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The map label for this gene is yfcD [H]

Identifier: 194736221

GI number: 194736221

Start: 2461507

End: 2462061

Strand: Reverse

Name: yfcD [H]

Synonym: SeSA_A2575

Alternate gene names: 194736221

Gene position: 2462061-2461507 (Counterclockwise)

Preceding gene: 194736823

Following gene: 194736612

Centisome position: 52.28

GC content: 54.77

Gene sequence:

>555_bases
ATGGTGGAACAGCGTCGTTTGGCAAGTACGGAATGGGTGGATATTGTGAATGAAGACAATGAAGTCATTGCACAGTCCAG
CCGGGAACAGATGCGTGCGCAACGCTTACGGCATCGTGCGACGTATATCGTCGTTCATGATGGTATGGGTAAAATTCTGG
TGCAGCGTCGTACCGAAACAAAAGATTTTTTGCCCGGTATGTTAGATGCTACCGCAGGCGGCGTGGTCCAGGCTGATGAG
CAGCTACTGGAATCTGCCCGCCGCGAAGCGGAAGAAGAGTTGGGTATTGCAGGCGTGCCGTTTGCCGAACACGGTCTGTT
TTACTTTGAAGACCCACATTGCCGGGTTTGGGGCGCTCTGTTTAGCTGCGTTTCCCACGGGCCTTTCGCGCTTCAGGAAG
ATGAAGTCAGCGAAGTGTGTTGGCTGACTCCGGAGGAGATCACCGCGCGCTGTGATGAGTTTACGCCGGACTCGCTCAAA
GCGCTGGCGCTGTGGATGACCCGCAACGCCAAAAACGAAGCCGCGCTCCAGGAGAAACCGGAAGAGACGGAATAA

Upstream 100 bases:

>100_bases
TCAATGATCAAAGTATCATTGCGCAGGTTGCAATTAACTCGTAATTTACCTCACAAACGTAAATGCGCCGTAAGAGCGCC
AGAAATAAGAAGGTTTCCTG

Downstream 100 bases:

>100_bases
GCGTTTTAGCAGCTTTCCCGCATACATAAACTGGAGGCGATGGATTTTCGATCGCTCCAGTTTCCCTGATTTAACCTTTC
CAACAGCGCCCGTCCGGCTT

Product: nudix hydrolase 3

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 184; Mature: 184

Protein sequence:

>184_residues
MVEQRRLASTEWVDIVNEDNEVIAQSSREQMRAQRLRHRATYIVVHDGMGKILVQRRTETKDFLPGMLDATAGGVVQADE
QLLESARREAEEELGIAGVPFAEHGLFYFEDPHCRVWGALFSCVSHGPFALQEDEVSEVCWLTPEEITARCDEFTPDSLK
ALALWMTRNAKNEAALQEKPEETE

Sequences:

>Translated_184_residues
MVEQRRLASTEWVDIVNEDNEVIAQSSREQMRAQRLRHRATYIVVHDGMGKILVQRRTETKDFLPGMLDATAGGVVQADE
QLLESARREAEEELGIAGVPFAEHGLFYFEDPHCRVWGALFSCVSHGPFALQEDEVSEVCWLTPEEITARCDEFTPDSLK
ALALWMTRNAKNEAALQEKPEETE
>Mature_184_residues
MVEQRRLASTEWVDIVNEDNEVIAQSSREQMRAQRLRHRATYIVVHDGMGKILVQRRTETKDFLPGMLDATAGGVVQADE
QLLESARREAEEELGIAGVPFAEHGLFYFEDPHCRVWGALFSCVSHGPFALQEDEVSEVCWLTPEEITARCDEFTPDSLK
ALALWMTRNAKNEAALQEKPEETE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

Organism=Escherichia coli, GI1788637, Length=180, Percent_Identity=92.7777777777778, Blast_Score=323, Evalue=6e-90,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000086
- InterPro:   IPR015797 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: 3.6.-.- [C]

Molecular weight: Translated: 20876; Mature: 20876

Theoretical pI: Translated: 4.39; Mature: 4.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVEQRRLASTEWVDIVNEDNEVIAQSSREQMRAQRLRHRATYIVVHDGMGKILVQRRTET
CCCCHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCHHHHHHCCCC
KDFLPGMLDATAGGVVQADEQLLESARREAEEELGIAGVPFAEHGLFYFEDPHCRVWGAL
HHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHCCEEEEECCCHHHHHHH
FSCVSHGPFALQEDEVSEVCWLTPEEITARCDEFTPDSLKALALWMTRNAKNEAALQEKP
HHHHCCCCCCCCCCCHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHCCC
EETE
CCCC
>Mature Secondary Structure
MVEQRRLASTEWVDIVNEDNEVIAQSSREQMRAQRLRHRATYIVVHDGMGKILVQRRTET
CCCCHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCHHHHHHCCCC
KDFLPGMLDATAGGVVQADEQLLESARREAEEELGIAGVPFAEHGLFYFEDPHCRVWGAL
HHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHCCEEEEECCCHHHHHHH
FSCVSHGPFALQEDEVSEVCWLTPEEITARCDEFTPDSLKALALWMTRNAKNEAALQEKP
HHHHCCCCCCCCCCCHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHCCC
EETE
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]