| Definition | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 chromosome, complete genome. |
|---|---|
| Accession | NC_011094 |
| Length | 4,709,075 |
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The map label for this gene is 194735987
Identifier: 194735987
GI number: 194735987
Start: 34380
End: 34817
Strand: Reverse
Name: 194735987
Synonym: SeSA_A0034
Alternate gene names: NA
Gene position: 34817-34380 (Counterclockwise)
Preceding gene: 194736342
Following gene: 194734441
Centisome position: 0.74
GC content: 35.84
Gene sequence:
>438_bases ATGACTATTTATTTAATTAACAGCACGCACACTTACAATGATAAGACCAATGAGCTAAAAAACATAAAAACGGGAAAGAT GATAAAAATTGCCGCAATGCGTATAAAGTGTCTGGAATATATGCTGAATCACGCGCAACAAGAGATTATTTATAAAAAAC AGCTCACTAATGAACTTTGGGGGGAAAGAAGTCAATTTATCAGCGACGCCAATCTGACCCAGATTTTATATCTACTGCGG CGCGACCTTAAAGGCTTTGGCCTGAGCCAGTTTTTTTCCACGGTGCCCCGAACTGGTATTAAAGTTGATGCTAACATTAT TATCAGCAATGAAAATAAAAACCATCCCTCTTCTTTAAAAAAAGAAGGGTATAAATATATGGCATTACTTTTCGCTTTAC TGACCATGGTCATAATGGTTATTTATTCAATACGATAA
Upstream 100 bases:
>100_bases TTCTCTGGAAAAAAGGCGCTATTACAGTCACGCCAGTTGATCCCTAAATTTAATATGCATATTATTATCGCCACCCCCAT TAAACCCATAAAATAACATC
Downstream 100 bases:
>100_bases TTTGATATTAAACCGACAAATCGCATAAGGATGTGCTTCCTTCAACCAAAGCGTCAGGCTGCTTTTCCTGGCTAAAAAGA AAGGTCGACTGAAATGTTGA
Product: putative transcription regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 145; Mature: 144
Protein sequence:
>145_residues MTIYLINSTHTYNDKTNELKNIKTGKMIKIAAMRIKCLEYMLNHAQQEIIYKKQLTNELWGERSQFISDANLTQILYLLR RDLKGFGLSQFFSTVPRTGIKVDANIIISNENKNHPSSLKKEGYKYMALLFALLTMVIMVIYSIR
Sequences:
>Translated_145_residues MTIYLINSTHTYNDKTNELKNIKTGKMIKIAAMRIKCLEYMLNHAQQEIIYKKQLTNELWGERSQFISDANLTQILYLLR RDLKGFGLSQFFSTVPRTGIKVDANIIISNENKNHPSSLKKEGYKYMALLFALLTMVIMVIYSIR >Mature_144_residues TIYLINSTHTYNDKTNELKNIKTGKMIKIAAMRIKCLEYMLNHAQQEIIYKKQLTNELWGERSQFISDANLTQILYLLRR DLKGFGLSQFFSTVPRTGIKVDANIIISNENKNHPSSLKKEGYKYMALLFALLTMVIMVIYSIR
Specific function: Unknown
COG id: COG3710
COG function: function code K; DNA-binding winged-HTH domains
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16871; Mature: 16740
Theoretical pI: Translated: 10.17; Mature: 10.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIYLINSTHTYNDKTNELKNIKTGKMIKIAAMRIKCLEYMLNHAQQEIIYKKQLTNELW CEEEEEECCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GERSQFISDANLTQILYLLRRDLKGFGLSQFFSTVPRTGIKVDANIIISNENKNHPSSLK CHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCCEEEEEEEEECCCCCCCHHHH KEGYKYMALLFALLTMVIMVIYSIR HHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TIYLINSTHTYNDKTNELKNIKTGKMIKIAAMRIKCLEYMLNHAQQEIIYKKQLTNELW EEEEEECCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GERSQFISDANLTQILYLLRRDLKGFGLSQFFSTVPRTGIKVDANIIISNENKNHPSSLK CHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCCEEEEEEEEECCCCCCCHHHH KEGYKYMALLFALLTMVIMVIYSIR HHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA