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The map label for this gene is ymfO [H]

Identifier: 194736014

GI number: 194736014

Start: 2142851

End: 2144092

Strand: Reverse

Name: ymfO [H]

Synonym: SeSA_A2265

Alternate gene names: 194736014

Gene position: 2144092-2142851 (Counterclockwise)

Preceding gene: 194738012

Following gene: 194736329

Centisome position: 45.53

GC content: 55.72

Gene sequence:

>1242_bases
GTGTTCTTTTCGGGATTATTTCAACGAAAAAGTGACGCGCCGGTGACCACGCCAGCAGAGTTGGCGGATGCTATCGGGCT
GTCATACGACACCTATACCGGAAAGCAGATCAGCAGTCAGCGGGCCATGCGACTGACGGCGGTTTTTTCCTGCGTCAGAG
TGCTGGCAGAGTCGGTCGGGATGTTGCCCTGCAGCCTGTATCACCTGAACGGCAGCCTGAAACAGAGAGCCACTGGCGAA
CGTCTGCATAAGCTGATCTCCACGCATCCCAATGGCTATATGACGCCGCAGGAGTTCTGGGAGCTGGTGGTCACCTGTTT
GTGCCTGCGGGGCAACTTTTATGCCTACAAAGTGAAAGCATTTGGCGAAGTGGCTGAATTGCTGCCCGTCGATCCCGGTT
GTGTGGTGCCGAAGCTTAACAGTAGCTGGAAGCCGGTCTATCAGGTCACATTCCCGGATGGCTCCACGGATGTACTGAGC
CAGGAGGATATCTGGCATGTGCGCACGCTGACGCTGGACGGACTGGTGGGGCTGAATCCCATCGCCTATGCCCGCGAGGC
AATATCGCTGGCGGCAGCGACCGAAGAGCACGGGGCCAGACTGTTCAGCAATGGCGCGGTGACGTCGGGTGTGTTGCGTA
CAGAGCAGACGCTGTCGGATCAGGCTTATGAGCGCCTGAAGAAAGATTTTGAGGAGCGTCACACCGGGCTTGGTAATGCT
CATCGCCCGATGATCCTTGAGATGGGGCTGGACTGGAAGTCGATGGCGCTGAACGCCGAGGACAGCCAGTTCCTGGAAAC
CCGCAAGTTTCAGCTTGAAGAAATCTGTCGTCTGTTCCGGGTGCCATTGCACATGGTGCAGAACACCGATCGCGCCACCT
TCAACAATATTGAAGAGCTGGGGCTGGGATTTATCAACTATTCACTGGTGCCGTATCTGACCCGCATCGAACAGCGGATC
AACACCGGACTGGTACGAAAAAGTAAGCAGGGCGTTTTTTACGCCAAATTTAACGCGGGGGCGTTACTGCGTGGGGATGT
GAAGTCCCGTTTTGAAGCCTATGCCACCGGGATCAACTGGGGGATTTACTCTCCCAATGACTGCCGCGACCTGGAAGATA
TGAATCCGCGTCCCGGTGGCGATGTCTATCTCACACCGATGAACATGACCACGAAACCCTCCGATGGCAGTAAAGCCGGT
AAGCAGAAGGATAACGCCAATGCAGACGAAACAACGTCTTGA

Upstream 100 bases:

>100_bases
CGGCGGGTTTTGTTGTTGCCGGGGCGCTGTGCATGTTCTGGTCGTGGCTGGTGGCGCGATATCTCGACCGTACACAGCAG
TCTGTCGGCGGAGGTAAATA

Downstream 100 bases:

>100_bases
TGTACCGCTGAGTCTTAAATCTGTCAGTGACTCCGGTGAGTTTGAAGGGTATGGCTCCGTCTTTGGTGTAAAGGACAGCC
ACGATGATGTGGTGATGTCC

Product: phage portal protein, HK97 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 413; Mature: 413

Protein sequence:

>413_residues
MFFSGLFQRKSDAPVTTPAELADAIGLSYDTYTGKQISSQRAMRLTAVFSCVRVLAESVGMLPCSLYHLNGSLKQRATGE
RLHKLISTHPNGYMTPQEFWELVVTCLCLRGNFYAYKVKAFGEVAELLPVDPGCVVPKLNSSWKPVYQVTFPDGSTDVLS
QEDIWHVRTLTLDGLVGLNPIAYAREAISLAAATEEHGARLFSNGAVTSGVLRTEQTLSDQAYERLKKDFEERHTGLGNA
HRPMILEMGLDWKSMALNAEDSQFLETRKFQLEEICRLFRVPLHMVQNTDRATFNNIEELGLGFINYSLVPYLTRIEQRI
NTGLVRKSKQGVFYAKFNAGALLRGDVKSRFEAYATGINWGIYSPNDCRDLEDMNPRPGGDVYLTPMNMTTKPSDGSKAG
KQKDNANADETTS

Sequences:

>Translated_413_residues
MFFSGLFQRKSDAPVTTPAELADAIGLSYDTYTGKQISSQRAMRLTAVFSCVRVLAESVGMLPCSLYHLNGSLKQRATGE
RLHKLISTHPNGYMTPQEFWELVVTCLCLRGNFYAYKVKAFGEVAELLPVDPGCVVPKLNSSWKPVYQVTFPDGSTDVLS
QEDIWHVRTLTLDGLVGLNPIAYAREAISLAAATEEHGARLFSNGAVTSGVLRTEQTLSDQAYERLKKDFEERHTGLGNA
HRPMILEMGLDWKSMALNAEDSQFLETRKFQLEEICRLFRVPLHMVQNTDRATFNNIEELGLGFINYSLVPYLTRIEQRI
NTGLVRKSKQGVFYAKFNAGALLRGDVKSRFEAYATGINWGIYSPNDCRDLEDMNPRPGGDVYLTPMNMTTKPSDGSKAG
KQKDNANADETTS
>Mature_413_residues
MFFSGLFQRKSDAPVTTPAELADAIGLSYDTYTGKQISSQRAMRLTAVFSCVRVLAESVGMLPCSLYHLNGSLKQRATGE
RLHKLISTHPNGYMTPQEFWELVVTCLCLRGNFYAYKVKAFGEVAELLPVDPGCVVPKLNSSWKPVYQVTFPDGSTDVLS
QEDIWHVRTLTLDGLVGLNPIAYAREAISLAAATEEHGARLFSNGAVTSGVLRTEQTLSDQAYERLKKDFEERHTGLGNA
HRPMILEMGLDWKSMALNAEDSQFLETRKFQLEEICRLFRVPLHMVQNTDRATFNNIEELGLGFINYSLVPYLTRIEQRI
NTGLVRKSKQGVFYAKFNAGALLRGDVKSRFEAYATGINWGIYSPNDCRDLEDMNPRPGGDVYLTPMNMTTKPSDGSKAG
KQKDNANADETTS

Specific function: Unknown

COG id: COG4695

COG function: function code S; Phage-related protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phage portal family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006944 [H]

Pfam domain/function: PF04860 Phage_portal [H]

EC number: NA

Molecular weight: Translated: 46067; Mature: 46067

Theoretical pI: Translated: 6.93; Mature: 6.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFFSGLFQRKSDAPVTTPAELADAIGLSYDTYTGKQISSQRAMRLTAVFSCVRVLAESVG
CCCCHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
MLPCSLYHLNGSLKQRATGERLHKLISTHPNGYMTPQEFWELVVTCLCLRGNFYAYKVKA
CCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEHH
FGEVAELLPVDPGCVVPKLNSSWKPVYQVTFPDGSTDVLSQEDIWHVRTLTLDGLVGLNP
HHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEEEECCCCCCCH
IAYAREAISLAAATEEHGARLFSNGAVTSGVLRTEQTLSDQAYERLKKDFEERHTGLGNA
HHHHHHHHHHHHHHHHHCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
HRPMILEMGLDWKSMALNAEDSQFLETRKFQLEEICRLFRVPLHMVQNTDRATFNNIEEL
CCCEEEEECCCHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCHHHH
GLGFINYSLVPYLTRIEQRINTGLVRKSKQGVFYAKFNAGALLRGDVKSRFEAYATGINW
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEECHHHHHHHHHHCCCCC
GIYSPNDCRDLEDMNPRPGGDVYLTPMNMTTKPSDGSKAGKQKDNANADETTS
CCCCCCCCCCHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MFFSGLFQRKSDAPVTTPAELADAIGLSYDTYTGKQISSQRAMRLTAVFSCVRVLAESVG
CCCCHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
MLPCSLYHLNGSLKQRATGERLHKLISTHPNGYMTPQEFWELVVTCLCLRGNFYAYKVKA
CCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEHH
FGEVAELLPVDPGCVVPKLNSSWKPVYQVTFPDGSTDVLSQEDIWHVRTLTLDGLVGLNP
HHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEEEECCCCCCCH
IAYAREAISLAAATEEHGARLFSNGAVTSGVLRTEQTLSDQAYERLKKDFEERHTGLGNA
HHHHHHHHHHHHHHHHHCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
HRPMILEMGLDWKSMALNAEDSQFLETRKFQLEEICRLFRVPLHMVQNTDRATFNNIEEL
CCCEEEEECCCHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCHHHH
GLGFINYSLVPYLTRIEQRINTGLVRKSKQGVFYAKFNAGALLRGDVKSRFEAYATGINW
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEECHHHHHHHHHHCCCCC
GIYSPNDCRDLEDMNPRPGGDVYLTPMNMTTKPSDGSKAGKQKDNANADETTS
CCCCCCCCCCHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]