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The map label for this gene is yjjU [H]

Identifier: 194736460

GI number: 194736460

Start: 4673322

End: 4674395

Strand: Direct

Name: yjjU [H]

Synonym: SeSA_A4817

Alternate gene names: 194736460

Gene position: 4673322-4674395 (Clockwise)

Preceding gene: 194736467

Following gene: 194737126

Centisome position: 99.24

GC content: 57.54

Gene sequence:

>1074_bases
GTGGGCCAGCGAATACCAGTTACGCTCGGCAATATTGCGCCGTTATCATTAACACCGTTCCGGCCAGGCCGTATGGCGCT
GGTCTGCGAGGGTGGCGGGCAGCGGGGCATCTTTACCGCAGGCGTGCTGGATGAGTTTATGCGCGCGCAGTTTAATCCTT
TCCATCTCTACTTCGGCACATCAGCCGGTGCGCAAAATCTCTCGGCGTATCTCTGCAACCAGCCCGGCTACGGGCGTAAA
GTCATTATGCGCTATACCACCAGGCGCGAATTTTTTGATCCGCTGCGATTTGTACGCGGAGGAAACCTTATTGACCTCGA
CTGGCTGGTGGAATCCACCGCCGCCCGAATGCCGCTGCAGATGGATACCGCAGCGCGCCTGTTCGACAGCGGAAAATCCT
TTTATATGTGCGCCTGCCGGGGGGATGATTACACGCCGGGCTATTTTTCGCCGACAAAACAAAACTGGCTTGATATCATT
CGCGCCTCCAGCGCCATACCGGGTTTCTACCGTACCGGCGTTACGTTAGAGGGCATCAACTATCTGGACGGTGGCATTAG
CGACGCCATTCCGGTTCAGGAGGCGGCAAAGCGGGGGGCGAAAACCATTGTGGTGATCCGCACCGTACCCTCGCAAATGT
ATTACACGCCGCAGTGGTTTAAGCGTATGGAGCGCTGGCTGGGGGAGAGCAGTCTACAGCCGTTGGTCAACCTGGTGCAG
CATCATGAAACGTCCTACAGCGCGATCCAACAATTTATTGAAAAGCCGCCGGGTAAGCTGCGGATCATTGAAATTTATCC
GCCGAAACCGCTGCACAGCATGGCGCTGGGCAGCCGTATCCCGGCGCTGCGTGAGGATTACAAAACCGGGCAATTATGCG
GGCGTTATTTCCTTGCCACCGTTGGTAAATTGCTCGCCGCAACGCCGCCTCTCTTGCGCCATACGTCGCGGATTGCCGTG
CCGGAAACGGTGGTCGTGCCTCCGGCGCCGGTGGCCAATGATACGCATGTGGCGGAGGTCATTAGCGCGCCGCAGGCAAA
CGACACCACATTTACCGACGAGGATCTGGCGTGA

Upstream 100 bases:

>100_bases
CTATCAAGCCAGTCCAGCGGACTGGCTTTTACGGTTTTAGCCGTTAACGTTTTGCGTTACCTTGTCAGCCTGGAAAAAAA
TGAAAAACAGGAAGGCAGAG

Downstream 100 bases:

>100_bases
GCTGGCGCTTTATTGATACACACTGCCATTTTGATTTCCCGCCCTTTACGGGCGATGAGCGCGCCAGTATTCAGCGTGCC
TGTGAGGCGGGAGTTGAAAA

Product: patatin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 357; Mature: 356

Protein sequence:

>357_residues
MGQRIPVTLGNIAPLSLTPFRPGRMALVCEGGGQRGIFTAGVLDEFMRAQFNPFHLYFGTSAGAQNLSAYLCNQPGYGRK
VIMRYTTRREFFDPLRFVRGGNLIDLDWLVESTAARMPLQMDTAARLFDSGKSFYMCACRGDDYTPGYFSPTKQNWLDII
RASSAIPGFYRTGVTLEGINYLDGGISDAIPVQEAAKRGAKTIVVIRTVPSQMYYTPQWFKRMERWLGESSLQPLVNLVQ
HHETSYSAIQQFIEKPPGKLRIIEIYPPKPLHSMALGSRIPALREDYKTGQLCGRYFLATVGKLLAATPPLLRHTSRIAV
PETVVVPPAPVANDTHVAEVISAPQANDTTFTDEDLA

Sequences:

>Translated_357_residues
MGQRIPVTLGNIAPLSLTPFRPGRMALVCEGGGQRGIFTAGVLDEFMRAQFNPFHLYFGTSAGAQNLSAYLCNQPGYGRK
VIMRYTTRREFFDPLRFVRGGNLIDLDWLVESTAARMPLQMDTAARLFDSGKSFYMCACRGDDYTPGYFSPTKQNWLDII
RASSAIPGFYRTGVTLEGINYLDGGISDAIPVQEAAKRGAKTIVVIRTVPSQMYYTPQWFKRMERWLGESSLQPLVNLVQ
HHETSYSAIQQFIEKPPGKLRIIEIYPPKPLHSMALGSRIPALREDYKTGQLCGRYFLATVGKLLAATPPLLRHTSRIAV
PETVVVPPAPVANDTHVAEVISAPQANDTTFTDEDLA
>Mature_356_residues
GQRIPVTLGNIAPLSLTPFRPGRMALVCEGGGQRGIFTAGVLDEFMRAQFNPFHLYFGTSAGAQNLSAYLCNQPGYGRKV
IMRYTTRREFFDPLRFVRGGNLIDLDWLVESTAARMPLQMDTAARLFDSGKSFYMCACRGDDYTPGYFSPTKQNWLDIIR
ASSAIPGFYRTGVTLEGINYLDGGISDAIPVQEAAKRGAKTIVVIRTVPSQMYYTPQWFKRMERWLGESSLQPLVNLVQH
HETSYSAIQQFIEKPPGKLRIIEIYPPKPLHSMALGSRIPALREDYKTGQLCGRYFLATVGKLLAATPPLLRHTSRIAVP
ETVVVPPAPVANDTHVAEVISAPQANDTTFTDEDLA

Specific function: Probable lipid hydrolase [H]

COG id: COG4667

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 patatin domain [H]

Homologues:

Organism=Escherichia coli, GI1790837, Length=357, Percent_Identity=85.9943977591036, Blast_Score=652, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016035
- InterPro:   IPR002641 [H]

Pfam domain/function: PF01734 Patatin [H]

EC number: NA

Molecular weight: Translated: 39642; Mature: 39511

Theoretical pI: Translated: 9.04; Mature: 9.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGQRIPVTLGNIAPLSLTPFRPGRMALVCEGGGQRGIFTAGVLDEFMRAQFNPFHLYFGT
CCCCCCEEECCCCCCEECCCCCCCEEEEECCCCCCCEEEHHHHHHHHHCCCCCEEEEECC
SAGAQNLSAYLCNQPGYGRKVIMRYTTRREFFDPLRFVRGGNLIDLDWLVESTAARMPLQ
CCCCCCCHHEEECCCCCCCEEEEEHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHCCCCC
MDTAARLFDSGKSFYMCACRGDDYTPGYFSPTKQNWLDIIRASSAIPGFYRTGVTLEGIN
HHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHCCEEECCCH
YLDGGISDAIPVQEAAKRGAKTIVVIRTVPSQMYYTPQWFKRMERWLGESSLQPLVNLVQ
HHCCCCCCCCCHHHHHHCCCCEEEEEEECCCCCEECHHHHHHHHHHHCCCHHHHHHHHHH
HHETSYSAIQQFIEKPPGKLRIIEIYPPKPLHSMALGSRIPALREDYKTGQLCGRYFLAT
HCCCHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
VGKLLAATPPLLRHTSRIAVPETVVVPPAPVANDTHVAEVISAPQANDTTFTDEDLA
HHHHHHCCCHHHHCCCCCCCCCEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
GQRIPVTLGNIAPLSLTPFRPGRMALVCEGGGQRGIFTAGVLDEFMRAQFNPFHLYFGT
CCCCCEEECCCCCCEECCCCCCCEEEEECCCCCCCEEEHHHHHHHHHCCCCCEEEEECC
SAGAQNLSAYLCNQPGYGRKVIMRYTTRREFFDPLRFVRGGNLIDLDWLVESTAARMPLQ
CCCCCCCHHEEECCCCCCCEEEEEHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHCCCCC
MDTAARLFDSGKSFYMCACRGDDYTPGYFSPTKQNWLDIIRASSAIPGFYRTGVTLEGIN
HHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHCCEEECCCH
YLDGGISDAIPVQEAAKRGAKTIVVIRTVPSQMYYTPQWFKRMERWLGESSLQPLVNLVQ
HHCCCCCCCCCHHHHHHCCCCEEEEEEECCCCCEECHHHHHHHHHHHCCCHHHHHHHHHH
HHETSYSAIQQFIEKPPGKLRIIEIYPPKPLHSMALGSRIPALREDYKTGQLCGRYFLAT
HCCCHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
VGKLLAATPPLLRHTSRIAVPETVVVPPAPVANDTHVAEVISAPQANDTTFTDEDLA
HHHHHHCCCHHHHCCCCCCCCCEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]