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The map label for this gene is cbiM [H]

Identifier: 194735785

GI number: 194735785

Start: 2082499

End: 2083236

Strand: Reverse

Name: cbiM [H]

Synonym: SeSA_A2192

Alternate gene names: 194735785

Gene position: 2083236-2082499 (Counterclockwise)

Preceding gene: 194736005

Following gene: 194733948

Centisome position: 44.24

GC content: 54.2

Gene sequence:

>738_bases
ATGAAAATTGAACAGCAGCTTCGACAGTTGTCTTTCAGTGGACTGGCTGCAGCGCTATTGCTGATGGTTGTCCCGCAACA
GGCGTTTGCGATGCATATCATGGAGGGTTTTTTACCGCCAGTGTGGGCGCTGGCCTGGTGGTTACTGTTTTTACCCTGCT
TGTGGTATGGGCTGGTGCGCTTACGGCGTATTGTGCAGGAGGATAATCATCAGAAGGTACTGCTGGCGCTGTGCGGCGCG
TTTATTTTTGTCCTGTCCGCGCTCAAAATTCCGTCGGTAACGGGGAGTTGTTCACATCCGACCGGCGTTGGTCTGGCGGT
TATTTTGTTCGGGCCCGGGGTAGTGGCGATTCTCGGCGCGGTTGTGCTGTTGTTTCAGGCGCTATTGCTGGCGCACGGCG
GCCTGACGACGCTTGGCGCAAATGGAATGTCGATGGCGGTGATTGGCCCGGTTGTCGGTTATCTGGTGTGGAAAATGGCC
TGCCGTGCCGGACTGCGCCGCGATGTCGCCGTTTTTCTGTGTGCGATGCTGGCGGATTTGGCGACCTATTTTGTGACTTC
AGTCCAGCTTGGCGTTGCGTTTCCCGATCCCCATGCCGGAGCGACAGGGTCTGTTGTGAAGTTTATGGGGATTTTCTGCC
TCACACAGATTCCTGTCGCCATTGCCGAAGGTTTATTAACCGTCATGATTTATGACCAGTTAACCAAACGGCAAGTGATT
ACCGTACAAGGACATTAA

Upstream 100 bases:

>100_bases
CCGGCGAGCAGTGCTGGCGCCATCTCCACGAGGTCAACGATGATCGACCGTTGCCCTATTTTTCGACCATTCTGGTCAAT
AAACAGTGGGAGTATGCAGA

Downstream 100 bases:

>100_bases
AATGAAAAAAACGTTGATGTTGTTAGCGATGGTGGTGGCGCTGGTGATTCTGCCGTTTTTTATTAACCATGGCGGTGAAT
ATGGCGGTTCAGACGGCGAA

Product: cobalt transport protein CbiM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MKIEQQLRQLSFSGLAAALLLMVVPQQAFAMHIMEGFLPPVWALAWWLLFLPCLWYGLVRLRRIVQEDNHQKVLLALCGA
FIFVLSALKIPSVTGSCSHPTGVGLAVILFGPGVVAILGAVVLLFQALLLAHGGLTTLGANGMSMAVIGPVVGYLVWKMA
CRAGLRRDVAVFLCAMLADLATYFVTSVQLGVAFPDPHAGATGSVVKFMGIFCLTQIPVAIAEGLLTVMIYDQLTKRQVI
TVQGH

Sequences:

>Translated_245_residues
MKIEQQLRQLSFSGLAAALLLMVVPQQAFAMHIMEGFLPPVWALAWWLLFLPCLWYGLVRLRRIVQEDNHQKVLLALCGA
FIFVLSALKIPSVTGSCSHPTGVGLAVILFGPGVVAILGAVVLLFQALLLAHGGLTTLGANGMSMAVIGPVVGYLVWKMA
CRAGLRRDVAVFLCAMLADLATYFVTSVQLGVAFPDPHAGATGSVVKFMGIFCLTQIPVAIAEGLLTVMIYDQLTKRQVI
TVQGH
>Mature_245_residues
MKIEQQLRQLSFSGLAAALLLMVVPQQAFAMHIMEGFLPPVWALAWWLLFLPCLWYGLVRLRRIVQEDNHQKVLLALCGA
FIFVLSALKIPSVTGSCSHPTGVGLAVILFGPGVVAILGAVVLLFQALLLAHGGLTTLGANGMSMAVIGPVVGYLVWKMA
CRAGLRRDVAVFLCAMLADLATYFVTSVQLGVAFPDPHAGATGSVVKFMGIFCLTQIPVAIAEGLLTVMIYDQLTKRQVI
TVQGH

Specific function: Unknown

COG id: COG0310

COG function: function code P; ABC-type Co2+ transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CbiM family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002751
- InterPro:   IPR018024 [H]

Pfam domain/function: PF01891 CbiM [H]

EC number: NA

Molecular weight: Translated: 26299; Mature: 26299

Theoretical pI: Translated: 8.84; Mature: 8.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIEQQLRQLSFSGLAAALLLMVVPQQAFAMHIMEGFLPPVWALAWWLLFLPCLWYGLVR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
LRRIVQEDNHQKVLLALCGAFIFVLSALKIPSVTGSCSHPTGVGLAVILFGPGVVAILGA
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEHHHHCCCHHHHHHH
VVLLFQALLLAHGGLTTLGANGMSMAVIGPVVGYLVWKMACRAGLRRDVAVFLCAMLADL
HHHHHHHHHHHCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
ATYFVTSVQLGVAFPDPHAGATGSVVKFMGIFCLTQIPVAIAEGLLTVMIYDQLTKRQVI
HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEE
TVQGH
EEECC
>Mature Secondary Structure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EEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8501034; 11677609 [H]