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The map label for this gene is ygaP [H]

Identifier: 194736003

GI number: 194736003

Start: 2853476

End: 2854003

Strand: Direct

Name: ygaP [H]

Synonym: SeSA_A2943

Alternate gene names: 194736003

Gene position: 2853476-2854003 (Clockwise)

Preceding gene: 194735773

Following gene: 194734196

Centisome position: 60.6

GC content: 56.63

Gene sequence:

>528_bases
ATGTCCATTGGGATAGTTTCCCCCCGTGAGGCGCAAGCGCTGATGGCGCAAGGCGCGAAACTGATTGATGTGCGCGACGC
CGATGAATATCTGCGCGAGCATATTCCACATGCGCAACTGGCGCCGCTCTCCCGGCTTGAACAGGGCGATTTGCCCGCCA
ACCTGCGAGCGGAACAGATTATTTTTCACTGTCAGTCAGGTAAACGAACCAGCAGCAATGCAGCAAAACTACAGGCCATT
GCCGCCCCTGCTCAGGTCAGTCTACTGGAAGGCGGTATCGACGGATGGAAAGCGGCAGGATTGCCCGTCACAGAAGACAA
ATCGCAACCGTTGCCACTGATGCGTCAGGTGCAAATCGCCGCCGGCGGGTTGACGTTGCTTGGGGTGATTCTGGGCTATA
CGGTCCACGGCGGCTTTTTCCTCATTAGCGGTTTTGTCGGGGCCGGGTTAATGCTGGCAGGCATGACCGGCTTCTGCGGA
ATGGCGCGACTACTGGAAAAAATGCCCTGGAATACCCGTACTCATTAA

Upstream 100 bases:

>100_bases
TCAACGCGATGCCCAGCGCATTCACTATTTCATTAAAAATAAGGCGGTTAATACGATTATCGCCACGTTAAAGAATCTCT
ATTGTCCATAAGGAGGCACG

Downstream 100 bases:

>100_bases
GCGGTACCTTCACCACGCGTCGGTAAGTGTGTAGTAGACTGAAGGCGGGTTTATAGCATTGTTCAACAGGAGGGCGTGAT
GTTCACACCAGGCGATTTTG

Product: inner membrane protein YgaP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 175; Mature: 174

Protein sequence:

>175_residues
MSIGIVSPREAQALMAQGAKLIDVRDADEYLREHIPHAQLAPLSRLEQGDLPANLRAEQIIFHCQSGKRTSSNAAKLQAI
AAPAQVSLLEGGIDGWKAAGLPVTEDKSQPLPLMRQVQIAAGGLTLLGVILGYTVHGGFFLISGFVGAGLMLAGMTGFCG
MARLLEKMPWNTRTH

Sequences:

>Translated_175_residues
MSIGIVSPREAQALMAQGAKLIDVRDADEYLREHIPHAQLAPLSRLEQGDLPANLRAEQIIFHCQSGKRTSSNAAKLQAI
AAPAQVSLLEGGIDGWKAAGLPVTEDKSQPLPLMRQVQIAAGGLTLLGVILGYTVHGGFFLISGFVGAGLMLAGMTGFCG
MARLLEKMPWNTRTH
>Mature_174_residues
SIGIVSPREAQALMAQGAKLIDVRDADEYLREHIPHAQLAPLSRLEQGDLPANLRAEQIIFHCQSGKRTSSNAAKLQAIA
APAQVSLLEGGIDGWKAAGLPVTEDKSQPLPLMRQVQIAAGGLTLLGVILGYTVHGGFFLISGFVGAGLMLAGMTGFCGM
ARLLEKMPWNTRTH

Specific function: Unknown

COG id: COG0607

COG function: function code P; Rhodanese-related sulfurtransferase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To Synechocystis PCC 6803 slr1261 [H]

Homologues:

Organism=Escherichia coli, GI1789022, Length=173, Percent_Identity=75.7225433526011, Blast_Score=276, Evalue=8e-76,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021309
- InterPro:   IPR001763 [H]

Pfam domain/function: PF11127 DUF2892; PF00581 Rhodanese [H]

EC number: NA

Molecular weight: Translated: 18624; Mature: 18493

Theoretical pI: Translated: 8.25; Mature: 8.25

Prosite motif: PS50206 RHODANESE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIGIVSPREAQALMAQGAKLIDVRDADEYLREHIPHAQLAPLSRLEQGDLPANLRAEQI
CCCCCCCCHHHHHHHHCCCEEEEECCHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCHHHH
IFHCQSGKRTSSNAAKLQAIAAPAQVSLLEGGIDGWKAAGLPVTEDKSQPLPLMRQVQIA
EEECCCCCCCCCHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
AGGLTLLGVILGYTVHGGFFLISGFVGAGLMLAGMTGFCGMARLLEKMPWNTRTH
HCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
SIGIVSPREAQALMAQGAKLIDVRDADEYLREHIPHAQLAPLSRLEQGDLPANLRAEQI
CCCCCCCHHHHHHHHCCCEEEEECCHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCHHHH
IFHCQSGKRTSSNAAKLQAIAAPAQVSLLEGGIDGWKAAGLPVTEDKSQPLPLMRQVQIA
EEECCCCCCCCCHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
AGGLTLLGVILGYTVHGGFFLISGFVGAGLMLAGMTGFCGMARLLEKMPWNTRTH
HCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503; 1480493 [H]