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The map label for this gene is yhjK [H]

Identifier: 194735819

GI number: 194735819

Start: 3675687

End: 3677693

Strand: Reverse

Name: yhjK [H]

Synonym: SeSA_A3810

Alternate gene names: 194735819

Gene position: 3677693-3675687 (Counterclockwise)

Preceding gene: 194735245

Following gene: 194735283

Centisome position: 78.1

GC content: 54.51

Gene sequence:

>2007_bases
TTGCGCGTCAGCCGCTCGTTAACAATTAAACAGATGGCAATGGTTGCGGCCGTTGTCATGGTGTTTGTTTTTGTCTTTTG
CACCGTTTTGTTGTTCCATCTGGTACAGCAGAACCGCTACAACACGGCTACGCAACTGGAAAGCATCGCGCGATCTGTTC
GGGAACCTCTTTCTTCCGCGATTTTAAAAGCGGATCTCCCCGGCGCGGAAACCATTCTGGAAAGTATTAAACCTGCGGGC
GTGGTGAGTCGCGCCGATGTGGTATTGCCGAATCAGTTCCAGGCGTTGCGTAAGCGCTTCATTCCTGAACGCCCCGTCCC
GGTTATGGTGACGCGTCTCTTCGAACTGCCGGTACAAATTTCTTTGCCGGTTTATTCGCTGGAGCGTCCCGCCAATCCGC
AACCGCTGGCCTACCTTGTATTGCAGGCGGATTCGTACCGTATGTACAAATTCGTCATGAGCGCGCTCTCTACGTTAGTG
ACCATTTACTTACTTTTATCGCTGATCCTGACGGTGGCCATCGCCTGGTGCGTAAACCGCCTGATTGTGCATCCGCTGCG
CAAAATCGCCCGCGAGCTGAACGACATTCCGCAGCAGGAGCTGATCGGACATCAGCTGGCGTTGCCGCGTCTGCATCAGG
ATGATGAAATTGGGATGCTGGTGCGCAGCTATAACCTCAACCAGCAGCTTATGCAGCGTCAACGCGAGGAGCAAACGGAC
AACGCGATGCGTTTTCCGGTTTCCGAGCTGCCCAATAAAGCCTTTTTAATGGCGCTGCTGGAACAGGTTATCACCCGCCA
ACAGACCACCGCGCTTATTATCGTGACGTGCGAAACGTTGCGTGACACGGCAGGCGTGCTGCAAGAAACGCAGCGGGAGA
TTCTATTACTGACGTTGGTTGAGAAGCTGAAGTCGGTGCTGGCGCCGCGCATGGTGCTTACGCAGGTCAGCGGCTATGAC
TTTGCCATTATCGCCCACGGCGTCAAAGAGCCGTGGCACGCCATCACATTAGGTCAGCAAATACTCACTATCATTAATGA
ACGACTGCCCATTCAGGGTATTCAACTGCGCCCAAGCTGCAGTATTGGCATTGCGATGTATTATGGCGATCTGACCGCCG
AAGAGCTCTATGGTCGCGCCGTCTCCGCCGCGTTTACCGCGCGCCGAAAAGGTAAAAATCAGATCCAGTTCTTTGACCCG
GCGCAGATGGAGGCCGCTCAACAGCGCCTTACCGAAGAGAGCGATATCCTTACCGCGCTGGATAATCATCAGTTTGCCAT
TTGGCTGCAGCCGCAGGTCGAGATGCGCAGCGGCAACGTATTAAGCGCCGAAGCCTTGTTACGTATGCAGCAGCCGGACG
GTAGCTGGGAATTGCCGGAGGGGCTGATTGAGCGCATTGAATCCTGCGGCCTGATGGTCACAGTAGGCCATTGGGTGCTG
GAAGAGTCCTGCCGCCAGCTTGCCGCCTGGCAGGAGCGCGGCGTGACATTGCCGCTCTCCGTCAATCTTTCCGCGTTACA
GCTCATGCACCCTGGCATGGTATCGGAGCTGCTGGAATTGTTAAACCGCTATCGTATTCAACCGGGTACGCTGATTCTTG
AGGTCACTGAAAGCCGCCGTATCGACGATCCGCACGCTGCCGTCGCTATCTTACGTCCGTTACGTAATGCTGGCGTGCGT
ATCGCACTGGATGATTTTGGCATGGGTTACGCGGGGCTGCGCCAGTTACAGCATATGAAGTCGCTACCGGTCGATATCCT
TAAAATTGATAAAATGTTTGTCGATGGGTTACCGGATGATCACAGTATGGTGACGGCGATTATCCTGATGGCCCGCAGTC
TTAATTTACAATTGATTGCCGAGGGCGTGGAGAACGAGGCGCAACGCGCGTGGCTGGAACAGGCGGGAGTCAACGTCGCG
CAAGGCTTCCTGTTTGCTCGGCCCGTTCCCGCGGATATCTTTGAAGAACGGTATCTGTCGCACGAAAATCCTGATTACAA
AAGTTAA

Upstream 100 bases:

>100_bases
ACCGTTATTCAGAAAAGTCCTTTTCAGATACAGCCTCTCTTAATGCCGCTGCAATCGGGTATACTCAGGCGGCAGTCCGG
GATATCCAGGGAGAGTCAAT

Downstream 100 bases:

>100_bases
AAAAGGTCGCGCTTGTGCGAGCCAGCTCAAACTTTTTAACATTTTTGTTTCAATTATGATCCTGGCGCATTTCTGTCATG
TTGTGTGGGTGTTATTTTAA

Product: putative phosphodiesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 668; Mature: 668

Protein sequence:

>668_residues
MRVSRSLTIKQMAMVAAVVMVFVFVFCTVLLFHLVQQNRYNTATQLESIARSVREPLSSAILKADLPGAETILESIKPAG
VVSRADVVLPNQFQALRKRFIPERPVPVMVTRLFELPVQISLPVYSLERPANPQPLAYLVLQADSYRMYKFVMSALSTLV
TIYLLLSLILTVAIAWCVNRLIVHPLRKIARELNDIPQQELIGHQLALPRLHQDDEIGMLVRSYNLNQQLMQRQREEQTD
NAMRFPVSELPNKAFLMALLEQVITRQQTTALIIVTCETLRDTAGVLQETQREILLLTLVEKLKSVLAPRMVLTQVSGYD
FAIIAHGVKEPWHAITLGQQILTIINERLPIQGIQLRPSCSIGIAMYYGDLTAEELYGRAVSAAFTARRKGKNQIQFFDP
AQMEAAQQRLTEESDILTALDNHQFAIWLQPQVEMRSGNVLSAEALLRMQQPDGSWELPEGLIERIESCGLMVTVGHWVL
EESCRQLAAWQERGVTLPLSVNLSALQLMHPGMVSELLELLNRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVR
IALDDFGMGYAGLRQLQHMKSLPVDILKIDKMFVDGLPDDHSMVTAIILMARSLNLQLIAEGVENEAQRAWLEQAGVNVA
QGFLFARPVPADIFEERYLSHENPDYKS

Sequences:

>Translated_668_residues
MRVSRSLTIKQMAMVAAVVMVFVFVFCTVLLFHLVQQNRYNTATQLESIARSVREPLSSAILKADLPGAETILESIKPAG
VVSRADVVLPNQFQALRKRFIPERPVPVMVTRLFELPVQISLPVYSLERPANPQPLAYLVLQADSYRMYKFVMSALSTLV
TIYLLLSLILTVAIAWCVNRLIVHPLRKIARELNDIPQQELIGHQLALPRLHQDDEIGMLVRSYNLNQQLMQRQREEQTD
NAMRFPVSELPNKAFLMALLEQVITRQQTTALIIVTCETLRDTAGVLQETQREILLLTLVEKLKSVLAPRMVLTQVSGYD
FAIIAHGVKEPWHAITLGQQILTIINERLPIQGIQLRPSCSIGIAMYYGDLTAEELYGRAVSAAFTARRKGKNQIQFFDP
AQMEAAQQRLTEESDILTALDNHQFAIWLQPQVEMRSGNVLSAEALLRMQQPDGSWELPEGLIERIESCGLMVTVGHWVL
EESCRQLAAWQERGVTLPLSVNLSALQLMHPGMVSELLELLNRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVR
IALDDFGMGYAGLRQLQHMKSLPVDILKIDKMFVDGLPDDHSMVTAIILMARSLNLQLIAEGVENEAQRAWLEQAGVNVA
QGFLFARPVPADIFEERYLSHENPDYKS
>Mature_668_residues
MRVSRSLTIKQMAMVAAVVMVFVFVFCTVLLFHLVQQNRYNTATQLESIARSVREPLSSAILKADLPGAETILESIKPAG
VVSRADVVLPNQFQALRKRFIPERPVPVMVTRLFELPVQISLPVYSLERPANPQPLAYLVLQADSYRMYKFVMSALSTLV
TIYLLLSLILTVAIAWCVNRLIVHPLRKIARELNDIPQQELIGHQLALPRLHQDDEIGMLVRSYNLNQQLMQRQREEQTD
NAMRFPVSELPNKAFLMALLEQVITRQQTTALIIVTCETLRDTAGVLQETQREILLLTLVEKLKSVLAPRMVLTQVSGYD
FAIIAHGVKEPWHAITLGQQILTIINERLPIQGIQLRPSCSIGIAMYYGDLTAEELYGRAVSAAFTARRKGKNQIQFFDP
AQMEAAQQRLTEESDILTALDNHQFAIWLQPQVEMRSGNVLSAEALLRMQQPDGSWELPEGLIERIESCGLMVTVGHWVL
EESCRQLAAWQERGVTLPLSVNLSALQLMHPGMVSELLELLNRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVR
IALDDFGMGYAGLRQLQHMKSLPVDILKIDKMFVDGLPDDHSMVTAIILMARSLNLQLIAEGVENEAQRAWLEQAGVNVA
QGFLFARPVPADIFEERYLSHENPDYKS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HAMP domain [H]

Homologues:

Organism=Escherichia coli, GI226510982, Length=662, Percent_Identity=84.5921450151057, Blast_Score=1150, Evalue=0.0,
Organism=Escherichia coli, GI1787541, Length=428, Percent_Identity=33.1775700934579, Blast_Score=203, Evalue=3e-53,
Organism=Escherichia coli, GI87081921, Length=429, Percent_Identity=29.3706293706294, Blast_Score=187, Evalue=1e-48,
Organism=Escherichia coli, GI87081743, Length=236, Percent_Identity=36.0169491525424, Blast_Score=149, Evalue=7e-37,
Organism=Escherichia coli, GI1790496, Length=251, Percent_Identity=34.6613545816733, Blast_Score=143, Evalue=4e-35,
Organism=Escherichia coli, GI87081845, Length=246, Percent_Identity=31.7073170731707, Blast_Score=125, Evalue=6e-30,
Organism=Escherichia coli, GI1786507, Length=243, Percent_Identity=34.156378600823, Blast_Score=124, Evalue=3e-29,
Organism=Escherichia coli, GI87081980, Length=268, Percent_Identity=32.089552238806, Blast_Score=114, Evalue=2e-26,
Organism=Escherichia coli, GI1788849, Length=235, Percent_Identity=31.9148936170213, Blast_Score=111, Evalue=2e-25,
Organism=Escherichia coli, GI1788502, Length=250, Percent_Identity=29.6, Blast_Score=109, Evalue=6e-25,
Organism=Escherichia coli, GI87082096, Length=240, Percent_Identity=32.0833333333333, Blast_Score=107, Evalue=3e-24,
Organism=Escherichia coli, GI1787055, Length=260, Percent_Identity=26.5384615384615, Blast_Score=91, Evalue=2e-19,
Organism=Escherichia coli, GI1787410, Length=153, Percent_Identity=32.6797385620915, Blast_Score=72, Evalue=8e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160
- InterPro:   IPR001633
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00563 EAL; PF00990 GGDEF; PF00672 HAMP [H]

EC number: NA

Molecular weight: Translated: 75274; Mature: 75274

Theoretical pI: Translated: 6.46; Mature: 6.46

Prosite motif: PS50885 HAMP ; PS50883 EAL ; PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVSRSLTIKQMAMVAAVVMVFVFVFCTVLLFHLVQQNRYNTATQLESIARSVREPLSSA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
ILKADLPGAETILESIKPAGVVSRADVVLPNQFQALRKRFIPERPVPVMVTRLFELPVQI
HHHCCCCCHHHHHHHCCCCCCCCCCCEECCHHHHHHHHHCCCCCCHHHHHHHHHHCCEEE
SLPVYSLERPANPQPLAYLVLQADSYRMYKFVMSALSTLVTIYLLLSLILTVAIAWCVNR
ECCCEECCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIVHPLRKIARELNDIPQQELIGHQLALPRLHQDDEIGMLVRSYNLNQQLMQRQREEQTD
HHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHCC
NAMRFPVSELPNKAFLMALLEQVITRQQTTALIIVTCETLRDTAGVLQETQREILLLTLV
CCEECCHHHCCCHHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHH
EKLKSVLAPRMVLTQVSGYDFAIIAHGVKEPWHAITLGQQILTIINERLPIQGIQLRPSC
HHHHHHHCCHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCEEECCCC
SIGIAMYYGDLTAEELYGRAVSAAFTARRKGKNQIQFFDPAQMEAAQQRLTEESDILTAL
CEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHCCCHHHHHHHC
DNHQFAIWLQPQVEMRSGNVLSAEALLRMQQPDGSWELPEGLIERIESCGLMVTVGHWVL
CCCEEEEEECCCEEECCCCEEEHHHHHHCCCCCCCCCCCHHHHHHHHHCCEEEEHHHHHH
EESCRQLAAWQERGVTLPLSVNLSALQLMHPGMVSELLELLNRYRIQPGTLILEVTESRR
HHHHHHHHHHHHCCCEEEEECCHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEECCCCC
IDDPHAAVAILRPLRNAGVRIALDDFGMGYAGLRQLQHMKSLPVDILKIDKMFVDGLPDD
CCCHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCC
HSMVTAIILMARSLNLQLIAEGVENEAQRAWLEQAGVNVAQGFLFARPVPADIFEERYLS
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHC
HENPDYKS
CCCCCCCC
>Mature Secondary Structure
MRVSRSLTIKQMAMVAAVVMVFVFVFCTVLLFHLVQQNRYNTATQLESIARSVREPLSSA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
ILKADLPGAETILESIKPAGVVSRADVVLPNQFQALRKRFIPERPVPVMVTRLFELPVQI
HHHCCCCCHHHHHHHCCCCCCCCCCCEECCHHHHHHHHHCCCCCCHHHHHHHHHHCCEEE
SLPVYSLERPANPQPLAYLVLQADSYRMYKFVMSALSTLVTIYLLLSLILTVAIAWCVNR
ECCCEECCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIVHPLRKIARELNDIPQQELIGHQLALPRLHQDDEIGMLVRSYNLNQQLMQRQREEQTD
HHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHCC
NAMRFPVSELPNKAFLMALLEQVITRQQTTALIIVTCETLRDTAGVLQETQREILLLTLV
CCEECCHHHCCCHHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHH
EKLKSVLAPRMVLTQVSGYDFAIIAHGVKEPWHAITLGQQILTIINERLPIQGIQLRPSC
HHHHHHHCCHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCEEECCCC
SIGIAMYYGDLTAEELYGRAVSAAFTARRKGKNQIQFFDPAQMEAAQQRLTEESDILTAL
CEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHCCCHHHHHHHC
DNHQFAIWLQPQVEMRSGNVLSAEALLRMQQPDGSWELPEGLIERIESCGLMVTVGHWVL
CCCEEEEEECCCEEECCCCEEEHHHHHHCCCCCCCCCCCHHHHHHHHHCCEEEEHHHHHH
EESCRQLAAWQERGVTLPLSVNLSALQLMHPGMVSELLELLNRYRIQPGTLILEVTESRR
HHHHHHHHHHHHCCCEEEEECCHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEECCCCC
IDDPHAAVAILRPLRNAGVRIALDDFGMGYAGLRQLQHMKSLPVDILKIDKMFVDGLPDD
CCCHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCC
HSMVTAIILMARSLNLQLIAEGVENEAQRAWLEQAGVNVAQGFLFARPVPADIFEERYLS
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHC
HENPDYKS
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503; 10493123 [H]