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The map label for this gene is hoxQ [H]

Identifier: 194736482

GI number: 194736482

Start: 1576362

End: 1577423

Strand: Reverse

Name: hoxQ [H]

Synonym: SeSA_A1637

Alternate gene names: 194736482

Gene position: 1577423-1576362 (Counterclockwise)

Preceding gene: 194735667

Following gene: 194737097

Centisome position: 33.5

GC content: 49.91

Gene sequence:

>1062_bases
GTGAATCATTCCAGAACTATTCCAGTCGTTAATATTGCCGGACCAGGCTCGCAGCCAGAAGAGGAAGACTTTAACTTTCT
TCCTATCCCCGCCGGCATTAATCTACCACTGACGCCGGTTTTACCGGAACAGGCGTTGCCCGCTGAGCTTCGTGTTGCCA
GACACATCCTGACTACGCTTATTCGCGATATGGATAACCCGGTGGCAACGCTCCCATTTCCCCTGAGCTATAAGCTGAAT
GCCACTGAGCAACAGAATAGCGGTTTGTTGGATCAACTGCTCGGCGAAGGTGAAATCTCCGCCCGGGTACTATTATCCGA
TGGAAAAGAACAGCGTATTCAGGAGACGGTTTTTACGGGTGTCTGGCGTGTGCGTGAATATAACGCTGACCAGCAACGGG
TTGCCGATGAAATTATCATTGGCCCGATCCCGGAGAGCATCTGGCAGACGCATCCGCAGCCGACGATTACGCCAGAATTG
CCGCCACAACCGGCGGGACTGATGAATGGCGCCTTTATCGCGCATGAAATAGCCGAGCGCGTAAAACAGCCGGTAAAAGA
GCCGCATATCATTAACTTAACGCTGTTGCCAGTAAACGATGCCGATCGCGAGTATCTGGATCATTTTTTAGGCGAAGGTT
GTAGCGCTATTTTTTCACGCGGATATGGTAAATGCCGGATTGTAAGTACGCATTTTCCCGGCGTATGGCGGGTAAATTAT
TTCAATGATATGAATACATTACTGCAAGATATGATTGAGATAGCGGACATTCCTGATATCGCCGTTGCAGGCATCGACGA
TATCGAAGATGCCTACGCGGGGCTAAAAAATACGTTGGAATGGTTGAAAGAATACCCGGTCACAGAAAATGAGCCAGTGG
TGCGCATGGAGTGCAAAGTATGTTGGTGGGTTTACGACCCTGCGCTGGGCGATGACGTATGGCAAATTCCACCCGGCGTG
CCCTTCAGCCAGTTACCTGATTACTGGTGCTGTCCGGTTTGCGAAACCAGTAAGTCCGGGTTTATGGTGATCGATGAAGG
TAATAATTCGTGCAAAGATTGA

Upstream 100 bases:

>100_bases
GCTGGCAAGAATACTCTCAGCGGGTGGCCGCATTGCTGACCACACCGGGCTATCGTCAGGATATTCCCGTTATCACGCAA
TAGAATGAAAGGTAACACAC

Downstream 100 bases:

>100_bases
CCGTCTATTCTCACCCGCTACGGATTATCTGGCAGGAGGCGCCGATCGGTCGTTTGTTACAGGGCGCAACACCGGTATAC
GCAAAAACGCTTATTTCACG

Product: hydrogenase-1 operon protein HyaF2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 353; Mature: 353

Protein sequence:

>353_residues
MNHSRTIPVVNIAGPGSQPEEEDFNFLPIPAGINLPLTPVLPEQALPAELRVARHILTTLIRDMDNPVATLPFPLSYKLN
ATEQQNSGLLDQLLGEGEISARVLLSDGKEQRIQETVFTGVWRVREYNADQQRVADEIIIGPIPESIWQTHPQPTITPEL
PPQPAGLMNGAFIAHEIAERVKQPVKEPHIINLTLLPVNDADREYLDHFLGEGCSAIFSRGYGKCRIVSTHFPGVWRVNY
FNDMNTLLQDMIEIADIPDIAVAGIDDIEDAYAGLKNTLEWLKEYPVTENEPVVRMECKVCWWVYDPALGDDVWQIPPGV
PFSQLPDYWCCPVCETSKSGFMVIDEGNNSCKD

Sequences:

>Translated_353_residues
MNHSRTIPVVNIAGPGSQPEEEDFNFLPIPAGINLPLTPVLPEQALPAELRVARHILTTLIRDMDNPVATLPFPLSYKLN
ATEQQNSGLLDQLLGEGEISARVLLSDGKEQRIQETVFTGVWRVREYNADQQRVADEIIIGPIPESIWQTHPQPTITPEL
PPQPAGLMNGAFIAHEIAERVKQPVKEPHIINLTLLPVNDADREYLDHFLGEGCSAIFSRGYGKCRIVSTHFPGVWRVNY
FNDMNTLLQDMIEIADIPDIAVAGIDDIEDAYAGLKNTLEWLKEYPVTENEPVVRMECKVCWWVYDPALGDDVWQIPPGV
PFSQLPDYWCCPVCETSKSGFMVIDEGNNSCKD
>Mature_353_residues
MNHSRTIPVVNIAGPGSQPEEEDFNFLPIPAGINLPLTPVLPEQALPAELRVARHILTTLIRDMDNPVATLPFPLSYKLN
ATEQQNSGLLDQLLGEGEISARVLLSDGKEQRIQETVFTGVWRVREYNADQQRVADEIIIGPIPESIWQTHPQPTITPEL
PPQPAGLMNGAFIAHEIAERVKQPVKEPHIINLTLLPVNDADREYLDHFLGEGCSAIFSRGYGKCRIVSTHFPGVWRVNY
FNDMNTLLQDMIEIADIPDIAVAGIDDIEDAYAGLKNTLEWLKEYPVTENEPVVRMECKVCWWVYDPALGDDVWQIPPGV
PFSQLPDYWCCPVCETSKSGFMVIDEGNNSCKD

Specific function: Not Known. Could Enhance The Incorporation Of Nickel To The Hydrogenase. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hupH/hyaF family [H]

Homologues:

Organism=Escherichia coli, GI1787211, Length=276, Percent_Identity=31.5217391304348, Blast_Score=142, Evalue=5e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006894 [H]

Pfam domain/function: PF04809 HupH_C [H]

EC number: NA

Molecular weight: Translated: 39505; Mature: 39505

Theoretical pI: Translated: 4.24; Mature: 4.24

Prosite motif: PS50903 RUBREDOXIN_LIKE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNHSRTIPVVNIAGPGSQPEEEDFNFLPIPAGINLPLTPVLPEQALPAELRVARHILTTL
CCCCCCCEEEEECCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
IRDMDNPVATLPFPLSYKLNATEQQNSGLLDQLLGEGEISARVLLSDGKEQRIQETVFTG
HHHCCCCCEECCCCCEEEECCCCCCCCCHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHH
VWRVREYNADQQRVADEIIIGPIPESIWQTHPQPTITPELPPQPAGLMNGAFIAHEIAER
HHHHHHCCCHHHHHHHHHEECCCCHHHHHCCCCCCCCCCCCCCCCCHHCHHHHHHHHHHH
VKQPVKEPHIINLTLLPVNDADREYLDHFLGEGCSAIFSRGYGKCRIVSTHFPGVWRVNY
HHHHCCCCCEEEEEEEECCCCCHHHHHHHHCCHHHHHHHCCCCEEEEEEECCCCEEEEEE
FNDMNTLLQDMIEIADIPDIAVAGIDDIEDAYAGLKNTLEWLKEYPVTENEPVVRMECKV
HHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEE
CWWVYDPALGDDVWQIPPGVPFSQLPDYWCCPVCETSKSGFMVIDEGNNSCKD
EEEEECCCCCCCCEECCCCCCHHHCCCCEECCCCCCCCCCEEEEECCCCCCCC
>Mature Secondary Structure
MNHSRTIPVVNIAGPGSQPEEEDFNFLPIPAGINLPLTPVLPEQALPAELRVARHILTTL
CCCCCCCEEEEECCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
IRDMDNPVATLPFPLSYKLNATEQQNSGLLDQLLGEGEISARVLLSDGKEQRIQETVFTG
HHHCCCCCEECCCCCEEEECCCCCCCCCHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHH
VWRVREYNADQQRVADEIIIGPIPESIWQTHPQPTITPELPPQPAGLMNGAFIAHEIAER
HHHHHHCCCHHHHHHHHHEECCCCHHHHHCCCCCCCCCCCCCCCCCHHCHHHHHHHHHHH
VKQPVKEPHIINLTLLPVNDADREYLDHFLGEGCSAIFSRGYGKCRIVSTHFPGVWRVNY
HHHHCCCCCEEEEEEEECCCCCHHHHHHHHCCHHHHHHHCCCCEEEEEEECCCCEEEEEE
FNDMNTLLQDMIEIADIPDIAVAGIDDIEDAYAGLKNTLEWLKEYPVTENEPVVRMECKV
HHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEE
CWWVYDPALGDDVWQIPPGVPFSQLPDYWCCPVCETSKSGFMVIDEGNNSCKD
EEEEECCCCCCCCEECCCCCCHHHCCCCEECCCCCCCCCCEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1383192; 12948488 [H]