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The map label for this gene is yceB

Identifier: 194734955

GI number: 194734955

Start: 1207971

End: 1208531

Strand: Reverse

Name: yceB

Synonym: SeSA_A1232

Alternate gene names: 194734955

Gene position: 1208531-1207971 (Counterclockwise)

Preceding gene: 194734424

Following gene: 194738348

Centisome position: 25.66

GC content: 45.99

Gene sequence:

>561_bases
ATGAAAAAGTTTTTTTTTGCCGCTGCGCTGGTAGTTAGCGGCCTGTTAGTGGGTTGTAATCAACTTACGCAATACACCAT
TAGCGAACAAGAAATCAATCAAGCGCTTGAAAAACGGAATAATTTCTCAAAAGATATTGGTCTGCCCGGCATTGCCGACG
CGCATATCGTATTGACTAACCTTGTCAGCCAGATTGGTCGGGAAGAGCCTAATAAAGTCACCCTTACTGGCGATGCCAGG
CTGGATATGAATTCCCTGTTTGGCAGTCAAAAAGCGACGATGAAACTCAAGCTAAAAGCCCTGCCGGTCTTTGATAAAGA
AAAAGGCGCCATCTATCTTCAGGAGATGGAAGTAGTAGACGCCACCGTGACGCCGGAGAAAATGCAATCGGTGCTACAAA
CGCTCCTGCCCTATTTAAATCAGTCTTTACGTAGCTACTTTAACCAGCGGCCCGCTTACGTGTTGCGTGAGGACAGCAGT
AAAGGCGAAGCGTTAGCGAAGAAACTCGCGAAAGGCATTGAAGTTAAACCTGGTGAAATCGTTATTCCTTTCACCAATTG
A

Upstream 100 bases:

>100_bases
TTGCCGCCTTTTTCAGCTTTTTCTAGTGGCGCCATGTCCGCTGGCGCGACATGCTGCTTTGTGTCAAGATTAGGGCACAG
GCAACATGCTAAGGAACGCC

Downstream 100 bases:

>100_bases
TTTCGGAGGGCGCGCTCGCGCCCTTTTTTTACGTGCAAACGAAAACGTTTCCGCTTATCCTTTGTTTCCGGCAAAAAGAC
TATTCCTCAGCCGGAGCTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 186; Mature: 186

Protein sequence:

>186_residues
MKKFFFAAALVVSGLLVGCNQLTQYTISEQEINQALEKRNNFSKDIGLPGIADAHIVLTNLVSQIGREEPNKVTLTGDAR
LDMNSLFGSQKATMKLKLKALPVFDKEKGAIYLQEMEVVDATVTPEKMQSVLQTLLPYLNQSLRSYFNQRPAYVLREDSS
KGEALAKKLAKGIEVKPGEIVIPFTN

Sequences:

>Translated_186_residues
MKKFFFAAALVVSGLLVGCNQLTQYTISEQEINQALEKRNNFSKDIGLPGIADAHIVLTNLVSQIGREEPNKVTLTGDAR
LDMNSLFGSQKATMKLKLKALPVFDKEKGAIYLQEMEVVDATVTPEKMQSVLQTLLPYLNQSLRSYFNQRPAYVLREDSS
KGEALAKKLAKGIEVKPGEIVIPFTN
>Mature_186_residues
MKKFFFAAALVVSGLLVGCNQLTQYTISEQEINQALEKRNNFSKDIGLPGIADAHIVLTNLVSQIGREEPNKVTLTGDAR
LDMNSLFGSQKATMKLKLKALPVFDKEKGAIYLQEMEVVDATVTPEKMQSVLQTLLPYLNQSLRSYFNQRPAYVLREDSS
KGEALAKKLAKGIEVKPGEIVIPFTN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787302, Length=186, Percent_Identity=88.1720430107527, Blast_Score=345, Evalue=1e-96,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YCEB_SALTY (P40822)

Other databases:

- EMBL:   AE006468
- EMBL:   X03928
- RefSeq:   NP_460135.1
- ProteinModelPortal:   P40822
- PRIDE:   P40822
- GeneID:   1252682
- GenomeReviews:   AE006468_GR
- KEGG:   stm:STM1164
- HOGENOM:   HBG416339
- OMA:   NQALMAK
- ProtClustDB:   PRK10598
- BioCyc:   STYP99287:STM1164-MONOMER
- InterPro:   IPR010835

Pfam domain/function: PF07273 DUF1439

EC number: NA

Molecular weight: Translated: 20620; Mature: 20620

Theoretical pI: Translated: 9.33; Mature: 9.33

Prosite motif: PS51257 PROKAR_LIPOPROTEIN; PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKFFFAAALVVSGLLVGCNQLTQYTISEQEINQALEKRNNFSKDIGLPGIADAHIVLTN
CCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH
LVSQIGREEPNKVTLTGDARLDMNSLFGSQKATMKLKLKALPVFDKEKGAIYLQEMEVVD
HHHHHCCCCCCEEEEECCCCCCHHHHHCCCCCEEEEEEEECCCEECCCCEEEEEEHHHHC
ATVTPEKMQSVLQTLLPYLNQSLRSYFNQRPAYVLREDSSKGEALAKKLAKGIEVKPGEI
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHCCCCCCCCCE
VIPFTN
EEECCC
>Mature Secondary Structure
MKKFFFAAALVVSGLLVGCNQLTQYTISEQEINQALEKRNNFSKDIGLPGIADAHIVLTN
CCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH
LVSQIGREEPNKVTLTGDARLDMNSLFGSQKATMKLKLKALPVFDKEKGAIYLQEMEVVD
HHHHHCCCCCCEEEEECCCCCCHHHHHCCCCCEEEEEEEECCCEECCCCEEEEEEHHHHC
ATVTPEKMQSVLQTLLPYLNQSLRSYFNQRPAYVLREDSSKGEALAKKLAKGIEVKPGEI
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHCCCCCCCCCE
VIPFTN
EEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11677609; 2872051