| Definition | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 chromosome, complete genome. |
|---|---|
| Accession | NC_011094 |
| Length | 4,709,075 |
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The map label for this gene is yqiJ [H]
Identifier: 194735212
GI number: 194735212
Start: 3267330
End: 3267950
Strand: Direct
Name: yqiJ [H]
Synonym: SeSA_A3387
Alternate gene names: 194735212
Gene position: 3267330-3267950 (Clockwise)
Preceding gene: 194734357
Following gene: 194735417
Centisome position: 69.38
GC content: 52.17
Gene sequence:
>621_bases ATGACCTTATTTGCGGAGTATAACAGCCCCTATCTGTTTGCCATCGCGTTCGTTTTCTTTATCGGCGTGCTGGAGATGAT TTCTCTGATTTTTGGCCACTTTCTTTCAGGCACGCTCGACGCCCATCTCGATCATTATGACGCCCTGTCATCTGGCCCTG CGGGCCAGGCGCTTCATTATCTGAATATTGGACGCGTTCCCGCCCTGGTCGTCCTCTGTCTATTGGCCGGTTATTTCGGC CTCTTCGGTATCCTCATCCAGCATGGCGGGATCATGCTCTGGCAAGCGCCGCTCAGCAATCTGCTGCTGGTCCCGTTGAG CATTGTCCTGTCGGTCTTTGCCGTGCATTACAGCGGAAAAATCCTCGCGCCCTGGCTACCCAGAGATGAAAGCTCCGCCC TCAGGGAAGAGGAATTTATCGGCGGCATGGCGATTATTACCGGCCACGCCGCCGTCGCCGGTACACCTTGCGAAGGAAAA TTTACCGATAAGTTCGGCCAGATTCACTATTTACTGCTGGAACCCGAAAAGGGAAAAGAATTTAAAAAAGGAGACAAGGT GCTGATTGTCTACCAACTTTCCGCAACGCGTTATTTGGCTGAGCGTACCTTCTATGTCTAA
Upstream 100 bases:
>100_bases AAGGAGATATGGGTCACATGATATTGTAACGCAATGAAATAACAAGCATGAAAATTATCACGCGAACACCCTTCTGAAGG CGGCAACAAGGATAGAAAAT
Downstream 100 bases:
>100_bases TTGAGAGGAACTTACATAATGGATGATGTTTTTGGCATATTGCCATCATGGATGTTTACCGCCATCGTTGCGGTTATCGT CTTACTAATTATCGGGATCA
Product: inner membrane protein YqiJ
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 206; Mature: 205
Protein sequence:
>206_residues MTLFAEYNSPYLFAIAFVFFIGVLEMISLIFGHFLSGTLDAHLDHYDALSSGPAGQALHYLNIGRVPALVVLCLLAGYFG LFGILIQHGGIMLWQAPLSNLLLVPLSIVLSVFAVHYSGKILAPWLPRDESSALREEEFIGGMAIITGHAAVAGTPCEGK FTDKFGQIHYLLLEPEKGKEFKKGDKVLIVYQLSATRYLAERTFYV
Sequences:
>Translated_206_residues MTLFAEYNSPYLFAIAFVFFIGVLEMISLIFGHFLSGTLDAHLDHYDALSSGPAGQALHYLNIGRVPALVVLCLLAGYFG LFGILIQHGGIMLWQAPLSNLLLVPLSIVLSVFAVHYSGKILAPWLPRDESSALREEEFIGGMAIITGHAAVAGTPCEGK FTDKFGQIHYLLLEPEKGKEFKKGDKVLIVYQLSATRYLAERTFYV >Mature_205_residues TLFAEYNSPYLFAIAFVFFIGVLEMISLIFGHFLSGTLDAHLDHYDALSSGPAGQALHYLNIGRVPALVVLCLLAGYFGL FGILIQHGGIMLWQAPLSNLLLVPLSIVLSVFAVHYSGKILAPWLPRDESSALREEEFIGGMAIITGHAAVAGTPCEGKF TDKFGQIHYLLLEPEKGKEFKKGDKVLIVYQLSATRYLAERTFYV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789429, Length=203, Percent_Identity=70.4433497536946, Blast_Score=313, Evalue=8e-87,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010840 [H]
Pfam domain/function: PF07290 DUF1449 [H]
EC number: NA
Molecular weight: Translated: 22684; Mature: 22553
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLFAEYNSPYLFAIAFVFFIGVLEMISLIFGHFLSGTLDAHLDHYDALSSGPAGQALHY CEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCEEEE LNIGRVPALVVLCLLAGYFGLFGILIQHGGIMLWQAPLSNLLLVPLSIVLSVFAVHYSGK CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCE ILAPWLPRDESSALREEEFIGGMAIITGHAAVAGTPCEGKFTDKFGQIHYLLLEPEKGKE EEECCCCCCCHHHHHHHHHHCCEEEEECCCCEECCCCCCCCCCCCCCEEEEEEECCCCCC FKKGDKVLIVYQLSATRYLAERTFYV CCCCCCEEEEEEECHHHHHHHHHCCC >Mature Secondary Structure TLFAEYNSPYLFAIAFVFFIGVLEMISLIFGHFLSGTLDAHLDHYDALSSGPAGQALHY EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCEEEE LNIGRVPALVVLCLLAGYFGLFGILIQHGGIMLWQAPLSNLLLVPLSIVLSVFAVHYSGK CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCE ILAPWLPRDESSALREEEFIGGMAIITGHAAVAGTPCEGKFTDKFGQIHYLLLEPEKGKE EEECCCCCCCHHHHHHHHHHCCEEEEECCCCEECCCCCCCCCCCCCCEEEEEEECCCCCC FKKGDKVLIVYQLSATRYLAERTFYV CCCCCCEEEEEEECHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]