCCCCHHHHHHHH GFEQPGGKPFRIPVSDTQAYRQFGNSVVVPVFEAVAKLLQPYIMKAAASKVTKK CCCCCCCCEEEEECCHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3029675 [H]