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The map label for this gene is sgrR [H]

Identifier: 194735618

GI number: 194735618

Start: 3943105

End: 3944895

Strand: Direct

Name: sgrR [H]

Synonym: SeSA_A4069

Alternate gene names: 194735618

Gene position: 3943105-3944895 (Clockwise)

Preceding gene: 194734695

Following gene: 194736421

Centisome position: 83.73

GC content: 55.83

Gene sequence:

>1791_bases
TTGCTCATTCCCGTTCGGGAAATTTCACCTTTTATGACAACCCGGCACACTGAACAAAAATATTTAAAGCTACTCCAGCA
CTATGGCGACAAGCCTGTTAGCGTGACATTACAGGAGCTGGCGGATGTGTTGTTCTGCACCCGGCGGCATATGCGTAATC
TGTTGCTTCAGATGCAGGAGGCAAAGTGGCTCATCTGGCAATCACAGGCCGGACGTGGGCATCGCGCCCGGCTTCACCTG
CGCTATAAACCAGAACAGCTGTTAAGCGAAAAGGCGGAGCAGTTGCTGGAGTCTGGTCATGTTGATCAGGCCATTCAACT
GCTGGGTAAAAATAAGCACCAGGTGGCGCAACTGTTGCGTTCAAAGCTGGGCTATAGCGTGCGGGCAGACTATCAGCGGC
TGTGCATCCCCTATTACCGGACAATGCCGTCGCTATGCCCCGGCATACCGTTGCGTCGCTCTGAGCAGCATCTGGTCAGG
CAGATTTTTAGCGGCCTGACGCGCATAAATGAGGAAAAAGGTGAAATCGAAGCCGATCTTGCCCACCACTGGCGGCAGAT
TGATCCACTGCGCTGGCGTTTTTATCTGCGCCCCGCCGTCCTCTGGCATGATGGTCAGGAGCTGACGATCGACGCGGTTA
TCGCTTCACTGACCCGCAGCGCTAAGCTGCCGTTGTTCTCGCACTTGCAGACCATTCAGGCCACCGGGCCGCTGAGTCTT
GAAATTACGCTGGCGCACCCGGATAACCGACTGCCGCTGCTGCTCAGTCATATTGATGCCATGATCCTACCGCCTGATCA
TACACAACGCGCTGATTTCCCGGCACATCCTGTGGGGACTGGCCCTTATGAGGTGGTGGAAAACAATGGCTTTCATCTGC
AAATGAAGGCCTTTGACCACTACTTTGGTCTGCGCGGGCTGCTGGATGAAGTGGAGGTCTTTATCTGGCCGAATTTAACG
GAGACAGACAACCTGGCGGAATCGCTGTCGGATAACGACACGGCAGCCTGGCTCAGCTCCAGCCTGAGCGATGAGGATTA
CGTTTCCGGACGGCTTAGCCAGGTAGCGGGCAAACCTTCTGACAACCTGCGCGAGATGTTTCTTGAGCGTGGAGGCTATT
TTTTATTATGCGACAGCCGCTCCCCGCACTGGCATACCGCCGAACATCGCCGCTGGCTGCGGGAAACACTCAGCCCTTAC
GCCATACTCCAGCATCTGAGTGAGGCAATTCGCCCCTTCTGGGTACCGGGCGGCAGCCTGCTGTCCTCCTGGTTTCATAC
TATTGAGGCGGGCCCGGCCTGTTCACCTTTTATCTCGTCGTCGCCCTACGCGAAACTGCGTCTGGCCTATCACGATCAGC
ACCCTGAATTTCCAATGCTTCTGGATATCATGCAAAAGATCATGCGCCAGCAGGGCATTTTACTTGAGGGCGTTGCACTG
AATTATGATGACTGGGCAAGCGGCAAGGCCGAGGTTGATCTCTGGCTGGGGACAGTTAATTTCCCCATTCCCGAAGAGTG
GAACGTCGGTACATGGCTGCTGGGCTCCCCTTTACTGCGCCACGCCATCAGCGGTGGGGATGATGCGCTGCTGGCCCAAT
GGGAAACCCAGTGGCATGCCGAAACCATCAGCGCGGAACAACTGGTCAGGGAAACCACCCGTTCAGGCTGGCTACAACCG
CTTTTTCACCACTGGATGCGACTCAAAGGCCCCGACCGGGCCAGGGGGATCCACCTGAATAACCTGGGGTGGTTTGATTT
CCGATCCACCTGGATTGAGCCAGGGCCTTAA

Upstream 100 bases:

>100_bases
CATGCAGACCTGCGTGTCTTTATTAATGCGCTTTGTCATGATGAATCCTCATAGAAGTTGCGATAGAGAAAATCATCGGC
TAAAAAGGGGATATTAAAAA

Downstream 100 bases:

>100_bases
AGAAGAGAATGTGACCGGGTGCCCGTAGCGCAGGCCGGCGTAGCACCTCTTAGTCGCTCTTCAGCCACCATAGAGAAAGA
ACAGCGCCTGTCACGGCGCA

Product: HTH-type transcriptional regulator SgrR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 596; Mature: 596

Protein sequence:

>596_residues
MLIPVREISPFMTTRHTEQKYLKLLQHYGDKPVSVTLQELADVLFCTRRHMRNLLLQMQEAKWLIWQSQAGRGHRARLHL
RYKPEQLLSEKAEQLLESGHVDQAIQLLGKNKHQVAQLLRSKLGYSVRADYQRLCIPYYRTMPSLCPGIPLRRSEQHLVR
QIFSGLTRINEEKGEIEADLAHHWRQIDPLRWRFYLRPAVLWHDGQELTIDAVIASLTRSAKLPLFSHLQTIQATGPLSL
EITLAHPDNRLPLLLSHIDAMILPPDHTQRADFPAHPVGTGPYEVVENNGFHLQMKAFDHYFGLRGLLDEVEVFIWPNLT
ETDNLAESLSDNDTAAWLSSSLSDEDYVSGRLSQVAGKPSDNLREMFLERGGYFLLCDSRSPHWHTAEHRRWLRETLSPY
AILQHLSEAIRPFWVPGGSLLSSWFHTIEAGPACSPFISSSPYAKLRLAYHDQHPEFPMLLDIMQKIMRQQGILLEGVAL
NYDDWASGKAEVDLWLGTVNFPIPEEWNVGTWLLGSPLLRHAISGGDDALLAQWETQWHAETISAEQLVRETTRSGWLQP
LFHHWMRLKGPDRARGIHLNNLGWFDFRSTWIEPGP

Sequences:

>Translated_596_residues
MLIPVREISPFMTTRHTEQKYLKLLQHYGDKPVSVTLQELADVLFCTRRHMRNLLLQMQEAKWLIWQSQAGRGHRARLHL
RYKPEQLLSEKAEQLLESGHVDQAIQLLGKNKHQVAQLLRSKLGYSVRADYQRLCIPYYRTMPSLCPGIPLRRSEQHLVR
QIFSGLTRINEEKGEIEADLAHHWRQIDPLRWRFYLRPAVLWHDGQELTIDAVIASLTRSAKLPLFSHLQTIQATGPLSL
EITLAHPDNRLPLLLSHIDAMILPPDHTQRADFPAHPVGTGPYEVVENNGFHLQMKAFDHYFGLRGLLDEVEVFIWPNLT
ETDNLAESLSDNDTAAWLSSSLSDEDYVSGRLSQVAGKPSDNLREMFLERGGYFLLCDSRSPHWHTAEHRRWLRETLSPY
AILQHLSEAIRPFWVPGGSLLSSWFHTIEAGPACSPFISSSPYAKLRLAYHDQHPEFPMLLDIMQKIMRQQGILLEGVAL
NYDDWASGKAEVDLWLGTVNFPIPEEWNVGTWLLGSPLLRHAISGGDDALLAQWETQWHAETISAEQLVRETTRSGWLQP
LFHHWMRLKGPDRARGIHLNNLGWFDFRSTWIEPGP
>Mature_596_residues
MLIPVREISPFMTTRHTEQKYLKLLQHYGDKPVSVTLQELADVLFCTRRHMRNLLLQMQEAKWLIWQSQAGRGHRARLHL
RYKPEQLLSEKAEQLLESGHVDQAIQLLGKNKHQVAQLLRSKLGYSVRADYQRLCIPYYRTMPSLCPGIPLRRSEQHLVR
QIFSGLTRINEEKGEIEADLAHHWRQIDPLRWRFYLRPAVLWHDGQELTIDAVIASLTRSAKLPLFSHLQTIQATGPLSL
EITLAHPDNRLPLLLSHIDAMILPPDHTQRADFPAHPVGTGPYEVVENNGFHLQMKAFDHYFGLRGLLDEVEVFIWPNLT
ETDNLAESLSDNDTAAWLSSSLSDEDYVSGRLSQVAGKPSDNLREMFLERGGYFLLCDSRSPHWHTAEHRRWLRETLSPY
AILQHLSEAIRPFWVPGGSLLSSWFHTIEAGPACSPFISSSPYAKLRLAYHDQHPEFPMLLDIMQKIMRQQGILLEGVAL
NYDDWASGKAEVDLWLGTVNFPIPEEWNVGTWLLGSPLLRHAISGGDDALLAQWETQWHAETISAEQLVRETTRSGWLQP
LFHHWMRLKGPDRARGIHLNNLGWFDFRSTWIEPGP

Specific function: Activates the small RNA gene sgrS under glucose- phosphate stress conditions as well as yfdZ. Represses its own transcription under both stress and non-stress conditions. Might act as a sensor of the intracellular accumulation of phosphoglucose by binding

COG id: COG4533

COG function: function code R; ABC-type uncharacterized transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1786256, Length=583, Percent_Identity=39.451114922813, Blast_Score=403, Evalue=1e-113,
Organism=Escherichia coli, GI1786650, Length=614, Percent_Identity=30.2931596091205, Blast_Score=193, Evalue=3e-50,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 68568; Mature: 68568

Theoretical pI: Translated: 6.86; Mature: 6.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIPVREISPFMTTRHTEQKYLKLLQHYGDKPVSVTLQELADVLFCTRRHMRNLLLQMQE
CCCCCHHCCHHHHHCCCHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHH
AKWLIWQSQAGRGHRARLHLRYKPEQLLSEKAEQLLESGHVDQAIQLLGKNKHQVAQLLR
CCEEEEECCCCCCCEEEEEEEECHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHH
SKLGYSVRADYQRLCIPYYRTMPSLCPGIPLRRSEQHLVRQIFSGLTRINEEKGEIEADL
HHCCCCHHCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHH
AHHWRQIDPLRWRFYLRPAVLWHDGQELTIDAVIASLTRSAKLPLFSHLQTIQATGPLSL
HHHHHHCCCCEEEEEECCEEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEE
EITLAHPDNRLPLLLSHIDAMILPPDHTQRADFPAHPVGTGPYEVVENNGFHLQMKAFDH
EEEEECCCCCCHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCHHHCCCCCCEEEEEHHHH
YFGLRGLLDEVEVFIWPNLTETDNLAESLSDNDTAAWLSSSLSDEDYVSGRLSQVAGKPS
HHHHHHHHHHCEEEECCCCCCHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCC
DNLREMFLERGGYFLLCDSRSPHWHTAEHRRWLRETLSPYAILQHLSEAIRPFWVPGGSL
HHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCEEECCCHHH
LSSWFHTIEAGPACSPFISSSPYAKLRLAYHDQHPEFPMLLDIMQKIMRQQGILLEGVAL
HHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEEE
NYDDWASGKAEVDLWLGTVNFPIPEEWNVGTWLLGSPLLRHAISGGDDALLAQWETQWHA
CCCCCCCCCEEEEEEEEEECCCCCCCCCCCEEECCCHHHHHHHCCCCCCEEEHHHHHHHH
ETISAEQLVRETTRSGWLQPLFHHWMRLKGPDRARGIHLNNLGWFDFRSTWIEPGP
HHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCEEECCCCCCCHHHCCCCCCC
>Mature Secondary Structure
MLIPVREISPFMTTRHTEQKYLKLLQHYGDKPVSVTLQELADVLFCTRRHMRNLLLQMQE
CCCCCHHCCHHHHHCCCHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHH
AKWLIWQSQAGRGHRARLHLRYKPEQLLSEKAEQLLESGHVDQAIQLLGKNKHQVAQLLR
CCEEEEECCCCCCCEEEEEEEECHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHH
SKLGYSVRADYQRLCIPYYRTMPSLCPGIPLRRSEQHLVRQIFSGLTRINEEKGEIEADL
HHCCCCHHCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHH
AHHWRQIDPLRWRFYLRPAVLWHDGQELTIDAVIASLTRSAKLPLFSHLQTIQATGPLSL
HHHHHHCCCCEEEEEECCEEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEE
EITLAHPDNRLPLLLSHIDAMILPPDHTQRADFPAHPVGTGPYEVVENNGFHLQMKAFDH
EEEEECCCCCCHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCHHHCCCCCCEEEEEHHHH
YFGLRGLLDEVEVFIWPNLTETDNLAESLSDNDTAAWLSSSLSDEDYVSGRLSQVAGKPS
HHHHHHHHHHCEEEECCCCCCHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCC
DNLREMFLERGGYFLLCDSRSPHWHTAEHRRWLRETLSPYAILQHLSEAIRPFWVPGGSL
HHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCEEECCCHHH
LSSWFHTIEAGPACSPFISSSPYAKLRLAYHDQHPEFPMLLDIMQKIMRQQGILLEGVAL
HHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEEE
NYDDWASGKAEVDLWLGTVNFPIPEEWNVGTWLLGSPLLRHAISGGDDALLAQWETQWHA
CCCCCCCCCEEEEEEEEEECCCCCCCCCCCEEECCCHHHHHHHCCCCCCEEEHHHHHHHH
ETISAEQLVRETTRSGWLQPLFHHWMRLKGPDRARGIHLNNLGWFDFRSTWIEPGP
HHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCEEECCCCCCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA