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The map label for this gene is yhgF [H]

Identifier: 194735081

GI number: 194735081

Start: 3558134

End: 3560464

Strand: Direct

Name: yhgF [H]

Synonym: SeSA_A3702

Alternate gene names: 194735081

Gene position: 3558134-3560464 (Clockwise)

Preceding gene: 194738363

Following gene: 194736713

Centisome position: 75.56

GC content: 58.73

Gene sequence:

>2331_bases
ATGATGAATGATTCTTTCTGCCGCATTATTGCGGGTGAAATCCAGGCAAATGCCGGGCAGGTTGAAGCTGCCGTTCGCCT
GCTTGACGAAGGGAACACCGTGCCGTTTATCGCACGTTATCGTAAAGAAATCACCGGCGGTCTGGATGACACGCAGTTGC
GTAACCTGGAAACGCGTCTGGGCTATCTGCGTGAGCTGGAAGACAGGCGTCAGGCCATCCTCAAGTCCATTTCCGAACAA
GGCAAACTGACCGATGAGCTGGCTGGCGCCATCAACGCTACGTTAAGTAAGACCGAGCTCGAAGACCTCTACCTGCCCTA
TAAACCTAAACGCCGCACCCGTGGACAAATCGCCATTGAAGCCGGCCTTGAGCCGCTGGCCGATCTGCTCTGGAACGAAC
CGTCCCACGATCCTGACGTGGAAGCGGCAAAGTACATTGATGGCGACAAAGGCGTGGCGGACACGAAAGCCGCGCTCGAC
GGCGCACGCTACATTCTGATGGAGCGCTTTGCCGAAGACGCCGCATTGCTGGCGAAAGTGCGTGATTACCTGTGGAAGAA
CGCCCATCTGGTCGCCACGGTCGTGAGCGGCAAAGAGGAAGAAGGGGCAAAATTCCGCGACTATTTCGACCATCATGAGC
CCATTGCTAACGTCCCGTCTCACCGTGCGCTGGCCATGTTCCGTGGTCGTAACGAAGGCATTCTGCAACTTTCGCTCAAT
GCCGACCCACAGTTTGATGAGCCGCCGAAAGAAAGCTACTGCGAGCAAATCATCATGGACCATCTCGGCCTGCGGCTAAA
TAACGCCCCGGCGGATAGCTGGCGCAAAGGCGTAGTGAGCTGGACGTGGCGTATCAAAGTCTTAATGCACCTCGAAACCG
AACTGATGGGCACCGTGCGCGAACGTGCAGAAGATGAAGCGATTAACGTGTTTGCCCGTAACCTGCACGACCTGCTGATG
GCAGCCCCCGCAGGCCTGCGCGCCACGATGGGCCTTGATCCTGGCCTGCGTACCGGCGTAAAAGTCGCTGTCGTTGACGG
CACCGGCAAGCTGGTGGCGACGGATACCATTTATCCGCATACCGGTCAGGCGGCCAAAGCGGCTACCGTGATCGCCGCGC
TGTGCGAAAAATACCACGTCGAACTGGTCGCGATTGGCAACGGTACGGCCTCGCGTGAAACCGAACGCTTCTATCTCGAC
GTACAGAAACAGTTCCCGAACGTGACGGCGCAGAAAGTGATCGTCAGCGAAGCGGGGGCGTCCGTGTATTCCGCTTCTGA
GCTGGCGGCGCAGGAGTTTCCGGATCTCGACGTCTCCCTGCGCGGCGCGGTCTCTATCGCGCGTCGCCTGCAGGATCCGC
TGGCGGAACTGGTGAAAATCGATCCGAAATCCATCGGCGTCGGCCAATATCAACACGATGTCAGCCAGACCCAGTTGGCG
CGTAAGCTGGATGCGGTGGTCGAAGACTGCGTAAACGCCGTCGGCGTCGATTTGAATACCGCCTCCGTGCCGCTGCTGAC
CCGCGTCGCGGGCTTAACGCGCATGATGGCGCAAAACATCGTCGCCTGGCGCGATGAGAACGGTCAGTTTCAGAACCGCC
AGCAACTGTTGAAGGTGAGCCGTCTGGGGCCGAAAGCGTTTGAGCAGTGCGCGGGCTTCCTGCGTATTAACCACGGCGAT
AACCCGCTGGATGCCTCCACCGTCCACCCGGAAGCCTATCCGGTTGTCGAACGCATTCTGGCGGCGACGCAGCAAGCGCT
AAAAGATCTGATGGGCAACAGCAACGAATTGCGTCACCTCAAGGCCGCTGATTTTACCGACGATAAATTCGGCGTGCCGA
CCGTGAGCGATATCATCAAAGAGCTGGAAAAACCGGGCCGCGACCCACGTCCTGAATTTAAAACCGCGCAATTCGCCGAT
GGCGTCGAAACCATGAACGACCTGCTGCCGGGGATGATTCTGGAAGGGGCGGTCACTAACGTCACTAACTTCGGCGCGTT
TGTCGATATCGGCGTTCATCAGGATGGCCTGGTGCATATCTCCTCGCTCTCGAATAAGTTCGTTGAAGATCCGCACACCG
TGGTGAAAGCGGGCGACATCGTGAAGGTGAAAGTGCTGGAAGTGGATCTGCAACGTAAGCGTATCGCCCTGACCATGCGT
CTGGACGAGCAGCCCGGCGAAACCGCCGCTCGCCGCGGCGGCGGCGCCGATCGCGCTCAGGGCAACCGCCCGGCATCTAA
AGCGGCGAAACCGCGCGGTCGTGACGCCCAGCCAGCCGGTAACAGCGCCATGATGGACGCGCTGGCAGCCGCAATGGGAA
AAAAACGCTAA

Upstream 100 bases:

>100_bases
AAGACAAGAAGAATCCTAAGCCCCCGCTGATGGCTGGCATTTTTGCCAGCCAATCCGTATAACTATCCCCTGATTTTTAT
CCTGAAGACGAAGCTAACCC

Downstream 100 bases:

>100_bases
TCGGGTCATACGCAGGCCGGGTTACTTCTTATCCGGCCTGCGATTTTGCAATACGTCCAACCCTTTCTTTTTTAATTAAC
AATTAAATCTTATCCATTAG

Product: putative transcriptional accessory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 776; Mature: 776

Protein sequence:

>776_residues
MMNDSFCRIIAGEIQANAGQVEAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLGYLRELEDRRQAILKSISEQ
GKLTDELAGAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGLEPLADLLWNEPSHDPDVEAAKYIDGDKGVADTKAALD
GARYILMERFAEDAALLAKVRDYLWKNAHLVATVVSGKEEEGAKFRDYFDHHEPIANVPSHRALAMFRGRNEGILQLSLN
ADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRERAEDEAINVFARNLHDLLM
AAPAGLRATMGLDPGLRTGVKVAVVDGTGKLVATDTIYPHTGQAAKAATVIAALCEKYHVELVAIGNGTASRETERFYLD
VQKQFPNVTAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLA
RKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGD
NPLDASTVHPEAYPVVERILAATQQALKDLMGNSNELRHLKAADFTDDKFGVPTVSDIIKELEKPGRDPRPEFKTAQFAD
GVETMNDLLPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR
LDEQPGETAARRGGGADRAQGNRPASKAAKPRGRDAQPAGNSAMMDALAAAMGKKR

Sequences:

>Translated_776_residues
MMNDSFCRIIAGEIQANAGQVEAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLGYLRELEDRRQAILKSISEQ
GKLTDELAGAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGLEPLADLLWNEPSHDPDVEAAKYIDGDKGVADTKAALD
GARYILMERFAEDAALLAKVRDYLWKNAHLVATVVSGKEEEGAKFRDYFDHHEPIANVPSHRALAMFRGRNEGILQLSLN
ADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRERAEDEAINVFARNLHDLLM
AAPAGLRATMGLDPGLRTGVKVAVVDGTGKLVATDTIYPHTGQAAKAATVIAALCEKYHVELVAIGNGTASRETERFYLD
VQKQFPNVTAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLA
RKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGD
NPLDASTVHPEAYPVVERILAATQQALKDLMGNSNELRHLKAADFTDDKFGVPTVSDIIKELEKPGRDPRPEFKTAQFAD
GVETMNDLLPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR
LDEQPGETAARRGGGADRAQGNRPASKAAKPRGRDAQPAGNSAMMDALAAAMGKKR
>Mature_776_residues
MMNDSFCRIIAGEIQANAGQVEAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLGYLRELEDRRQAILKSISEQ
GKLTDELAGAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGLEPLADLLWNEPSHDPDVEAAKYIDGDKGVADTKAALD
GARYILMERFAEDAALLAKVRDYLWKNAHLVATVVSGKEEEGAKFRDYFDHHEPIANVPSHRALAMFRGRNEGILQLSLN
ADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRERAEDEAINVFARNLHDLLM
AAPAGLRATMGLDPGLRTGVKVAVVDGTGKLVATDTIYPHTGQAAKAATVIAALCEKYHVELVAIGNGTASRETERFYLD
VQKQFPNVTAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLA
RKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGD
NPLDASTVHPEAYPVVERILAATQQALKDLMGNSNELRHLKAADFTDDKFGVPTVSDIIKELEKPGRDPRPEFKTAQFAD
GVETMNDLLPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR
LDEQPGETAARRGGGADRAQGNRPASKAAKPRGRDAQPAGNSAMMDALAAAMGKKR

Specific function: Unknown

COG id: COG2183

COG function: function code K; Transcriptional accessory protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1 motif domain [H]

Homologues:

Organism=Homo sapiens, GI221136781, Length=776, Percent_Identity=34.7938144329897, Blast_Score=403, Evalue=1e-112,
Organism=Homo sapiens, GI27597090, Length=705, Percent_Identity=22.8368794326241, Blast_Score=97, Evalue=6e-20,
Organism=Escherichia coli, GI87082262, Length=776, Percent_Identity=94.3298969072165, Blast_Score=1467, Evalue=0.0,
Organism=Escherichia coli, GI1787140, Length=89, Percent_Identity=41.5730337078652, Blast_Score=69, Evalue=9e-13,
Organism=Caenorhabditis elegans, GI17511129, Length=722, Percent_Identity=27.1468144044321, Blast_Score=218, Evalue=8e-57,
Organism=Caenorhabditis elegans, GI17552892, Length=294, Percent_Identity=28.2312925170068, Blast_Score=86, Evalue=8e-17,
Organism=Saccharomyces cerevisiae, GI6321552, Length=229, Percent_Identity=26.6375545851528, Blast_Score=73, Evalue=2e-13,
Organism=Drosophila melanogaster, GI62484314, Length=770, Percent_Identity=31.2987012987013, Blast_Score=350, Evalue=2e-96,
Organism=Drosophila melanogaster, GI24640080, Length=448, Percent_Identity=23.4375, Blast_Score=94, Evalue=3e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR003029
- InterPro:   IPR005227
- InterPro:   IPR006641
- InterPro:   IPR022967
- InterPro:   IPR018974
- InterPro:   IPR023097 [H]

Pfam domain/function: PF00575 S1; PF09371 Tex_N [H]

EC number: NA

Molecular weight: Translated: 85023; Mature: 85023

Theoretical pI: Translated: 6.00; Mature: 6.00

Prosite motif: PS50126 S1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMNDSFCRIIAGEIQANAGQVEAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRL
CCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHH
GYLRELEDRRQAILKSISEQGKLTDELAGAINATLSKTELEDLYLPYKPKRRTRGQIAIE
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEE
AGLEPLADLLWNEPSHDPDVEAAKYIDGDKGVADTKAALDGARYILMERFAEDAALLAKV
CCCHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
RDYLWKNAHLVATVVSGKEEEGAKFRDYFDHHEPIANVPSHRALAMFRGRNEGILQLSLN
HHHHHCCCEEEEEEECCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCEEEEEEC
ADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVR
CCCCCCCCCHHHHHHHHHHHHHCCEECCCCCHHHHCCCEEEEEEEEEHHHHHHHHHHHHH
ERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDGTGKLVATDTIYPH
HHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCEEEEEECCCCEEEECCCCCC
TGQAAKAATVIAALCEKYHVELVAIGNGTASRETERFYLDVQKQFPNVTAQKVIVSEAGA
CCCHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCHHHEEEHHHHCCCHHHHHHHHHHCCC
SVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLA
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
RKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVS
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHH
RLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSNELRHL
HCCHHHHHHHHCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHCEE
KAADFTDDKFGVPTVSDIIKELEKPGRDPRPEFKTAQFADGVETMNDLLPGMILEGAVTN
ECCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHH
VTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR
HHHCCCEEEECCCCCCCEEHHHHHHHHHCCCHHHEECCCEEEEEEEEEECCCCEEEEEEE
LDEQPGETAARRGGGADRAQGNRPASKAAKPRGRDAQPAGNSAMMDALAAAMGKKR
ECCCCCHHHHHCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MMNDSFCRIIAGEIQANAGQVEAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRL
CCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHH
GYLRELEDRRQAILKSISEQGKLTDELAGAINATLSKTELEDLYLPYKPKRRTRGQIAIE
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEE
AGLEPLADLLWNEPSHDPDVEAAKYIDGDKGVADTKAALDGARYILMERFAEDAALLAKV
CCCHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
RDYLWKNAHLVATVVSGKEEEGAKFRDYFDHHEPIANVPSHRALAMFRGRNEGILQLSLN
HHHHHCCCEEEEEEECCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCEEEEEEC
ADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVR
CCCCCCCCCHHHHHHHHHHHHHCCEECCCCCHHHHCCCEEEEEEEEEHHHHHHHHHHHHH
ERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDGTGKLVATDTIYPH
HHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCEEEEEECCCCEEEECCCCCC
TGQAAKAATVIAALCEKYHVELVAIGNGTASRETERFYLDVQKQFPNVTAQKVIVSEAGA
CCCHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCHHHEEEHHHHCCCHHHHHHHHHHCCC
SVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLA
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
RKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVS
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHH
RLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSNELRHL
HCCHHHHHHHHCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHCEE
KAADFTDDKFGVPTVSDIIKELEKPGRDPRPEFKTAQFADGVETMNDLLPGMILEGAVTN
ECCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHH
VTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR
HHHCCCEEEECCCCCCCEEHHHHHHHHHCCCHHHEECCCEEEEEEEEEECCCCEEEEEEE
LDEQPGETAARRGGGADRAQGNRPASKAAKPRGRDAQPAGNSAMMDALAAAMGKKR
ECCCCCHHHHHCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503; 10493123 [H]