| Definition | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 chromosome, complete genome. |
|---|---|
| Accession | NC_011094 |
| Length | 4,709,075 |
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The map label for this gene is yjjP [H]
Identifier: 194736446
GI number: 194736446
Start: 4661041
End: 4661985
Strand: Reverse
Name: yjjP [H]
Synonym: SeSA_A4800
Alternate gene names: 194736446
Gene position: 4661985-4661041 (Counterclockwise)
Preceding gene: 194735931
Following gene: 194737886
Centisome position: 99.0
GC content: 52.17
Gene sequence:
>945_bases GTGACGAAGCGCACGTCTCAGAAAGCTTATGCGTTGCGTCTGGCGGTTGACGTTTTTATCAACAAGAAATTGATCTTAAC CAACGCCATCATGCCTGCGCTTCGTGTTAAAAAGGAAGCCTCTGTCATAGTGGCGGCGCATAAAATGTCTTTTCGGACAG GACGAGTCATGCAAGAAGAGCAATCAATTCAACGAGCAGTAACACGGTTATGTATTCAATGCGGGCTGTTTTTATTGCAG CACGGGGCGGAAAGCGCACTGGTTGATGAGCTTTCCACCCGCCTCGGTTTGGCGCTCGGTATGGATAGCGTCGAAAGCGC GATCTCCTCTAACGCCATTGTCCTGACGACCATTAAAGACGGACAATGTCTGACATCGACACGTAAAAACCAGGATCGCG GCATTAATATGCACGTCGTCACGGAGGTTCAGCATATCGTTATCCTCGCGGAACATCGTCTGCTGGATTACAAAGGCGTG GAAAAACGTTTTAGCCAGCTCCGCCCGCTGCGTTATCCGCGCTGGCTGGTGGCGTTTATGGTCGGTCTTTCCTGCTCCTG CTTTTGTAAGCTGAATAATGGCGGCTGGGATGGCGCGGTTATCACCTTTTTCGCCAGTATGATAGCCATGTATATTCGCC AGATGCTGGCGCAGCGGCATTTACATCCGCAGATCAATTTTTGCATTACCGCCTTTGTCGCTACCACGATTTCCGGGCTG ATGCTCACCCTCCCCGCCTTTAGCCAGACGCCCACTATCGCCATGGCGGCGAGCGTACTGCTACTGGTGCCGGGCTTTCC GCTGATTAATTCCGTCGCAGATATGTTTAAAGGACATATTAATACCGGGCTGGCGCGCTGGGCTATCGCCAGCCTGTTGA CACTGGCCACCTGTGTGGGCGTAGTGATGTCAATGACAGTATGGGGGCTACGAGGATGGGTATAA
Upstream 100 bases:
>100_bases CACCACATCATTGATTCAAAAATGAACGGCCAGGCTGGCATAATGTCTCTATTCTGGAAACGGACATACGAGAACCGTCG CCCATAAGGATATCCTGCCT
Downstream 100 bases:
>100_bases TCGACTTTTTACTGGCGCTAATGCAGGACATGATCTTGTCTGCGATCCCCGCCGTCGGGTTTGCGATGGTCTTTAATGTT CCCCACCGGGCACTTCCGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 314; Mature: 313
Protein sequence:
>314_residues MTKRTSQKAYALRLAVDVFINKKLILTNAIMPALRVKKEASVIVAAHKMSFRTGRVMQEEQSIQRAVTRLCIQCGLFLLQ HGAESALVDELSTRLGLALGMDSVESAISSNAIVLTTIKDGQCLTSTRKNQDRGINMHVVTEVQHIVILAEHRLLDYKGV EKRFSQLRPLRYPRWLVAFMVGLSCSCFCKLNNGGWDGAVITFFASMIAMYIRQMLAQRHLHPQINFCITAFVATTISGL MLTLPAFSQTPTIAMAASVLLLVPGFPLINSVADMFKGHINTGLARWAIASLLTLATCVGVVMSMTVWGLRGWV
Sequences:
>Translated_314_residues MTKRTSQKAYALRLAVDVFINKKLILTNAIMPALRVKKEASVIVAAHKMSFRTGRVMQEEQSIQRAVTRLCIQCGLFLLQ HGAESALVDELSTRLGLALGMDSVESAISSNAIVLTTIKDGQCLTSTRKNQDRGINMHVVTEVQHIVILAEHRLLDYKGV EKRFSQLRPLRYPRWLVAFMVGLSCSCFCKLNNGGWDGAVITFFASMIAMYIRQMLAQRHLHPQINFCITAFVATTISGL MLTLPAFSQTPTIAMAASVLLLVPGFPLINSVADMFKGHINTGLARWAIASLLTLATCVGVVMSMTVWGLRGWV >Mature_313_residues TKRTSQKAYALRLAVDVFINKKLILTNAIMPALRVKKEASVIVAAHKMSFRTGRVMQEEQSIQRAVTRLCIQCGLFLLQH GAESALVDELSTRLGLALGMDSVESAISSNAIVLTTIKDGQCLTSTRKNQDRGINMHVVTEVQHIVILAEHRLLDYKGVE KRFSQLRPLRYPRWLVAFMVGLSCSCFCKLNNGGWDGAVITFFASMIAMYIRQMLAQRHLHPQINFCITAFVATTISGLM LTLPAFSQTPTIAMAASVLLLVPGFPLINSVADMFKGHINTGLARWAIASLLTLATCVGVVMSMTVWGLRGWV
Specific function: Unknown
COG id: COG2966
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To H.influenzae HI_0108 [H]
Homologues:
Organism=Escherichia coli, GI87082435, Length=258, Percent_Identity=90.3100775193798, Blast_Score=489, Evalue=1e-139,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010619 [H]
Pfam domain/function: PF06738 DUF1212 [H]
EC number: NA
Molecular weight: Translated: 34641; Mature: 34509
Theoretical pI: Translated: 10.35; Mature: 10.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 7.3 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKRTSQKAYALRLAVDVFINKKLILTNAIMPALRVKKEASVIVAAHKMSFRTGRVMQEE CCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHH QSIQRAVTRLCIQCGLFLLQHGAESALVDELSTRLGLALGMDSVESAISSNAIVLTTIKD HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCHHHHHHHHCCCCEEEEEECC GQCLTSTRKNQDRGINMHVVTEVQHIVILAEHRLLDYKGVEKRFSQLRPLRYPRWLVAFM CCHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHHHHH VGLSCSCFCKLNNGGWDGAVITFFASMIAMYIRQMLAQRHLHPQINFCITAFVATTISGL HHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH MLTLPAFSQTPTIAMAASVLLLVPGFPLINSVADMFKGHINTGLARWAIASLLTLATCVG HHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVMSMTVWGLRGWV HHHHHHHHHHHCCC >Mature Secondary Structure TKRTSQKAYALRLAVDVFINKKLILTNAIMPALRVKKEASVIVAAHKMSFRTGRVMQEE CCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHH QSIQRAVTRLCIQCGLFLLQHGAESALVDELSTRLGLALGMDSVESAISSNAIVLTTIKD HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCHHHHHHHHCCCCEEEEEECC GQCLTSTRKNQDRGINMHVVTEVQHIVILAEHRLLDYKGVEKRFSQLRPLRYPRWLVAFM CCHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHHHHH VGLSCSCFCKLNNGGWDGAVITFFASMIAMYIRQMLAQRHLHPQINFCITAFVATTISGL HHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH MLTLPAFSQTPTIAMAASVLLLVPGFPLINSVADMFKGHINTGLARWAIASLLTLATCVG HHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVMSMTVWGLRGWV HHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503 [H]