Click here to switch to the map view.

The map label for this gene is yaaU [H]

Identifier: 194735488

GI number: 194735488

Start: 92106

End: 93512

Strand: Direct

Name: yaaU [H]

Synonym: SeSA_A0089

Alternate gene names: 194735488

Gene position: 92106-93512 (Clockwise)

Preceding gene: 194734964

Following gene: 194736265

Centisome position: 1.96

GC content: 54.16

Gene sequence:

>1407_bases
ATGGCGGCGGAAACGCCTTATCCGGCCTACAGATGCGCTTTGCCCGTGTTGAAACAGGACATCACCATGCAGCAGCCCAG
GAACTTTGATGACCTTAAATTCTCCTCCATTCATCGCAGAATTATGCTGTGGGGAAGCGGCGGCCCGTTCCTTGATGGCT
ACGTGCTGGTGATCATTGGCGTGGCGCTGGAACAACTGACGCCGCTATTGCACCTTGATGCTGAATGGATTGGCGCGCTC
GGTGCGGCTACGCTTGCCGGACTGTTTATCGGCACCTCGTTGTTTGGCTATATTTGCGATAAAGTCGGGCGGCGTAAAAT
GTTCCTGCTTGATATTATCGCTATCGGCGTTATCTCCGTGGCGACCATGTTTGTTTCCACGCCGCTTGAATTGCTGGTGA
TGCGCGTTTTAATTGGCATTGTTATCGGCGCGGATTACCCTATCGCCACTTCCATGATTACGGAGTTTTCCAACACCCGC
CAGCGCGCGTTCTCCATCGGTTTTATCGCCGCGATGTGGTACGTCGGCGCGACCTGCGCCAACCTGGTGGGTTACTGGCT
GTATGACATGGAAGGCGGCTGGCGCTGGATGCTTGGCAGCGCCTTTATCCCGTGCTTAATCATTTTGATTGGCCGCTTTG
ACCTGCCGGAATCGCCACGCTGGCTATTGCGAAAAGGACGGGTAAAAGAGTGCGAACAAATGATGATCAAACTGTTCGGC
GAACCGGTCTGCTTTGACGATGAGCCGCCGCAGGAGACCCGCTTCCTGCAACTGTTTAATCGCCGTCATTTCCCGTTTGT
ACTGTTCGTTGCGGCTATCTGGACCTGTCAGGTAATCCCGATGTTCGCTATCTATACCTTTGGGCCGCAGATCGTCGGGT
TACTCGGCTGGGAGCAGGGGCGCAACGCGGCGCTCGGCAATGTGGTGATTAGCCTCTTTTTTATGCTGGGCTGTATACCA
GCGATGTTCTGGCTAAACAGTATTGGCCGTCGCCCTCTGCTTATTGGCAGCTTCGCCATGATGACTATCGCGCTGGCACT
GCTGGGGCTGGTGTCAAATCTGGGCATCATACTGGTCGTGGTGGCGTTTGCGGTATACGCCTTCTTTTCCGGCGGGCCGG
GCATACTGCAATGGCTTTATCCTAATGAACTCTTCCCGACGGATATTCGCGCTTCGGCCGTGGGGGTCATCATGTCATTA
AGCCGCATCGGAACCATTGTCTCCACCTGGGCATTACCAATTTTTATTACTCGTTACGGCATTAATAACGTCATGCTGAT
TGGCGCGTTGATTTCGTTAGTCGGGCTTGGCGTATCGGTGATGTTTGCCCCGGAAACTCGCGGCTTGACGCTAACACAGA
CCGGAAACATGACTTTGCGCGGAACGCCATCGGATAACCCTCGTTAA

Upstream 100 bases:

>100_bases
TGGAGTTCCGCTACGGCTAATAAGTACGAAGTTGTGCCCCCGTTGGCCGGATAAGATGCGGTAGCGTCGCCATCCGGCAA
TCATGTGGCGCCAATGCCGG

Downstream 100 bases:

>100_bases
GAGTGTTCTGCATTTCTCCTTGCTTTTCGCCAATAACGCTACAGTTAACAGTCACATGCTAAAACAACTGAAAAGCAGGG
AGAACACCATGCAAAAACGT

Product: putative metabolite transport protein YaaU

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 468; Mature: 467

Protein sequence:

>468_residues
MAAETPYPAYRCALPVLKQDITMQQPRNFDDLKFSSIHRRIMLWGSGGPFLDGYVLVIIGVALEQLTPLLHLDAEWIGAL
GAATLAGLFIGTSLFGYICDKVGRRKMFLLDIIAIGVISVATMFVSTPLELLVMRVLIGIVIGADYPIATSMITEFSNTR
QRAFSIGFIAAMWYVGATCANLVGYWLYDMEGGWRWMLGSAFIPCLIILIGRFDLPESPRWLLRKGRVKECEQMMIKLFG
EPVCFDDEPPQETRFLQLFNRRHFPFVLFVAAIWTCQVIPMFAIYTFGPQIVGLLGWEQGRNAALGNVVISLFFMLGCIP
AMFWLNSIGRRPLLIGSFAMMTIALALLGLVSNLGIILVVVAFAVYAFFSGGPGILQWLYPNELFPTDIRASAVGVIMSL
SRIGTIVSTWALPIFITRYGINNVMLIGALISLVGLGVSVMFAPETRGLTLTQTGNMTLRGTPSDNPR

Sequences:

>Translated_468_residues
MAAETPYPAYRCALPVLKQDITMQQPRNFDDLKFSSIHRRIMLWGSGGPFLDGYVLVIIGVALEQLTPLLHLDAEWIGAL
GAATLAGLFIGTSLFGYICDKVGRRKMFLLDIIAIGVISVATMFVSTPLELLVMRVLIGIVIGADYPIATSMITEFSNTR
QRAFSIGFIAAMWYVGATCANLVGYWLYDMEGGWRWMLGSAFIPCLIILIGRFDLPESPRWLLRKGRVKECEQMMIKLFG
EPVCFDDEPPQETRFLQLFNRRHFPFVLFVAAIWTCQVIPMFAIYTFGPQIVGLLGWEQGRNAALGNVVISLFFMLGCIP
AMFWLNSIGRRPLLIGSFAMMTIALALLGLVSNLGIILVVVAFAVYAFFSGGPGILQWLYPNELFPTDIRASAVGVIMSL
SRIGTIVSTWALPIFITRYGINNVMLIGALISLVGLGVSVMFAPETRGLTLTQTGNMTLRGTPSDNPR
>Mature_467_residues
AAETPYPAYRCALPVLKQDITMQQPRNFDDLKFSSIHRRIMLWGSGGPFLDGYVLVIIGVALEQLTPLLHLDAEWIGALG
AATLAGLFIGTSLFGYICDKVGRRKMFLLDIIAIGVISVATMFVSTPLELLVMRVLIGIVIGADYPIATSMITEFSNTRQ
RAFSIGFIAAMWYVGATCANLVGYWLYDMEGGWRWMLGSAFIPCLIILIGRFDLPESPRWLLRKGRVKECEQMMIKLFGE
PVCFDDEPPQETRFLQLFNRRHFPFVLFVAAIWTCQVIPMFAIYTFGPQIVGLLGWEQGRNAALGNVVISLFFMLGCIPA
MFWLNSIGRRPLLIGSFAMMTIALALLGLVSNLGIILVVVAFAVYAFFSGGPGILQWLYPNELFPTDIRASAVGVIMSLS
RIGTIVSTWALPIFITRYGINNVMLIGALISLVGLGVSVMFAPETRGLTLTQTGNMTLRGTPSDNPR

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]

Homologues:

Organism=Homo sapiens, GI24497497, Length=333, Percent_Identity=24.9249249249249, Blast_Score=89, Evalue=6e-18,
Organism=Homo sapiens, GI90669191, Length=333, Percent_Identity=24.9249249249249, Blast_Score=89, Evalue=6e-18,
Organism=Homo sapiens, GI166064021, Length=386, Percent_Identity=25.1295336787565, Blast_Score=82, Evalue=8e-16,
Organism=Homo sapiens, GI31542327, Length=437, Percent_Identity=23.5697940503432, Blast_Score=80, Evalue=4e-15,
Organism=Homo sapiens, GI203098995, Length=359, Percent_Identity=25.3481894150418, Blast_Score=77, Evalue=4e-14,
Organism=Homo sapiens, GI302148518, Length=428, Percent_Identity=24.2990654205607, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI4506999, Length=439, Percent_Identity=23.9179954441913, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI24497490, Length=390, Percent_Identity=24.1025641025641, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI4507005, Length=394, Percent_Identity=24.3654822335025, Blast_Score=73, Evalue=5e-13,
Organism=Homo sapiens, GI21553331, Length=322, Percent_Identity=22.360248447205, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI166795299, Length=339, Percent_Identity=25.6637168141593, Blast_Score=70, Evalue=3e-12,
Organism=Homo sapiens, GI23510410, Length=211, Percent_Identity=25.5924170616114, Blast_Score=68, Evalue=2e-11,
Organism=Homo sapiens, GI7662270, Length=192, Percent_Identity=23.9583333333333, Blast_Score=66, Evalue=6e-11,
Organism=Escherichia coli, GI1786229, Length=439, Percent_Identity=86.3325740318907, Blast_Score=764, Evalue=0.0,
Organism=Escherichia coli, GI87082159, Length=439, Percent_Identity=34.8519362186788, Blast_Score=229, Evalue=3e-61,
Organism=Escherichia coli, GI1789312, Length=406, Percent_Identity=23.8916256157635, Blast_Score=88, Evalue=1e-18,
Organism=Escherichia coli, GI1789207, Length=415, Percent_Identity=22.4096385542169, Blast_Score=87, Evalue=3e-18,
Organism=Escherichia coli, GI1788074, Length=422, Percent_Identity=24.4075829383886, Blast_Score=86, Evalue=5e-18,
Organism=Escherichia coli, GI1790463, Length=476, Percent_Identity=21.8487394957983, Blast_Score=81, Evalue=2e-16,
Organism=Escherichia coli, GI1788068, Length=472, Percent_Identity=23.5169491525424, Blast_Score=67, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17565978, Length=332, Percent_Identity=24.6987951807229, Blast_Score=76, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI17565976, Length=332, Percent_Identity=23.7951807228916, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI71980582, Length=371, Percent_Identity=23.989218328841, Blast_Score=71, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI71980584, Length=371, Percent_Identity=23.989218328841, Blast_Score=71, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI32564663, Length=393, Percent_Identity=22.64631043257, Blast_Score=70, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI193202825, Length=163, Percent_Identity=28.8343558282209, Blast_Score=66, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI71986689, Length=163, Percent_Identity=28.8343558282209, Blast_Score=66, Evalue=3e-11,
Organism=Saccharomyces cerevisiae, GI6323512, Length=454, Percent_Identity=22.9074889867841, Blast_Score=98, Evalue=2e-21,
Organism=Drosophila melanogaster, GI24644782, Length=364, Percent_Identity=26.3736263736264, Blast_Score=79, Evalue=5e-15,
Organism=Drosophila melanogaster, GI28573193, Length=364, Percent_Identity=26.3736263736264, Blast_Score=79, Evalue=6e-15,
Organism=Drosophila melanogaster, GI19922616, Length=418, Percent_Identity=23.6842105263158, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24640198, Length=452, Percent_Identity=23.4513274336283, Blast_Score=73, Evalue=4e-13,
Organism=Drosophila melanogaster, GI24640196, Length=452, Percent_Identity=23.4513274336283, Blast_Score=73, Evalue=4e-13,
Organism=Drosophila melanogaster, GI24640200, Length=452, Percent_Identity=23.4513274336283, Blast_Score=73, Evalue=4e-13,
Organism=Drosophila melanogaster, GI24652795, Length=409, Percent_Identity=23.960880195599, Blast_Score=68, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24652793, Length=409, Percent_Identity=23.960880195599, Blast_Score=68, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24668440, Length=402, Percent_Identity=23.6318407960199, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI221330907, Length=342, Percent_Identity=25.1461988304094, Blast_Score=67, Evalue=3e-11,
Organism=Drosophila melanogaster, GI24653937, Length=452, Percent_Identity=25.2212389380531, Blast_Score=67, Evalue=3e-11,
Organism=Drosophila melanogaster, GI161078612, Length=411, Percent_Identity=22.3844282238443, Blast_Score=66, Evalue=6e-11,
Organism=Drosophila melanogaster, GI24649618, Length=344, Percent_Identity=22.093023255814, Blast_Score=66, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR016196
- InterPro:   IPR005828 [H]

Pfam domain/function: PF00083 Sugar_tr [H]

EC number: NA

Molecular weight: Translated: 51713; Mature: 51582

Theoretical pI: Translated: 8.37; Mature: 8.37

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAETPYPAYRCALPVLKQDITMQQPRNFDDLKFSSIHRRIMLWGSGGPFLDGYVLVIIG
CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCEEEEEECCCCCHHHHHHHHHH
VALEQLTPLLHLDAEWIGALGAATLAGLFIGTSLFGYICDKVGRRKMFLLDIIAIGVISV
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
ATMFVSTPLELLVMRVLIGIVIGADYPIATSMITEFSNTRQRAFSIGFIAAMWYVGATCA
HHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NLVGYWLYDMEGGWRWMLGSAFIPCLIILIGRFDLPESPRWLLRKGRVKECEQMMIKLFG
HHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCHHHHHHHHHHHHC
EPVCFDDEPPQETRFLQLFNRRHFPFVLFVAAIWTCQVIPMFAIYTFGPQIVGLLGWEQG
CCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCC
RNAALGNVVISLFFMLGCIPAMFWLNSIGRRPLLIGSFAMMTIALALLGLVSNLGIILVV
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHH
VAFAVYAFFSGGPGILQWLYPNELFPTDIRASAVGVIMSLSRIGTIVSTWALPIFITRYG
HHHHHHHHHCCCCHHEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
INNVMLIGALISLVGLGVSVMFAPETRGLTLTQTGNMTLRGTPSDNPR
CCHHHHHHHHHHHHHCCEEEEECCCCCCEEEEECCCEEEECCCCCCCC
>Mature Secondary Structure 
AAETPYPAYRCALPVLKQDITMQQPRNFDDLKFSSIHRRIMLWGSGGPFLDGYVLVIIG
CCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCEEEEEECCCCCHHHHHHHHHH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CCHHHHHHHHHHHHHCCEEEEECCCCCCEEEEECCCEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1630901; 9278503 [H]