Click here to switch to the map view.

The map label for this gene is quuQ [H]

Identifier: 194735755

GI number: 194735755

Start: 661576

End: 662379

Strand: Direct

Name: quuQ [H]

Synonym: SeSA_A0683

Alternate gene names: 194735755

Gene position: 661576-662379 (Clockwise)

Preceding gene: 194736069

Following gene: 194736946

Centisome position: 14.05

GC content: 52.24

Gene sequence:

>804_bases
GTGAAGCTTGAATCTGCGCTCAGACATTTTAGTCCTCAGGGAATGCACATCAGCGACGACGTGAAAGGAACCTCTCCGGA
TCGTCTCACCGGTACAGATGTAATGGCGGCTATTGGTACCACCAGCAGCCGCGCGCGGTTTGGTCTGGCCGCTTTCTTCG
GAAAGGCCGGGATCAGCAAAACGGATGAACAACAGGCTGTGCAGGCGCTGGCGCGTCACGCGATGGATACTGCACCGAAG
AACGTGCGCAAAGCTGCAGGTGGTGAATTTGGCTGGTGTATGCTGGTACTGGCGCAGTTTGCCTTTGCTGAGTATTCCCG
TTCGGCAGCTACCAGCGTGACCTGTCACACCTGCAAAGGCAGCGGATTAACCTCTCAGTATGAGGATGTGATAAAACATC
CTGGAGTCTTCAACTCTGACGGTATGGAAATCGTGCCTCCGAAAATCAAGCACGAACTGGTCAGGCGTGCATGTGTGGCA
TGTAACGGTAAAGGTGAGCTGTTCGCCCGGTGCCGTTGCGGTGGAAAAGGTGAAGTGCTCGACCGTATTGCGACAAAAGA
AAGAGGTGTACCGGTGTTCAAAACCTGTGAACGCTGTTCCGGAAATGGTTTTTCTCCGGTACCCTCTACGGCTGCATATA
AAGCGATTCTCAGGCGAGTTCCGGAATTACATGTCAGAACATGGACCCGCAACTGGAAACCATTCCTGGAGGCGCTGGTA
GATATTTGTTACCGGGAAGAGCGTAAGGCTGATGCTGCTTTTCAGAATGCGACCAGTTTTAGCGATGATTTCAACAAAAT
TTAG

Upstream 100 bases:

>100_bases
TCATTAGGGGGATTAGTATCATTGCGTTTATTGCATCGAAATGGATGTATATTGCAATAAGTGAGATAATAAATGCATCC
CACTTCCGGAGGAAATCATT

Downstream 100 bases:

>100_bases
TATTTTCACGACATATAGCTTGATTTTGTCTGAAACTGTCGTGTATGCTTCTAATCATGTGAAGTTGTACCTAAACAAAA
TGAATCATCGAAACCCTGCC

Product: gp23

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 267; Mature: 267

Protein sequence:

>267_residues
MKLESALRHFSPQGMHISDDVKGTSPDRLTGTDVMAAIGTTSSRARFGLAAFFGKAGISKTDEQQAVQALARHAMDTAPK
NVRKAAGGEFGWCMLVLAQFAFAEYSRSAATSVTCHTCKGSGLTSQYEDVIKHPGVFNSDGMEIVPPKIKHELVRRACVA
CNGKGELFARCRCGGKGEVLDRIATKERGVPVFKTCERCSGNGFSPVPSTAAYKAILRRVPELHVRTWTRNWKPFLEALV
DICYREERKADAAFQNATSFSDDFNKI

Sequences:

>Translated_267_residues
MKLESALRHFSPQGMHISDDVKGTSPDRLTGTDVMAAIGTTSSRARFGLAAFFGKAGISKTDEQQAVQALARHAMDTAPK
NVRKAAGGEFGWCMLVLAQFAFAEYSRSAATSVTCHTCKGSGLTSQYEDVIKHPGVFNSDGMEIVPPKIKHELVRRACVA
CNGKGELFARCRCGGKGEVLDRIATKERGVPVFKTCERCSGNGFSPVPSTAAYKAILRRVPELHVRTWTRNWKPFLEALV
DICYREERKADAAFQNATSFSDDFNKI
>Mature_267_residues
MKLESALRHFSPQGMHISDDVKGTSPDRLTGTDVMAAIGTTSSRARFGLAAFFGKAGISKTDEQQAVQALARHAMDTAPK
NVRKAAGGEFGWCMLVLAQFAFAEYSRSAATSVTCHTCKGSGLTSQYEDVIKHPGVFNSDGMEIVPPKIKHELVRRACVA
CNGKGELFARCRCGGKGEVLDRIATKERGVPVFKTCERCSGNGFSPVPSTAAYKAILRRVPELHVRTWTRNWKPFLEALV
DICYREERKADAAFQNATSFSDDFNKI

Specific function: Positively regulate expression of some phage genes. Bacterial host RNA polymerase modified by antitermination proteins transcribes through termination sites that otherwise prevent expression of the regulated genes [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phage antitermination Q type 2 family [H]

Homologues:

Organism=Escherichia coli, GI87081935, Length=259, Percent_Identity=38.2239382239382, Blast_Score=165, Evalue=3e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003222
- InterPro:   IPR001305 [H]

Pfam domain/function: PF03589 Antiterm [H]

EC number: NA

Molecular weight: Translated: 29202; Mature: 29202

Theoretical pI: Translated: 9.20; Mature: 9.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLESALRHFSPQGMHISDDVKGTSPDRLTGTDVMAAIGTTSSRARFGLAAFFGKAGISK
CCHHHHHHHCCCCCCEECCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHCCCCC
TDEQQAVQALARHAMDTAPKNVRKAAGGEFGWCMLVLAQFAFAEYSRSAATSVTCHTCKG
CCHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCEEEEEECCC
SGLTSQYEDVIKHPGVFNSDGMEIVPPKIKHELVRRACVACNGKGELFARCRCGGKGEVL
CCCCHHHHHHHHCCCCCCCCCCEECCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHH
DRIATKERGVPVFKTCERCSGNGFSPVPSTAAYKAILRRVPELHVRTWTRNWKPFLEALV
HHHHHHHCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHH
DICYREERKADAAFQNATSFSDDFNKI
HHHHHHHHHHHHHHHHCCCCCHHHCCC
>Mature Secondary Structure
MKLESALRHFSPQGMHISDDVKGTSPDRLTGTDVMAAIGTTSSRARFGLAAFFGKAGISK
CCHHHHHHHCCCCCCEECCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHCCCCC
TDEQQAVQALARHAMDTAPKNVRKAAGGEFGWCMLVLAQFAFAEYSRSAATSVTCHTCKG
CCHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCEEEEEECCC
SGLTSQYEDVIKHPGVFNSDGMEIVPPKIKHELVRRACVACNGKGELFARCRCGGKGEVL
CCCCHHHHHHHHCCCCCCCCCCEECCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHH
DRIATKERGVPVFKTCERCSGNGFSPVPSTAAYKAILRRVPELHVRTWTRNWKPFLEALV
HHHHHHHCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHH
DICYREERKADAAFQNATSFSDDFNKI
HHHHHHHHHHHHHHHHCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]