| Definition | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 chromosome, complete genome. |
|---|---|
| Accession | NC_011094 |
| Length | 4,709,075 |
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The map label for this gene is yeeZ [H]
Identifier: 194736501
GI number: 194736501
Start: 2167709
End: 2168533
Strand: Reverse
Name: yeeZ [H]
Synonym: SeSA_A2297
Alternate gene names: 194736501
Gene position: 2168533-2167709 (Counterclockwise)
Preceding gene: 194735784
Following gene: 194737070
Centisome position: 46.05
GC content: 56.85
Gene sequence:
>825_bases ATGAAAAAGGTCGCAATTGTCGGTTTAGGTTGGTTAGGCATGCCGCTGGCAATGTCGCTGGCAGCGAGAGGCTGGCAGGT TACCGGCAGCAAAACCACCCTTGACGGGGTGGAAGCGGCCCGTATGAGTGGAATTGAAAGCTATCCGCTGCGTCTGGAGC CGGAGCTGGTCTGTGAGGCGGACGATCTTGACGCTCTGCTGGATGTCGATGCGCTGGTGATAACACTGCCCGCGCGCCGT AGCGGTCCGGGAGAGGATTTTTATCTGCAGGCGATGCAGGAACTGGTCGACAGCGCGCTGGCTTATCGTATCCCGCGTAT TATTTTTACCAGTTCGACGTCTGTTTACGGCGATGCGCAAGGCGTGGTGAAAGAGAATACGCCGCGTAATCCGGTCACGG CCAGCGGGCGTACCCTGAAGGAACTGGAAGATTGGCTGCATAATCTGCCGGGCACGTCAGTGGATATTCTGCGGCTGGCG GGGTTGGTCGGGCCTGGACGCCACCCCGGACGTTTCTTTGCTGGAAAAACCGCGCCGGATGGTCAACACGGGGTCAATCT GGTGCATCTTGAAGACGTGGTTGGCGCAATTACCCTCTTGCTACAGGCGCCAAAAGGAGGGCACATCTATAATATATGTG CGCCGGCGCATCCAGCCCGCAACGTGTTTTATCCGCAAATGACGCGTTTGCTGGGAATGGCGCCGCCGCATTTTCGTGAC GCACCGGACAACGGCAAAGGGAAGATTATCGACGGTAGCCGGATTTGTAATGAGCTGGGATTTGAATATCAATATCCCGA TCCGCTGGTGATGCCGATGGAGTGA
Upstream 100 bases:
>100_bases AAGCAAGCGCTTTTTTCATTTCGCATTTATAGTATGAATTGTCAGTCACGGCGGGCTGGCGTAGCCTTATGTATAAGGCG TTAAAGTCAGGAGAAAATGG
Downstream 100 bases:
>100_bases GTCGCTGTCCAGCAGGTGGTCGCCATATAGCGCAAGGGGACGAGTATGAAACCACTGCTGGACGTTCTGGTTATTCTTGA TGCGTTAGAAAAAGAAGGCA
Product: protein YeeZ
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 274; Mature: 274
Protein sequence:
>274_residues MKKVAIVGLGWLGMPLAMSLAARGWQVTGSKTTLDGVEAARMSGIESYPLRLEPELVCEADDLDALLDVDALVITLPARR SGPGEDFYLQAMQELVDSALAYRIPRIIFTSSTSVYGDAQGVVKENTPRNPVTASGRTLKELEDWLHNLPGTSVDILRLA GLVGPGRHPGRFFAGKTAPDGQHGVNLVHLEDVVGAITLLLQAPKGGHIYNICAPAHPARNVFYPQMTRLLGMAPPHFRD APDNGKGKIIDGSRICNELGFEYQYPDPLVMPME
Sequences:
>Translated_274_residues MKKVAIVGLGWLGMPLAMSLAARGWQVTGSKTTLDGVEAARMSGIESYPLRLEPELVCEADDLDALLDVDALVITLPARR SGPGEDFYLQAMQELVDSALAYRIPRIIFTSSTSVYGDAQGVVKENTPRNPVTASGRTLKELEDWLHNLPGTSVDILRLA GLVGPGRHPGRFFAGKTAPDGQHGVNLVHLEDVVGAITLLLQAPKGGHIYNICAPAHPARNVFYPQMTRLLGMAPPHFRD APDNGKGKIIDGSRICNELGFEYQYPDPLVMPME >Mature_274_residues MKKVAIVGLGWLGMPLAMSLAARGWQVTGSKTTLDGVEAARMSGIESYPLRLEPELVCEADDLDALLDVDALVITLPARR SGPGEDFYLQAMQELVDSALAYRIPRIIFTSSTSVYGDAQGVVKENTPRNPVTASGRTLKELEDWLHNLPGTSVDILRLA GLVGPGRHPGRFFAGKTAPDGQHGVNLVHLEDVVGAITLLLQAPKGGHIYNICAPAHPARNVFYPQMTRLLGMAPPHFRD APDNGKGKIIDGSRICNELGFEYQYPDPLVMPME
Specific function: Unknown
COG id: COG0451
COG function: function code MG; Nucleoside-diphosphate-sugar epimerases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788327, Length=274, Percent_Identity=89.4160583941606, Blast_Score=488, Evalue=1e-139,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001509 - InterPro: IPR016040 [H]
Pfam domain/function: PF01370 Epimerase [H]
EC number: NA
Molecular weight: Translated: 29663; Mature: 29663
Theoretical pI: Translated: 5.89; Mature: 5.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKVAIVGLGWLGMPLAMSLAARGWQVTGSKTTLDGVEAARMSGIESYPLRLEPELVCEA CCEEEEEECCHHHHHHHHHHHHCCEEECCCCCCHHHHHHHHHCCCCCCCEEECCCEEECC DDLDALLDVDALVITLPARRSGPGEDFYLQAMQELVDSALAYRIPRIIFTSSTSVYGDAQ CCCHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCC GVVKENTPRNPVTASGRTLKELEDWLHNLPGTSVDILRLAGLVGPGRHPGRFFAGKTAPD CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCEECCCCCCC GQHGVNLVHLEDVVGAITLLLQAPKGGHIYNICAPAHPARNVFYPQMTRLLGMAPPHFRD CCCCEEEEEHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCC APDNGKGKIIDGSRICNELGFEYQYPDPLVMPME CCCCCCEEEECHHHHHHHHCCCEECCCCEEECCC >Mature Secondary Structure MKKVAIVGLGWLGMPLAMSLAARGWQVTGSKTTLDGVEAARMSGIESYPLRLEPELVCEA CCEEEEEECCHHHHHHHHHHHHCCEEECCCCCCHHHHHHHHHCCCCCCCEEECCCEEECC DDLDALLDVDALVITLPARRSGPGEDFYLQAMQELVDSALAYRIPRIIFTSSTSVYGDAQ CCCHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCC GVVKENTPRNPVTASGRTLKELEDWLHNLPGTSVDILRLAGLVGPGRHPGRFFAGKTAPD CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCEECCCCCCC GQHGVNLVHLEDVVGAITLLLQAPKGGHIYNICAPAHPARNVFYPQMTRLLGMAPPHFRD CCCCEEEEEHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCC APDNGKGKIIDGSRICNELGFEYQYPDPLVMPME CCCCCCEEEECHHHHHHHHCCCEECCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]