| Definition | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 chromosome, complete genome. |
|---|---|
| Accession | NC_011094 |
| Length | 4,709,075 |
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The map label for this gene is 194735867
Identifier: 194735867
GI number: 194735867
Start: 587617
End: 588441
Strand: Reverse
Name: 194735867
Synonym: SeSA_A0583
Alternate gene names: NA
Gene position: 588441-587617 (Counterclockwise)
Preceding gene: 194736771
Following gene: 194737701
Centisome position: 12.5
GC content: 51.64
Gene sequence:
>825_bases ATGAAGCGATTCGCGTTTGCCCTGTGGCTCAGCGCAATCTCGCTCAACGCTTATGCAGACAGTGCTAACTGTCACCAAAA AGCAAACACGCCGGAGAGCATCGCAGCGACAATGGATCAGGCGCTACAGCTCAAACAACAGCTTAACAGTCAACCCGATC CGGTCGTCATTCTGGTTCGCCAGGGGCAAGATATGTCGAGCCGACATTTAACCTGGTCACATGCTGGCTATGCCATGCGC CAGCCAAACGGAGACTGGCGGGTTTACCATAATCTGAATACTTGCGGAACCGCTGAATCAGCGCTCTATATACAAGGTCT GTATGAGTTTCTGGCTGATGACCTGGTGAATCAGAGCATTGCCGTTTTGCGCCCGCGTTCAGATATCGCGACGGCATTAC AAACGCTCTTACATAGCGCTATCAAACTCAATCTCTTCCACAGTCCCCGCTACAACCTGATTGCGTGGCCTTTTTCCGGC CCTTATCAGAATTCGAATGGCTGGCTTCTCGAAGTGTTTGCGCGAGCAAACGATGCGCAGGTTTGGTCACGTAATGATGC CCGCCGCTGGTTGCAGCTTCAGGGTTATCAACCCTCTATCGTTAGTGCTGGCACTTTTGAACGATTAGGCGCAAAACTGT TCACCCCTAACGTTTTCACCGACGATCAGCCAGCAGAATTGCTGCGAAAAGGAAATGTGGGGCTAAACAGCGGCGACAGC GTCATCCGCTTTATTGCCCGTTACAGCCGGGCAATACCCAAGTGTGAACATCAGAATCTGGGGGAGTCAGTGTGTGTTTA TCTTTCGCCCGGCGCGAAAAAATAA
Upstream 100 bases:
>100_bases AAGGCACCGGCGCTTATTTGAAAAAAGAGGGCAAAGTCCTTGCCCATATGGTAAATCAGGACGACGCAGGACTTTCCAGC AACCAGACGGTACCGGCCAA
Downstream 100 bases:
>100_bases AAAACAGGCCGTTCTATGCAAATAGAGCGGCCTGTAAAAGCGCTTACTTACGTCGCCAGGTGGTGCCCTGCGGGCCATCT TCCAGAATAATACCCATTTC
Product: putative outer membrane protein
Products: NA
Alternate protein names: Signal Peptide Protein; Exported Outer Membrane Protein
Number of amino acids: Translated: 274; Mature: 274
Protein sequence:
>274_residues MKRFAFALWLSAISLNAYADSANCHQKANTPESIAATMDQALQLKQQLNSQPDPVVILVRQGQDMSSRHLTWSHAGYAMR QPNGDWRVYHNLNTCGTAESALYIQGLYEFLADDLVNQSIAVLRPRSDIATALQTLLHSAIKLNLFHSPRYNLIAWPFSG PYQNSNGWLLEVFARANDAQVWSRNDARRWLQLQGYQPSIVSAGTFERLGAKLFTPNVFTDDQPAELLRKGNVGLNSGDS VIRFIARYSRAIPKCEHQNLGESVCVYLSPGAKK
Sequences:
>Translated_274_residues MKRFAFALWLSAISLNAYADSANCHQKANTPESIAATMDQALQLKQQLNSQPDPVVILVRQGQDMSSRHLTWSHAGYAMR QPNGDWRVYHNLNTCGTAESALYIQGLYEFLADDLVNQSIAVLRPRSDIATALQTLLHSAIKLNLFHSPRYNLIAWPFSG PYQNSNGWLLEVFARANDAQVWSRNDARRWLQLQGYQPSIVSAGTFERLGAKLFTPNVFTDDQPAELLRKGNVGLNSGDS VIRFIARYSRAIPKCEHQNLGESVCVYLSPGAKK >Mature_274_residues MKRFAFALWLSAISLNAYADSANCHQKANTPESIAATMDQALQLKQQLNSQPDPVVILVRQGQDMSSRHLTWSHAGYAMR QPNGDWRVYHNLNTCGTAESALYIQGLYEFLADDLVNQSIAVLRPRSDIATALQTLLHSAIKLNLFHSPRYNLIAWPFSG PYQNSNGWLLEVFARANDAQVWSRNDARRWLQLQGYQPSIVSAGTFERLGAKLFTPNVFTDDQPAELLRKGNVGLNSGDS VIRFIARYSRAIPKCEHQNLGESVCVYLSPGAKK
Specific function: Unknown
COG id: COG4727
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30667; Mature: 30667
Theoretical pI: Translated: 9.09; Mature: 9.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRFAFALWLSAISLNAYADSANCHQKANTPESIAATMDQALQLKQQLNSQPDPVVILVR CCHHHHHHHHHHHHHHCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE QGQDMSSRHLTWSHAGYAMRQPNGDWRVYHNLNTCGTAESALYIQGLYEFLADDLVNQSI CCCCCCCCCEEECCCCEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCE AVLRPRSDIATALQTLLHSAIKLNLFHSPRYNLIAWPFSGPYQNSNGWLLEVFARANDAQ EEECCCHHHHHHHHHHHHHHHEEEEEECCCCCEEEECCCCCCCCCCCEEEEEEECCCCCH VWSRNDARRWLQLQGYQPSIVSAGTFERLGAKLFTPNVFTDDQPAELLRKGNVGLNSGDS HHCCCHHHHHEEECCCCCCCCCCCCHHHHCCEEECCCCCCCCCHHHHHHCCCCCCCCCHH VIRFIARYSRAIPKCEHQNLGESVCVYLSPGAKK HHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCC >Mature Secondary Structure MKRFAFALWLSAISLNAYADSANCHQKANTPESIAATMDQALQLKQQLNSQPDPVVILVR CCHHHHHHHHHHHHHHCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE QGQDMSSRHLTWSHAGYAMRQPNGDWRVYHNLNTCGTAESALYIQGLYEFLADDLVNQSI CCCCCCCCCEEECCCCEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCE AVLRPRSDIATALQTLLHSAIKLNLFHSPRYNLIAWPFSGPYQNSNGWLLEVFARANDAQ EEECCCHHHHHHHHHHHHHHHEEEEEECCCCCEEEECCCCCCCCCCCEEEEEEECCCCCH VWSRNDARRWLQLQGYQPSIVSAGTFERLGAKLFTPNVFTDDQPAELLRKGNVGLNSGDS HHCCCHHHHHEEECCCCCCCCCCCCHHHHCCEEECCCCCCCCCHHHHHHCCCCCCCCCHH VIRFIARYSRAIPKCEHQNLGESVCVYLSPGAKK HHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA