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The map label for this gene is rdoA [H]

Identifier: 194734981

GI number: 194734981

Start: 4081533

End: 4082519

Strand: Direct

Name: rdoA [H]

Synonym: SeSA_A4206

Alternate gene names: 194734981

Gene position: 4081533-4082519 (Clockwise)

Preceding gene: 194737291

Following gene: 194734971

Centisome position: 86.67

GC content: 48.83

Gene sequence:

>987_bases
ATGAACGACAACGCTTTTACTTTCCAGACGCTACACCCGGAAACCATCATGGATGCGCTGTTTGAACAGGGGATCAGGGT
GGATTCCGGGCTGACTCCACTAAACAGTTATGAAAACCGCGTCTATCAGTTTCAGGATGAAGACCGTCGACGTTTTGTCG
TTAAGTTTTATCGTCCTGAACGCTGGTCTGTTGATCAAATTCGGGAAGAACACCAATTCGCGCTTGAACTGGTGAAGGAT
GAGGTTCCGGTTGCTGCTCCGCTCGCGTTTAATGGCCAGACGCTGTTAGCGCATCAGGGCTATCATTATGCCATTTTCCC
CAGCGTAGGCGGTCGTCAGTTTGAAGCAGACAATATTGATCAGATGGAGGCGGTAGGGCGTTATCTTGGTCGATTGCATC
AGACGGGGCGAAAACGTCCTTTCACTTTCCGGCCTGACATTGGGCTTGCAGAGTATCTTTTTGAACCTCGTCAGGTATTC
GAAGATGCCGCACTGATTCCCTCCGGGCAAAAAGCGGCTTTCCTGAAAGCCACTGATACTCTACTGTCTGCAGTTACCGA
ATGCTGGCGCACCGATTTCGCCACGCTGCGATTGCACGGCGATTGTCATGCCGGCAACATTCTATGGCGTGATGGACCGC
TGTTTGTCGATTTAGATGATGCCCGTAACGGTCCGGCGATACAGGATTTATGGATGCTGCTGAACGGCGACAAAGCCGAA
CAGCGAATGCAGCTTGAAACCATTATTGAAGCTTATGAAGAAGTTAGTGAGTTCGATACGGCTGAAATTGGCCTCATTGA
ACCTTTACGTGCCATGCGTTTAGTTTATTATCTTGCCTGGTTGATTCGTCGTTGGGGCGATCCTGCGTTTCCAAAAAACT
TTCCCTGGTTAACAGGGGAAGATTACTGGCAGCGACAGACAACGACTTTTATTGAGCAGACTAAAATTTTGCACGAACCC
CCTTTACAATTAACGCCAATGTATTAA

Upstream 100 bases:

>100_bases
GCCCGCGGCGTTATTAAAGAGTAAAACCTTGTAAGCGGCGCCACCGAAATCGTCACGAAATGATATCCTGAATCATTCGT
AGTATTTTCCGGATGATGGG

Downstream 100 bases:

>100_bases
TCGGAGAGAGTTGATCATGAAAAAGATTTGGCTGGCGCTGGCTGGTATGGTTTTAGCTTTTAGCGCCTCGGCAGCACAGA
TCAGCGACGGTAAACAGTAT

Product: serine/threonine protein kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 328; Mature: 328

Protein sequence:

>328_residues
MNDNAFTFQTLHPETIMDALFEQGIRVDSGLTPLNSYENRVYQFQDEDRRRFVVKFYRPERWSVDQIREEHQFALELVKD
EVPVAAPLAFNGQTLLAHQGYHYAIFPSVGGRQFEADNIDQMEAVGRYLGRLHQTGRKRPFTFRPDIGLAEYLFEPRQVF
EDAALIPSGQKAAFLKATDTLLSAVTECWRTDFATLRLHGDCHAGNILWRDGPLFVDLDDARNGPAIQDLWMLLNGDKAE
QRMQLETIIEAYEEVSEFDTAEIGLIEPLRAMRLVYYLAWLIRRWGDPAFPKNFPWLTGEDYWQRQTTTFIEQTKILHEP
PLQLTPMY

Sequences:

>Translated_328_residues
MNDNAFTFQTLHPETIMDALFEQGIRVDSGLTPLNSYENRVYQFQDEDRRRFVVKFYRPERWSVDQIREEHQFALELVKD
EVPVAAPLAFNGQTLLAHQGYHYAIFPSVGGRQFEADNIDQMEAVGRYLGRLHQTGRKRPFTFRPDIGLAEYLFEPRQVF
EDAALIPSGQKAAFLKATDTLLSAVTECWRTDFATLRLHGDCHAGNILWRDGPLFVDLDDARNGPAIQDLWMLLNGDKAE
QRMQLETIIEAYEEVSEFDTAEIGLIEPLRAMRLVYYLAWLIRRWGDPAFPKNFPWLTGEDYWQRQTTTFIEQTKILHEP
PLQLTPMY
>Mature_328_residues
MNDNAFTFQTLHPETIMDALFEQGIRVDSGLTPLNSYENRVYQFQDEDRRRFVVKFYRPERWSVDQIREEHQFALELVKD
EVPVAAPLAFNGQTLLAHQGYHYAIFPSVGGRQFEADNIDQMEAVGRYLGRLHQTGRKRPFTFRPDIGLAEYLFEPRQVF
EDAALIPSGQKAAFLKATDTLLSAVTECWRTDFATLRLHGDCHAGNILWRDGPLFVDLDDARNGPAIQDLWMLLNGDKAE
QRMQLETIIEAYEEVSEFDTAEIGLIEPLRAMRLVYYLAWLIRRWGDPAFPKNFPWLTGEDYWQRQTTTFIEQTKILHEP
PLQLTPMY

Specific function: Probably involved in the extracytoplasmic stress response [H]

COG id: COG2334

COG function: function code R; Putative homoserine kinase type II (protein kinase fold)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rdoA family [H]

Homologues:

Organism=Escherichia coli, GI1790290, Length=328, Percent_Identity=86.280487804878, Blast_Score=598, Evalue=1e-172,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002575
- InterPro:   IPR011009 [H]

Pfam domain/function: PF01636 APH [H]

EC number: NA

Molecular weight: Translated: 38155; Mature: 38155

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDNAFTFQTLHPETIMDALFEQGIRVDSGLTPLNSYENRVYQFQDEDRRRFVVKFYRPE
CCCCEEEEEECCHHHHHHHHHHCCCCCCCCCCCCHHHHHHEEECCCCCCCEEEEEEECCC
RWSVDQIREEHQFALELVKDEVPVAAPLAFNGQTLLAHQGYHYAIFPSVGGRQFEADNID
CCCHHHHHHHHHHHHHHHHHCCCEECEEEECCCEEEEECCCEEEEECCCCCCEECCCCHH
QMEAVGRYLGRLHQTGRKRPFTFRPDIGLAEYLFEPRQVFEDAALIPSGQKAAFLKATDT
HHHHHHHHHHHHHHHCCCCCCEECCCCCHHHHHCCHHHHHHHHHCCCCCCCEEEHHHHHH
LLSAVTECWRTDFATLRLHGDCHAGNILWRDGPLFVDLDDARNGPAIQDLWMLLNGDKAE
HHHHHHHHHHCCCEEEEEECCCCCCCEEEECCCEEEEECCCCCCCHHHHHHHHHCCCHHH
QRMQLETIIEAYEEVSEFDTAEIGLIEPLRAMRLVYYLAWLIRRWGDPAFPKNFPWLTGE
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
DYWQRQTTTFIEQTKILHEPPLQLTPMY
HHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MNDNAFTFQTLHPETIMDALFEQGIRVDSGLTPLNSYENRVYQFQDEDRRRFVVKFYRPE
CCCCEEEEEECCHHHHHHHHHHCCCCCCCCCCCCHHHHHHEEECCCCCCCEEEEEEECCC
RWSVDQIREEHQFALELVKDEVPVAAPLAFNGQTLLAHQGYHYAIFPSVGGRQFEADNID
CCCHHHHHHHHHHHHHHHHHCCCEECEEEECCCEEEEECCCEEEEECCCCCCEECCCCHH
QMEAVGRYLGRLHQTGRKRPFTFRPDIGLAEYLFEPRQVFEDAALIPSGQKAAFLKATDT
HHHHHHHHHHHHHHHCCCCCCEECCCCCHHHHHCCHHHHHHHHHCCCCCCCEEEHHHHHH
LLSAVTECWRTDFATLRLHGDCHAGNILWRDGPLFVDLDDARNGPAIQDLWMLLNGDKAE
HHHHHHHHHHCCCEEEEEECCCCCCCEEEECCCEEEEECCCCCCCHHHHHHHHHCCCHHH
QRMQLETIIEAYEEVSEFDTAEIGLIEPLRAMRLVYYLAWLIRRWGDPAFPKNFPWLTGE
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
DYWQRQTTTFIEQTKILHEPPLQLTPMY
HHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA