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The map label for this gene is ycaM [H]

Identifier: 194735476

GI number: 194735476

Start: 1059485

End: 1060906

Strand: Direct

Name: ycaM [H]

Synonym: SeSA_A1082

Alternate gene names: 194735476

Gene position: 1059485-1060906 (Clockwise)

Preceding gene: 194736955

Following gene: 194734865

Centisome position: 22.5

GC content: 47.19

Gene sequence:

>1422_bases
ATGCCGAATGTGCAGGAAAAACAGTTGCGATGGTACAACATCGCCCTGATGTCGTTTATTACCGTTTGGGGATTCGGCAA
TGTTGTCAATAATTATGCTAACCAGGGGTTAGTGGTTGTCTTCTCCTGGGTGTTTATTTTTGCGCTCTATTTTATTCCTT
ATGCCTTAATCGTGGGGCAACTGGGCTCAACCTTCAAAGAGGGAAAAGGGGGCGTCAGTACCTGGATTAAGCATACGATG
GGGCCGGGGTTGGCTTACCTTGCGGCATGGACTTATTGGGTCGTGCATATTCCCTACCTGGCGCAAAAGCCGCAGGCGAT
ACTCATTGCATTGGGATGGGCTTTAAAAGGCGACGGCTCGTTGATAAAAGAATATACCGTCGTTGCCTTGCAGGGGCTGA
CGCTGGCATTGTTTGTTTTCTTTATGTGGGTTGCTTCCAGGGGGATGAAATCGCTAAAGGTTGTTGGGTCTGTGGCCGGG
ATTGCCATGTTTATCATGTCAATTTTATATGTTGTGATGGCAGTGACCGCGCCAGCAATTACAAACGTTGAAATTGCGAC
CACTAACATCACCTGGCAGTCATTTATTCCTCATATCGATTTTACCTATATCACCACCATCTCTATGTTGGTTTTTGCGG
TTGGTGGGGCAGAGAAGATCTCGCCTTACGTTAACCAGACGCGGAATCCAGGAAAAGAATTTCCGAAGGGGATGCTCTTT
TTAGCCGTCATGGTTGCGGTCTGCGCTATCCTCGGTTCGTTGGCGATGGGAATGATGTTTGATTCCCGGCATATACCTGA
CGATTTAATGACCAATGGGCAATATTATGCATTCCAGAAATTGGGTGAGTATTACCATATGGGTAATTCATTAATGGTGA
TTTATGCCATTGCCAATACTCTGGGGCAAATCGCCGCGCTGGTGTTTTCTATTGATGCGCCACTAAAAGTATTGCTGGGT
GATGCAGACAGTAAATATATCCCGCAGCGCTTATGTCGTACTAACGCTTCAGGTACGCCAGTTAACGGTTATTTGCTGAC
ATTGGTGTTGGTCGCTATCTTGATTATGTTGCCAACGCTTGGCATCGGCGATATGAACAACCTGTACAAATGGCTGCTTA
ATCTCAACTCAGTTGTTATGCCGCTGCGCTATCTGTGGGTATTTGTCGCCTTTATTGCTGTCATTCGACTGGCGCAAAAG
TACAAACCCGAATATGTGTTTATTCGCAACCGGGCGTTGGCGTTAACTGTGGGAATATGGTGTTTTGCCTTCACCGCGTT
TGCCTGCCTTACCGGTATTTTCCCCAAAATGGAGGCGTTCACACCGGAGTGGACATTCCAGCTGACGTTGAACATCGTGA
CGCCTTTTGTCCTGGTCGGGTTGGGATTAATTTTCCCACTGCTGGCGCGTAGAAACACATAA

Upstream 100 bases:

>100_bases
TTATAATTTTGCGCTCCTCTATTTTCTCTCTTCGTCTTTACCGCGCATAATTCCCCGCTTCATTTATAGTAATAGCATTG
TGTTCACGAAGGATCACGTT

Downstream 100 bases:

>100_bases
CGACGCTCTTTTCCACGGCGCTCCTGTCAGGCGAGCGCCTTTTAAGGTCACAGGTGCCTGGGTTCCAGGCGGAGACCATG
GTATTAACAGGCACCGGGTC

Product: inner membrane transporter YcaM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 473; Mature: 472

Protein sequence:

>473_residues
MPNVQEKQLRWYNIALMSFITVWGFGNVVNNYANQGLVVVFSWVFIFALYFIPYALIVGQLGSTFKEGKGGVSTWIKHTM
GPGLAYLAAWTYWVVHIPYLAQKPQAILIALGWALKGDGSLIKEYTVVALQGLTLALFVFFMWVASRGMKSLKVVGSVAG
IAMFIMSILYVVMAVTAPAITNVEIATTNITWQSFIPHIDFTYITTISMLVFAVGGAEKISPYVNQTRNPGKEFPKGMLF
LAVMVAVCAILGSLAMGMMFDSRHIPDDLMTNGQYYAFQKLGEYYHMGNSLMVIYAIANTLGQIAALVFSIDAPLKVLLG
DADSKYIPQRLCRTNASGTPVNGYLLTLVLVAILIMLPTLGIGDMNNLYKWLLNLNSVVMPLRYLWVFVAFIAVIRLAQK
YKPEYVFIRNRALALTVGIWCFAFTAFACLTGIFPKMEAFTPEWTFQLTLNIVTPFVLVGLGLIFPLLARRNT

Sequences:

>Translated_473_residues
MPNVQEKQLRWYNIALMSFITVWGFGNVVNNYANQGLVVVFSWVFIFALYFIPYALIVGQLGSTFKEGKGGVSTWIKHTM
GPGLAYLAAWTYWVVHIPYLAQKPQAILIALGWALKGDGSLIKEYTVVALQGLTLALFVFFMWVASRGMKSLKVVGSVAG
IAMFIMSILYVVMAVTAPAITNVEIATTNITWQSFIPHIDFTYITTISMLVFAVGGAEKISPYVNQTRNPGKEFPKGMLF
LAVMVAVCAILGSLAMGMMFDSRHIPDDLMTNGQYYAFQKLGEYYHMGNSLMVIYAIANTLGQIAALVFSIDAPLKVLLG
DADSKYIPQRLCRTNASGTPVNGYLLTLVLVAILIMLPTLGIGDMNNLYKWLLNLNSVVMPLRYLWVFVAFIAVIRLAQK
YKPEYVFIRNRALALTVGIWCFAFTAFACLTGIFPKMEAFTPEWTFQLTLNIVTPFVLVGLGLIFPLLARRNT
>Mature_472_residues
PNVQEKQLRWYNIALMSFITVWGFGNVVNNYANQGLVVVFSWVFIFALYFIPYALIVGQLGSTFKEGKGGVSTWIKHTMG
PGLAYLAAWTYWVVHIPYLAQKPQAILIALGWALKGDGSLIKEYTVVALQGLTLALFVFFMWVASRGMKSLKVVGSVAGI
AMFIMSILYVVMAVTAPAITNVEIATTNITWQSFIPHIDFTYITTISMLVFAVGGAEKISPYVNQTRNPGKEFPKGMLFL
AVMVAVCAILGSLAMGMMFDSRHIPDDLMTNGQYYAFQKLGEYYHMGNSLMVIYAIANTLGQIAALVFSIDAPLKVLLGD
ADSKYIPQRLCRTNASGTPVNGYLLTLVLVAILIMLPTLGIGDMNNLYKWLLNLNSVVMPLRYLWVFVAFIAVIRLAQKY
KPEYVFIRNRALALTVGIWCFAFTAFACLTGIFPKMEAFTPEWTFQLTLNIVTPFVLVGLGLIFPLLARRNT

Specific function: Unknown

COG id: COG0531

COG function: function code E; Amino acid transporters

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]

Homologues:

Organism=Escherichia coli, GI87081798, Length=469, Percent_Identity=93.3901918976546, Blast_Score=900, Evalue=0.0,
Organism=Escherichia coli, GI48994921, Length=438, Percent_Identity=23.0593607305936, Blast_Score=122, Evalue=5e-29,
Organism=Escherichia coli, GI87082380, Length=464, Percent_Identity=22.4137931034483, Blast_Score=114, Evalue=1e-26,
Organism=Escherichia coli, GI1787768, Length=428, Percent_Identity=22.196261682243, Blast_Score=69, Evalue=6e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004841
- InterPro:   IPR002293 [H]

Pfam domain/function: PF00324 AA_permease [H]

EC number: NA

Molecular weight: Translated: 52557; Mature: 52426

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPNVQEKQLRWYNIALMSFITVWGFGNVVNNYANQGLVVVFSWVFIFALYFIPYALIVGQ
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
LGSTFKEGKGGVSTWIKHTMGPGLAYLAAWTYWVVHIPYLAQKPQAILIALGWALKGDGS
HCCHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHCCCCEEEEEEECEECCCCH
LIKEYTVVALQGLTLALFVFFMWVASRGMKSLKVVGSVAGIAMFIMSILYVVMAVTAPAI
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
TNVEIATTNITWQSFIPHIDFTYITTISMLVFAVGGAEKISPYVNQTRNPGKEFPKGMLF
CCEEEEEECCCHHHHCCCCCHHHHHHHHHHHHHCCCHHHHCHHHHCCCCCHHHHHHHHHH
LAVMVAVCAILGSLAMGMMFDSRHIPDDLMTNGQYYAFQKLGEYYHMGNSLMVIYAIANT
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHH
LGQIAALVFSIDAPLKVLLGDADSKYIPQRLCRTNASGTPVNGYLLTLVLVAILIMLPTL
HHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCC
GIGDMNNLYKWLLNLNSVVMPLRYLWVFVAFIAVIRLAQKYKPEYVFIRNRALALTVGIW
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH
CFAFTAFACLTGIFPKMEAFTPEWTFQLTLNIVTPFVLVGLGLIFPLLARRNT
HHHHHHHHHHHHCCHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
PNVQEKQLRWYNIALMSFITVWGFGNVVNNYANQGLVVVFSWVFIFALYFIPYALIVGQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
LGSTFKEGKGGVSTWIKHTMGPGLAYLAAWTYWVVHIPYLAQKPQAILIALGWALKGDGS
HCCHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHCCCCEEEEEEECEECCCCH
LIKEYTVVALQGLTLALFVFFMWVASRGMKSLKVVGSVAGIAMFIMSILYVVMAVTAPAI
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
TNVEIATTNITWQSFIPHIDFTYITTISMLVFAVGGAEKISPYVNQTRNPGKEFPKGMLF
CCEEEEEECCCHHHHCCCCCHHHHHHHHHHHHHCCCHHHHCHHHHCCCCCHHHHHHHHHH
LAVMVAVCAILGSLAMGMMFDSRHIPDDLMTNGQYYAFQKLGEYYHMGNSLMVIYAIANT
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHH
LGQIAALVFSIDAPLKVLLGDADSKYIPQRLCRTNASGTPVNGYLLTLVLVAILIMLPTL
HHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCC
GIGDMNNLYKWLLNLNSVVMPLRYLWVFVAFIAVIRLAQKYKPEYVFIRNRALALTVGIW
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH
CFAFTAFACLTGIFPKMEAFTPEWTFQLTLNIVTPFVLVGLGLIFPLLARRNT
HHHHHHHHHHHHCCHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]