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The map label for this gene is ynaI [C]

Identifier: 194735728

GI number: 194735728

Start: 1310655

End: 1311788

Strand: Reverse

Name: ynaI [C]

Synonym: SeSA_A1350

Alternate gene names: 194735728

Gene position: 1311788-1310655 (Counterclockwise)

Preceding gene: 194735637

Following gene: 194735599

Centisome position: 27.86

GC content: 48.24

Gene sequence:

>1134_bases
ATGGAGTATTTAGCACGACTAAATATCGTTGCGATGCTGATGTCAACGACGTTCTGGATCAATCTGGCGGTCGTTTTTTT
CGTCACCCTCATTACTTACTGGCTCATCAACTGGCTACTTAATGTGGTCTATAAAGCGCTACAACGCCCGGATAAAAAGG
ATGATGCTCATGGGCGGCTGCGGCCTATTGTTTTCGAGATGCTGAAAAAGACCAGTAAAATGCTCATCTTTTTTGCCGCA
TTTCTCTTTAGTCTGCGCTTTGTCGCCCTGCCCGACCGGTTATTCTCTACCCTCTCTCACGCCTGGTTTTTAGTGGTTGC
GATTCAAATGGCGATTTGGCTTGATCAGGGCGTACAGTCATGGATGCGTCATTTACTGTATGCCCCAGGCTCCAATAAAA
ACCCGGTGACGTTAGTCATTCTTGGTATGATTTTGCGCGTGCTCGTCTGGTCTATGATGTTGCTCTCCATCCTGGCGAAC
GTCGGCGTGGATATTACCGCACTGGTAGCCAGCCTCGGCGTGGGCGGTATTGCTATTGCCCTGGCGGTACAAACCGTTCT
GAGCGATGTCTTCGCTTCGCTGTCGATTGGTTTCGATAAGCCCTTCGAGATCGGCGATTTCGTCGTCTTTAATGATGTAG
CCGGTACGATTGAACATATCGGTTTGAAAACCACTCGCATCCGTAGCCTCAGCGGCGAACAGATTGTTTGTGCGAACGCG
CAGTTGTTGCAGCAAACCATACACAACTATAAGCGGATGCAAACGCGTCGTATCGTGTTTACTTTTGGCGTCGCCACTGC
GACACCGCCGGAAAAGTTACGCTTCATCGGCGATATGGTGAAAAAGATTATTACCGATGTCGGCGAAACACAATTCGACC
GCGCCCATCTACTGGCCTTTGGTCAGGATCGGCTGACCTATGAGGTAGTGCATATCGTCAATACCGCGGATTACAATAAA
TACATGGATATTCAGCAAGAGATAAATATCCGTATTATTGAAAAACTCATTGAGAATGATATCGAACTGGCGCTGCCAAG
TCTGGTCGTCAGAGCTCCTGTACAGGTTGAAGAGACCAGGGACTACAGTAATACCGCTGATGCAAAAAACGCAGATAAAC
GCGTCATGCAATAA

Upstream 100 bases:

>100_bases
ACAAAAGTGCTGAATAAAACAGCAATAGTAAAGCCGGAAATTGGCCTCCGTGATGTGACGTCTATACTGTAATGTTCATC
TGCTTTTCATCGGAGGTAAA

Downstream 100 bases:

>100_bases
AATCTCTGCCGACAATAACGGGAACCCATGGGTTCCCGGTGCGTTAACGGCGACACGGCAATGCGGAGAAACGACTTGCG
GCTATTCCACCTGTAAATGG

Product: MscS Mechanosensitive ion channel

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 377; Mature: 377

Protein sequence:

>377_residues
MEYLARLNIVAMLMSTTFWINLAVVFFVTLITYWLINWLLNVVYKALQRPDKKDDAHGRLRPIVFEMLKKTSKMLIFFAA
FLFSLRFVALPDRLFSTLSHAWFLVVAIQMAIWLDQGVQSWMRHLLYAPGSNKNPVTLVILGMILRVLVWSMMLLSILAN
VGVDITALVASLGVGGIAIALAVQTVLSDVFASLSIGFDKPFEIGDFVVFNDVAGTIEHIGLKTTRIRSLSGEQIVCANA
QLLQQTIHNYKRMQTRRIVFTFGVATATPPEKLRFIGDMVKKIITDVGETQFDRAHLLAFGQDRLTYEVVHIVNTADYNK
YMDIQQEINIRIIEKLIENDIELALPSLVVRAPVQVEETRDYSNTADAKNADKRVMQ

Sequences:

>Translated_377_residues
MEYLARLNIVAMLMSTTFWINLAVVFFVTLITYWLINWLLNVVYKALQRPDKKDDAHGRLRPIVFEMLKKTSKMLIFFAA
FLFSLRFVALPDRLFSTLSHAWFLVVAIQMAIWLDQGVQSWMRHLLYAPGSNKNPVTLVILGMILRVLVWSMMLLSILAN
VGVDITALVASLGVGGIAIALAVQTVLSDVFASLSIGFDKPFEIGDFVVFNDVAGTIEHIGLKTTRIRSLSGEQIVCANA
QLLQQTIHNYKRMQTRRIVFTFGVATATPPEKLRFIGDMVKKIITDVGETQFDRAHLLAFGQDRLTYEVVHIVNTADYNK
YMDIQQEINIRIIEKLIENDIELALPSLVVRAPVQVEETRDYSNTADAKNADKRVMQ
>Mature_377_residues
MEYLARLNIVAMLMSTTFWINLAVVFFVTLITYWLINWLLNVVYKALQRPDKKDDAHGRLRPIVFEMLKKTSKMLIFFAA
FLFSLRFVALPDRLFSTLSHAWFLVVAIQMAIWLDQGVQSWMRHLLYAPGSNKNPVTLVILGMILRVLVWSMMLLSILAN
VGVDITALVASLGVGGIAIALAVQTVLSDVFASLSIGFDKPFEIGDFVVFNDVAGTIEHIGLKTTRIRSLSGEQIVCANA
QLLQQTIHNYKRMQTRRIVFTFGVATATPPEKLRFIGDMVKKIITDVGETQFDRAHLLAFGQDRLTYEVVHIVNTADYNK
YMDIQQEINIRIIEKLIENDIELALPSLVVRAPVQVEETRDYSNTADAKNADKRVMQ

Specific function: Unknown

COG id: COG0668

COG function: function code M; Small-conductance mechanosensitive channel

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mscS (TC 1.A.23) family [H]

Homologues:

Organism=Escherichia coli, GI1787591, Length=213, Percent_Identity=23.943661971831, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1789291, Length=197, Percent_Identity=28.9340101522843, Blast_Score=77, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010920
- InterPro:   IPR011066
- InterPro:   IPR006685
- InterPro:   IPR006686
- InterPro:   IPR011014 [H]

Pfam domain/function: PF00924 MS_channel [H]

EC number: NA

Molecular weight: Translated: 42684; Mature: 42684

Theoretical pI: Translated: 9.19; Mature: 9.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCCCCCCCHHHCCC
>Mature Secondary Structure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CCCCCCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]