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The map label for this gene is rfaY [H]

Identifier: 194735458

GI number: 194735458

Start: 3787120

End: 3787818

Strand: Reverse

Name: rfaY [H]

Synonym: SeSA_A3915

Alternate gene names: 194735458

Gene position: 3787818-3787120 (Counterclockwise)

Preceding gene: 194734939

Following gene: 194736931

Centisome position: 80.44

GC content: 33.33

Gene sequence:

>699_bases
ATGATTATTGAAAAAAAGGTTAAAAACTATACCGTCTTTGTCAAAAAAGACGGTGAAAAATACATTGAGATATTCAAAGA
TTTTCTATCTTATAATCATCAGATTATTAAAGTCTTCCGTAATATAGAAGATACAAAAGTTGTATTGATTAATACAGACT
ACGGAAAATATATTCTCAAAGTATTTAGTCCAAAAGTAAAAAATACTGAACGATTTTTCAAATCGTTAGTAAAAGGAGAT
TACTACGAAAAGCTTTTTCATCAGACAGATCGTGTGCGGCGTGAAGGGTTTGCGACGCTTAATGATTTTTACCTGCTGGC
GGAAATTAAAACATTACGCTATGTAAAAACATACGTGATGATAATTGAGTATATTGAAGGTATTGAACTTGTTGATATGC
CAGAAATTTCTGACGAGGTGAGAGGGAAAATCAAACAGTCGATATATTCCCTGCATCAGCATGGTATGGTTTCGGGCGAT
CCCCATAAAGGTAACTTTATCCTGCAAGGAAATGAGATCAGAATTATCGATTTGTCCGGAAAAAGACCTTCCAGGCAACG
AAAAGCAAAGGATCGTATTGATTTAGAAAGACATTATGGTATCAAAAATAATGTGAGAGATATCGGATTTTACTTATTGA
TTTATAAGAAAAAACTTCGAAATTTCCTTCGTCGTATTAAGGGTAAGGAAAAGCGCTGA

Upstream 100 bases:

>100_bases
CTTCTCGTGCAAGGTCATTACTTTAAAGGCCTTCTGGCTGGAAGCGCATATCTTTATCGTAAAATTTTCCACAAATAATT
TCCTTCCCTAAATCTCCATT

Downstream 100 bases:

>100_bases
CCAATGTAGCACGTTTGGTTTAATTTAAGGGGCTGACTGACTTTTATTTGCTGCAGCGTTATGACATACTTGAGAGAATT
TGAGATGTAATATTAGTTAT

Product: lipopolysaccharide core biosynthesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 232; Mature: 232

Protein sequence:

>232_residues
MIIEKKVKNYTVFVKKDGEKYIEIFKDFLSYNHQIIKVFRNIEDTKVVLINTDYGKYILKVFSPKVKNTERFFKSLVKGD
YYEKLFHQTDRVRREGFATLNDFYLLAEIKTLRYVKTYVMIIEYIEGIELVDMPEISDEVRGKIKQSIYSLHQHGMVSGD
PHKGNFILQGNEIRIIDLSGKRPSRQRKAKDRIDLERHYGIKNNVRDIGFYLLIYKKKLRNFLRRIKGKEKR

Sequences:

>Translated_232_residues
MIIEKKVKNYTVFVKKDGEKYIEIFKDFLSYNHQIIKVFRNIEDTKVVLINTDYGKYILKVFSPKVKNTERFFKSLVKGD
YYEKLFHQTDRVRREGFATLNDFYLLAEIKTLRYVKTYVMIIEYIEGIELVDMPEISDEVRGKIKQSIYSLHQHGMVSGD
PHKGNFILQGNEIRIIDLSGKRPSRQRKAKDRIDLERHYGIKNNVRDIGFYLLIYKKKLRNFLRRIKGKEKR
>Mature_232_residues
MIIEKKVKNYTVFVKKDGEKYIEIFKDFLSYNHQIIKVFRNIEDTKVVLINTDYGKYILKVFSPKVKNTERFFKSLVKGD
YYEKLFHQTDRVRREGFATLNDFYLLAEIKTLRYVKTYVMIIEYIEGIELVDMPEISDEVRGKIKQSIYSLHQHGMVSGD
PHKGNFILQGNEIRIIDLSGKRPSRQRKAKDRIDLERHYGIKNNVRDIGFYLLIYKKKLRNFLRRIKGKEKR

Specific function: Catalyzes the phosphorylation of heptose(II) of the outer membrane lipopolysaccharide core [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the protein kinase superfamily. RfaY/waaY family [H]

Homologues:

Organism=Escherichia coli, GI1790055, Length=232, Percent_Identity=70.2586206896552, Blast_Score=342, Evalue=1e-95,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011009
- InterPro:   IPR009330 [H]

Pfam domain/function: PF06176 WaaY [H]

EC number: 2.7.-.-

Molecular weight: Translated: 27771; Mature: 27771

Theoretical pI: Translated: 10.36; Mature: 10.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIEKKVKNYTVFVKKDGEKYIEIFKDFLSYNHQIIKVFRNIEDTKVVLINTDYGKYILK
CCCCCCCCCEEEEEEECCHHHHHHHHHHHHHCHHHHHHHHCCCCCEEEEEECCHHHHHHH
VFSPKVKNTERFFKSLVKGDYYEKLFHQTDRVRREGFATLNDFYLLAEIKTLRYVKTYVM
HHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
IIEYIEGIELVDMPEISDEVRGKIKQSIYSLHQHGMVSGDPHKGNFILQGNEIRIIDLSG
HHHHHCCCCEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCEEEEEEECC
KRPSRQRKAKDRIDLERHYGIKNNVRDIGFYLLIYKKKLRNFLRRIKGKEKR
CCCCHHHHHHHHCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MIIEKKVKNYTVFVKKDGEKYIEIFKDFLSYNHQIIKVFRNIEDTKVVLINTDYGKYILK
CCCCCCCCCEEEEEEECCHHHHHHHHHHHHHCHHHHHHHHCCCCCEEEEEECCHHHHHHH
VFSPKVKNTERFFKSLVKGDYYEKLFHQTDRVRREGFATLNDFYLLAEIKTLRYVKTYVM
HHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
IIEYIEGIELVDMPEISDEVRGKIKQSIYSLHQHGMVSGDPHKGNFILQGNEIRIIDLSG
HHHHHCCCCEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCEEEEEEECC
KRPSRQRKAKDRIDLERHYGIKNNVRDIGFYLLIYKKKLRNFLRRIKGKEKR
CCCCHHHHHHHHCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9573095; 11677609; 9535865; 1657881 [H]