| Definition | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 chromosome, complete genome. |
|---|---|
| Accession | NC_011094 |
| Length | 4,709,075 |
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The map label for this gene is 194735852
Identifier: 194735852
GI number: 194735852
Start: 2148221
End: 2148835
Strand: Reverse
Name: 194735852
Synonym: SeSA_A2272
Alternate gene names: NA
Gene position: 2148835-2148221 (Counterclockwise)
Preceding gene: 194735189
Following gene: 194738203
Centisome position: 45.63
GC content: 53.01
Gene sequence:
>615_bases ATGAACGAGTCTCAATTTCAGCAGGCGGCTGGTATCAGCGCCGAACTGGCCGCGCGCTGGTTTCCGCACATTGATGCGGC GATGAAGGAATTCGGCATTACAGCACCAGCGGATCAGGCGATGTTTATCGCTCAGGTAGGCCATGAGTCGATGGGGTTTA GCGCCGTAGTTGAAAATTTTAACTACACGCCATCTGCGCTGGTGGCGACGTTCGGAAAGAGGATCACACAGCAGCAGGCT GATGCCCTTGGCAGAACATCCGGACATGCAGCTCGTCAGGATGCTATTGCCAATCTGGTGTATAGCAACCGGCTGGGTAA CAAAGCACCCGGTGATGGCTGGAAATATCGTGGTAGAGGATTAATTCAAATCACTGGCCTCCATAATTATCGCATCTGTG GCGCGGCGCTGAAGTTAGATCTGGTGACTTCACCTGAACAACTGGAACAGGAACTACAGGCTGCGCGCTCAGCTGCATGG TTCTACACCTCTAAAGGTTGCATGATCTACGGTGCCGATATTAACCGTGTTACGCGCATCATTAACGGCGGTTTGAACGG TATTGAGGATCGTAAGGTCCGATACAACAAGGCGCGGGCGGCGCTGCTGGTATGA
Upstream 100 bases:
>100_bases TAGGTGGCGGCGTCGGCCTTATCGGCGTGGATGCGATCCGCGGCTTTGCAATGAAGTTTATCAGTGGTCGTATCGGTGGG GATAATAACAAGGTTTAATC
Downstream 100 bases:
>100_bases AGATGAGTTATTGGGCGCTCATTTTAACGTTTATTGCTTGTGTCGCTGGTGGTCTTGTCTGGTCAGCGAATCACTATCAT GGAAAGTTTCTGGAGGAGCA
Product: lytic enzyme
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 204; Mature: 204
Protein sequence:
>204_residues MNESQFQQAAGISAELAARWFPHIDAAMKEFGITAPADQAMFIAQVGHESMGFSAVVENFNYTPSALVATFGKRITQQQA DALGRTSGHAARQDAIANLVYSNRLGNKAPGDGWKYRGRGLIQITGLHNYRICGAALKLDLVTSPEQLEQELQAARSAAW FYTSKGCMIYGADINRVTRIINGGLNGIEDRKVRYNKARAALLV
Sequences:
>Translated_204_residues MNESQFQQAAGISAELAARWFPHIDAAMKEFGITAPADQAMFIAQVGHESMGFSAVVENFNYTPSALVATFGKRITQQQA DALGRTSGHAARQDAIANLVYSNRLGNKAPGDGWKYRGRGLIQITGLHNYRICGAALKLDLVTSPEQLEQELQAARSAAW FYTSKGCMIYGADINRVTRIINGGLNGIEDRKVRYNKARAALLV >Mature_204_residues MNESQFQQAAGISAELAARWFPHIDAAMKEFGITAPADQAMFIAQVGHESMGFSAVVENFNYTPSALVATFGKRITQQQA DALGRTSGHAARQDAIANLVYSNRLGNKAPGDGWKYRGRGLIQITGLHNYRICGAALKLDLVTSPEQLEQELQAARSAAW FYTSKGCMIYGADINRVTRIINGGLNGIEDRKVRYNKARAALLV
Specific function: Unknown
COG id: COG3179
COG function: function code R; Predicted chitinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To phage D29 and phage L5 gp10 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000726 [H]
Pfam domain/function: PF00182 Glyco_hydro_19 [H]
EC number: NA
Molecular weight: Translated: 22251; Mature: 22251
Theoretical pI: Translated: 9.61; Mature: 9.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNESQFQQAAGISAELAARWFPHIDAAMKEFGITAPADQAMFIAQVGHESMGFSAVVENF CCHHHHHHHHCCCHHHHHHHCHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCHHHHHHCC NYTPSALVATFGKRITQQQADALGRTSGHAARQDAIANLVYSNRLGNKAPGDGWKYRGRG CCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEECCCE LIQITGLHNYRICGAALKLDLVTSPEQLEQELQAARSAAWFYTSKGCMIYGADINRVTRI EEEEECCCCCEEEHHHEEEEECCCHHHHHHHHHHHHHHHEEEECCCCEEECCCHHHHHHH INGGLNGIEDRKVRYNKARAALLV HHCCCCCCCCHHHHHHHHHHEECC >Mature Secondary Structure MNESQFQQAAGISAELAARWFPHIDAAMKEFGITAPADQAMFIAQVGHESMGFSAVVENF CCHHHHHHHHCCCHHHHHHHCHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCHHHHHHCC NYTPSALVATFGKRITQQQADALGRTSGHAARQDAIANLVYSNRLGNKAPGDGWKYRGRG CCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEECCCE LIQITGLHNYRICGAALKLDLVTSPEQLEQELQAARSAAWFYTSKGCMIYGADINRVTRI EEEEECCCCCEEEHHHEEEEECCCHHHHHHHHHHHHHHHEEEECCCCEEECCCHHHHHHH INGGLNGIEDRKVRYNKARAALLV HHCCCCCCCCHHHHHHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]