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The map label for this gene is ybdH [H]

Identifier: 194735278

GI number: 194735278

Start: 737001

End: 738089

Strand: Reverse

Name: ybdH [H]

Synonym: SeSA_A0760

Alternate gene names: 194735278

Gene position: 738089-737001 (Counterclockwise)

Preceding gene: 194737186

Following gene: 194734282

Centisome position: 15.67

GC content: 57.67

Gene sequence:

>1089_bases
ATGAACCACACTGAAATCCGCGTCGTTACCGGCCCGGCGAATTATTTTTCCCATGCTGGAAGCCTCGGAAGACTGACAGA
CTTTTTCACGCCGGAACAGCTTTCCCACGCCGTTTGGGTGTTCGGCGAACGCGCGATTGCCGCCGCCCGGCCTTACCTGC
CGGAAGCGTTTGAACGTGCTGGCGCAAAACATCTGCAGTTTACCGGCCATTGTAGCGAACGCCATGTTGCCCAACTGGCG
CACGCCTGCAACGACGATCGTCAGGTGGTGATAGGCGTCGGCGGCGGCGCGCTGCTCGATACCGCCAAAGCGCTCGCCCG
CCGTCTGGCGCTGCCGTTTGTCGCTATCCCGACCATCGCGGCGACCTGCGCCGCCTGGACACCGCTTTCCGTCTGGTATA
ACGACGCGGGACAGGCGTTACAGTTCGAAATTTTTGATGATGCCAATTTTCTGGTGCTGGTCGAACCGCGCATTATTCTG
CAGGCGCCCGATGACTATCTGTTAGCTGGCATTGGCGATACGCTGGCGAAATGGTATGAAGCCGTTGTGCTTGCGCCGCA
GCCTGAAACGTTGCCTTTGACCGTAAGACTGGGCATTAACAGCGCGTGCGCTATTCGCGATCTCCTGCTGACCAGCAGCG
AACAAGCATTAGCGGATAAACAGCAGCGTCGGCTGACCCAGGCATTTTGCGACGTGGTGGATGCGATTATCGCTGGCGGC
GGTATGGTCGGCGGCCTCGGGGAACGCTATACCCGTGTCGCCGCCGCCCATGCGGTACACAACGGTCTGACCGTCCTGCC
GCAAACGGAAAAATTCCTGCACGGAACGAAAGTGGCTTATGGCATTCTGGTGCAAAGCGCGCTACTGGGACAAGATGACG
TGCTGGCGCAATTGATTGCAGCGTACCGGCGATTTCATCTGCCGGCCCGACTTAGCGAACTGGACGTGGATATTCATAAC
ACCGCCGAGATCGATAGGGTAATCGCACATACCCTGCGCCCGGTCGAATCCATCCACTATTTACCGGTGACGTTAACGCC
TGACACCCTGCGTGCGGCGTTTGAAAAAGTTGAATTTTTCAGAATATAG

Upstream 100 bases:

>100_bases
TTGTTGACACACTATCACAGGGTGTTAGTATTTGGCAATCAAGACGTTTAGATGTCTAAATATAATAACAACGGTGAGAA
GACCCTAAGGACAACACAAC

Downstream 100 bases:

>100_bases
CCTGGTGACGTTGCGCTTATCAGGCCTGGCAACACTCAGCAGCAACGCGCGCCGCCTTTTCCACCATAGCGCGCATCCTG
CCGCTCGCGGAAAAATTCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 362; Mature: 362

Protein sequence:

>362_residues
MNHTEIRVVTGPANYFSHAGSLGRLTDFFTPEQLSHAVWVFGERAIAAARPYLPEAFERAGAKHLQFTGHCSERHVAQLA
HACNDDRQVVIGVGGGALLDTAKALARRLALPFVAIPTIAATCAAWTPLSVWYNDAGQALQFEIFDDANFLVLVEPRIIL
QAPDDYLLAGIGDTLAKWYEAVVLAPQPETLPLTVRLGINSACAIRDLLLTSSEQALADKQQRRLTQAFCDVVDAIIAGG
GMVGGLGERYTRVAAAHAVHNGLTVLPQTEKFLHGTKVAYGILVQSALLGQDDVLAQLIAAYRRFHLPARLSELDVDIHN
TAEIDRVIAHTLRPVESIHYLPVTLTPDTLRAAFEKVEFFRI

Sequences:

>Translated_362_residues
MNHTEIRVVTGPANYFSHAGSLGRLTDFFTPEQLSHAVWVFGERAIAAARPYLPEAFERAGAKHLQFTGHCSERHVAQLA
HACNDDRQVVIGVGGGALLDTAKALARRLALPFVAIPTIAATCAAWTPLSVWYNDAGQALQFEIFDDANFLVLVEPRIIL
QAPDDYLLAGIGDTLAKWYEAVVLAPQPETLPLTVRLGINSACAIRDLLLTSSEQALADKQQRRLTQAFCDVVDAIIAGG
GMVGGLGERYTRVAAAHAVHNGLTVLPQTEKFLHGTKVAYGILVQSALLGQDDVLAQLIAAYRRFHLPARLSELDVDIHN
TAEIDRVIAHTLRPVESIHYLPVTLTPDTLRAAFEKVEFFRI
>Mature_362_residues
MNHTEIRVVTGPANYFSHAGSLGRLTDFFTPEQLSHAVWVFGERAIAAARPYLPEAFERAGAKHLQFTGHCSERHVAQLA
HACNDDRQVVIGVGGGALLDTAKALARRLALPFVAIPTIAATCAAWTPLSVWYNDAGQALQFEIFDDANFLVLVEPRIIL
QAPDDYLLAGIGDTLAKWYEAVVLAPQPETLPLTVRLGINSACAIRDLLLTSSEQALADKQQRRLTQAFCDVVDAIIAGG
GMVGGLGERYTRVAAAHAVHNGLTVLPQTEKFLHGTKVAYGILVQSALLGQDDVLAQLIAAYRRFHLPARLSELDVDIHN
TAEIDRVIAHTLRPVESIHYLPVTLTPDTLRAAFEKVEFFRI

Specific function: Unknown

COG id: COG0371

COG function: function code C; Glycerol dehydrogenase and related enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the iron-containing alcohol dehydrogenase family [H]

Homologues:

Organism=Escherichia coli, GI1786815, Length=361, Percent_Identity=81.7174515235457, Blast_Score=577, Evalue=1e-166,
Organism=Escherichia coli, GI87082352, Length=357, Percent_Identity=31.9327731092437, Blast_Score=152, Evalue=3e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001670
- InterPro:   IPR018211
- InterPro:   IPR016205 [H]

Pfam domain/function: PF00465 Fe-ADH [H]

EC number: 1.1.-.- [C]

Molecular weight: Translated: 39480; Mature: 39480

Theoretical pI: Translated: 6.39; Mature: 6.39

Prosite motif: PS00913 ADH_IRON_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNHTEIRVVTGPANYFSHAGSLGRLTDFFTPEQLSHAVWVFGERAIAAARPYLPEAFERA
CCCCEEEEEECCHHHHHCCCCCCHHHHCCCHHHHCCEEEEECCHHHHHCCCCCHHHHHHC
GAKHLQFTGHCSERHVAQLAHACNDDRQVVIGVGGGALLDTAKALARRLALPFVAIPTIA
CCCEEEEECCCCHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHCCHHHHHHHH
ATCAAWTPLSVWYNDAGQALQFEIFDDANFLVLVEPRIILQAPDDYLLAGIGDTLAKWYE
HHHHCCCCCEEEECCCCCEEEEEEECCCCEEEEECCEEEEECCCCCEEECCHHHHHHHHH
AVVLAPQPETLPLTVRLGINSACAIRDLLLTSSEQALADKQQRRLTQAFCDVVDAIIAGG
EEEECCCCCCEEEEEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
GMVGGLGERYTRVAAAHAVHNGLTVLPQTEKFLHGTKVAYGILVQSALLGQDDVLAQLIA
CCCCCHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
AYRRFHLPARLSELDVDIHNTAEIDRVIAHTLRPVESIHYLPVTLTPDTLRAAFEKVEFF
HHHHHCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHCEEEEEEECHHHHHHHHHHHHHH
RI
CC
>Mature Secondary Structure
MNHTEIRVVTGPANYFSHAGSLGRLTDFFTPEQLSHAVWVFGERAIAAARPYLPEAFERA
CCCCEEEEEECCHHHHHCCCCCCHHHHCCCHHHHCCEEEEECCHHHHHCCCCCHHHHHHC
GAKHLQFTGHCSERHVAQLAHACNDDRQVVIGVGGGALLDTAKALARRLALPFVAIPTIA
CCCEEEEECCCCHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHCCHHHHHHHH
ATCAAWTPLSVWYNDAGQALQFEIFDDANFLVLVEPRIILQAPDDYLLAGIGDTLAKWYE
HHHHCCCCCEEEECCCCCEEEEEEECCCCEEEEECCEEEEECCCCCEEECCHHHHHHHHH
AVVLAPQPETLPLTVRLGINSACAIRDLLLTSSEQALADKQQRRLTQAFCDVVDAIIAGG
EEEECCCCCCEEEEEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
GMVGGLGERYTRVAAAHAVHNGLTVLPQTEKFLHGTKVAYGILVQSALLGQDDVLAQLIA
CCCCCHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
AYRRFHLPARLSELDVDIHNTAEIDRVIAHTLRPVESIHYLPVTLTPDTLRAAFEKVEFF
HHHHHCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHCEEEEEEECHHHHHHHHHHHHHH
RI
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 1848300; 7567469 [H]