| Definition | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 chromosome, complete genome. |
|---|---|
| Accession | NC_011094 |
| Length | 4,709,075 |
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The map label for this gene is srlE [H]
Identifier: 194735999
GI number: 194735999
Start: 2886061
End: 2887032
Strand: Direct
Name: srlE [H]
Synonym: SeSA_A2984
Alternate gene names: 194735999
Gene position: 2886061-2887032 (Clockwise)
Preceding gene: 194735062
Following gene: 194734170
Centisome position: 61.29
GC content: 58.23
Gene sequence:
>972_bases ATGACACGGGTTCGTATTGAGAAAGGCGCCGGCGGCTGGGGCGGCCCGCTTGAACTGGACGTTACGCCAGGCAAAAAGAT CGTCTATATCACAGCCGGTACGCGCCCGGCGATCGTCGACAAACTGGCGCAACTAACAGGCTGGCAAGCGGTGGACGGCT TTAAAGAAGGCGAACCGCCGGAAGCGGAGATCGGCGCGGCCATTATCGACTGTGGCGGTACGCTGCGCTGCGGTATCTAT CCGAAACGCCGGATTCCAACCATTAATATTCACTCGACGGGTAAGTCCGGCCCACTGGCGCAGTATATTGTTGAGGATAT TTATGTCTCCGGCGTAAAAGAAGAAAACATTACTCTTGTCGGCGAAACGCCTGCCAGTCCCCAGCCTGCCAAAACGACAT TAGGACGTGACTACGACACCAGCAAAAAAATCACCGAGCAGAGCGACGGGCTGCTGGCAAAAGTTGGTATGGGAATGGGC TCCGCCGTGGCGGTACTGTTCCAGTCCGGTCGCGACACCATTGATACGGTTCTGAAAACAATCCTGCCGTTTATGGCGTT CGTTTCGGCGCTGATCGGCATCATTATGGCCTCAGGTCTTGGCGACTGGATCGCCCACGGCCTGGCGCCATTAGCCAGCC ATCCACTGGGGCTGGTGACGCTGGCATTGATCTGCTCTTTCCCGCTGCTGTCGCCCTTTCTCGGCCCTGGCGCGGTTATC GCTCAGGTCATTGGCGTCCTGATCGGCGTTCAGATAGGCCTGGGCAATATCCCCCCGCATCTGGCGCTTCCCGCCCTGTT CGCGATTAACGCGCAGGCGGCCTGCGACTTTATCCCGGTCGGCCTGTCACTGGCGGAAGCGAAACAAGACACCGTTCGCG TCGGCGTACCTTCCGTGCTGGTCGGACGCTTCCTGACTGGCGCGCCCACGGTACTTATCGCCTGGTTTGTTTCCGGCTTT ATCTATCAATAA
Upstream 100 bases:
>100_bases ACTTCTTCCGCGGTTGGGTAACCGATCTCACCACCGCTATTTTTGAGAAAAAAATGGGGATTCAACTTGAGCAGAAAGTT CATCTGACAGGAGCGGTATC
Downstream 100 bases:
>100_bases GAGGTTCAGACATGAGCGTGATTTATCAAACCACCATCACCCGTATCGGCCAGAGCGCGAAGGAGGCGCTCGGCGAACAG ATGCTGATTACGTTTCGGGA
Product: glucitol/sorbitol-specific phosphotransferase enzyme iib component
Products: NA
Alternate protein names: EII-Gut; PTS system glucitol/sorbitol-specific EIIB component [H]
Number of amino acids: Translated: 323; Mature: 322
Protein sequence:
>323_residues MTRVRIEKGAGGWGGPLELDVTPGKKIVYITAGTRPAIVDKLAQLTGWQAVDGFKEGEPPEAEIGAAIIDCGGTLRCGIY PKRRIPTINIHSTGKSGPLAQYIVEDIYVSGVKEENITLVGETPASPQPAKTTLGRDYDTSKKITEQSDGLLAKVGMGMG SAVAVLFQSGRDTIDTVLKTILPFMAFVSALIGIIMASGLGDWIAHGLAPLASHPLGLVTLALICSFPLLSPFLGPGAVI AQVIGVLIGVQIGLGNIPPHLALPALFAINAQAACDFIPVGLSLAEAKQDTVRVGVPSVLVGRFLTGAPTVLIAWFVSGF IYQ
Sequences:
>Translated_323_residues MTRVRIEKGAGGWGGPLELDVTPGKKIVYITAGTRPAIVDKLAQLTGWQAVDGFKEGEPPEAEIGAAIIDCGGTLRCGIY PKRRIPTINIHSTGKSGPLAQYIVEDIYVSGVKEENITLVGETPASPQPAKTTLGRDYDTSKKITEQSDGLLAKVGMGMG SAVAVLFQSGRDTIDTVLKTILPFMAFVSALIGIIMASGLGDWIAHGLAPLASHPLGLVTLALICSFPLLSPFLGPGAVI AQVIGVLIGVQIGLGNIPPHLALPALFAINAQAACDFIPVGLSLAEAKQDTVRVGVPSVLVGRFLTGAPTVLIAWFVSGF IYQ >Mature_322_residues TRVRIEKGAGGWGGPLELDVTPGKKIVYITAGTRPAIVDKLAQLTGWQAVDGFKEGEPPEAEIGAAIIDCGGTLRCGIYP KRRIPTINIHSTGKSGPLAQYIVEDIYVSGVKEENITLVGETPASPQPAKTTLGRDYDTSKKITEQSDGLLAKVGMGMGS AVAVLFQSGRDTIDTVLKTILPFMAFVSALIGIIMASGLGDWIAHGLAPLASHPLGLVTLALICSFPLLSPFLGPGAVIA QVIGVLIGVQIGLGNIPPHLALPALFAINAQAACDFIPVGLSLAEAKQDTVRVGVPSVLVGRFLTGAPTVLIAWFVSGFI YQ
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This
COG id: COG3732
COG function: function code G; Phosphotransferase system sorbitol-specific component IIBC
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIB type-5 domain [H]
Homologues:
Organism=Escherichia coli, GI48994905, Length=323, Percent_Identity=92.8792569659443, Blast_Score=597, Evalue=1e-172,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011638 - InterPro: IPR011618 - InterPro: IPR004702 [H]
Pfam domain/function: PF07663 EIIBC-GUT_C; PF03612 EIIBC-GUT_N [H]
EC number: =2.7.1.69 [H]
Molecular weight: Translated: 33656; Mature: 33525
Theoretical pI: Translated: 6.92; Mature: 6.92
Prosite motif: PS00107 PROTEIN_KINASE_ATP ; PS51102 PTS_EIIB_TYPE_5
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRVRIEKGAGGWGGPLELDVTPGKKIVYITAGTRPAIVDKLAQLTGWQAVDGFKEGEPP CCEEEEECCCCCCCCCEEEEECCCCEEEEEECCCCHHHHHHHHHHCCCHHHCCCCCCCCC EAEIGAAIIDCGGTLRCGIYPKRRIPTINIHSTGKSGPLAQYIVEDIYVSGVKEENITLV CHHHCEEEEECCCEEEECCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCEEEE GETPASPQPAKTTLGRDYDTSKKITEQSDGLLAKVGMGMGSAVAVLFQSGRDTIDTVLKT ECCCCCCCCCHHHCCCCCCCCHHHHHHCCCEEEECCCCCCHHHHHHHHCCCHHHHHHHHH ILPFMAFVSALIGIIMASGLGDWIAHGLAPLASHPLGLVTLALICSFPLLSPFLGPGAVI HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHH AQVIGVLIGVQIGLGNIPPHLALPALFAINAQAACDFIPVGLSLAEAKQDTVRVGVPSVL HHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHCCEEECCCHHHHHCCCCEECCCHHHH VGRFLTGAPTVLIAWFVSGFIYQ HHHHHCCCHHHHHHHHHHHHCCC >Mature Secondary Structure TRVRIEKGAGGWGGPLELDVTPGKKIVYITAGTRPAIVDKLAQLTGWQAVDGFKEGEPP CEEEEECCCCCCCCCEEEEECCCCEEEEEECCCCHHHHHHHHHHCCCHHHCCCCCCCCC EAEIGAAIIDCGGTLRCGIYPKRRIPTINIHSTGKSGPLAQYIVEDIYVSGVKEENITLV CHHHCEEEEECCCEEEECCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCEEEE GETPASPQPAKTTLGRDYDTSKKITEQSDGLLAKVGMGMGSAVAVLFQSGRDTIDTVLKT ECCCCCCCCCHHHCCCCCCCCHHHHHHCCCEEEECCCCCCHHHHHHHHCCCHHHHHHHHH ILPFMAFVSALIGIIMASGLGDWIAHGLAPLASHPLGLVTLALICSFPLLSPFLGPGAVI HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHH AQVIGVLIGVQIGLGNIPPHLALPALFAINAQAACDFIPVGLSLAEAKQDTVRVGVPSVL HHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHCCEEECCCHHHHHCCCCEECCCHHHH VGRFLTGAPTVLIAWFVSGFIYQ HHHHHCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 3553176; 9205837; 9278503 [H]