| Definition | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 chromosome, complete genome. |
|---|---|
| Accession | NC_011094 |
| Length | 4,709,075 |
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The map label for this gene is yegS [H]
Identifier: 194734764
GI number: 194734764
Start: 2254662
End: 2255561
Strand: Direct
Name: yegS [H]
Synonym: SeSA_A2376
Alternate gene names: 194734764
Gene position: 2254662-2255561 (Clockwise)
Preceding gene: 194735950
Following gene: 194738317
Centisome position: 47.88
GC content: 55.33
Gene sequence:
>900_bases ATGGCTAACTTTCCCGCCAGCTTACTGATACTCAATGGCAAAAGCGCTGATAACCAGCCGCTACGTGAGGCCATTACTCT CCTTCGCGACGAAGGCATACAGATTCACGTTCGGGTAACCTGGGAAAAAGGCGACGCGCAGCGTTACGTTGATGAAGCCC GTAGACTGGGCGTTGAAACGGTGATTGCCGGCGGCGGAGACGGTACCATTAATGAAGTGTCGACCGCGCTCATCCAGATC CGCGACGGCGTAGCCCCTGCACTGGGCCTTTTGCCGCTCGGCACTGCCAACGATTTTGCCACCAGCGCCGGTATTCCTGA AGCGCTGGACAAAGCGCTGAAACTGGCGATTGCCGGAAACGCGATGGAAATTGATATGGCCAGGGTCAATGATAAAACCT GTTTTATCAATATGGCGACGGGCGGTTTTGGCACCCGCATTACCACTGAAACGCCGGAAAAACTCAAGGCCGCGTTGGGC GGCGTCTCCTATCTTATCCACGGTCTGATGAGAATGGATACGCTGACCCCTGACCGCTGCGAAATACGTGGCGAAAACTT TCACTGGCAGGGAGATGCGCTGGTGATCGGCATCGGCAACGGTCGTCAGGCCGGCGGCGGGCAGCAATTATGTCCCACCG CGCTGATTAACGACGGACTGTTACAGCTACGGATTTTTACCGGCGAAGAGCTGCTGCCGGCGCTGTTTTCCACACTCACG CAGTCAGATGACAATCCGAATATTATTGACGGCGCCTCGGCGTGGTTTGATATTCATGCGCCGCATGAAATCACGTTTAA TCTGGATGGCGAACCACTCAGCGGACAAGAATTTCATATTGAGGTGCTACCTGGCGCATTACGCTGTCGGCTGCCGCCAG ACTGCCCGTTGCTACGTTAA
Upstream 100 bases:
>100_bases AGTGCGCAACATTTCAATTTTCATCCTGTTCTGACCTCGCTTTTTCATTTCTGCTATACACTTTCTGGAGATTGTTGTTC AACCTATTAAGGCATAACGG
Downstream 100 bases:
>100_bases TAACACCTGTCGCTGGCCGGATGCGCTCACATCCGGCTTTTCTTCGTTAAACTCAGGCGATGGTGACTTTGCTATCCAGA TAGACATCCTGTACGGCGTT
Product: lipid kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 299; Mature: 298
Protein sequence:
>299_residues MANFPASLLILNGKSADNQPLREAITLLRDEGIQIHVRVTWEKGDAQRYVDEARRLGVETVIAGGGDGTINEVSTALIQI RDGVAPALGLLPLGTANDFATSAGIPEALDKALKLAIAGNAMEIDMARVNDKTCFINMATGGFGTRITTETPEKLKAALG GVSYLIHGLMRMDTLTPDRCEIRGENFHWQGDALVIGIGNGRQAGGGQQLCPTALINDGLLQLRIFTGEELLPALFSTLT QSDDNPNIIDGASAWFDIHAPHEITFNLDGEPLSGQEFHIEVLPGALRCRLPPDCPLLR
Sequences:
>Translated_299_residues MANFPASLLILNGKSADNQPLREAITLLRDEGIQIHVRVTWEKGDAQRYVDEARRLGVETVIAGGGDGTINEVSTALIQI RDGVAPALGLLPLGTANDFATSAGIPEALDKALKLAIAGNAMEIDMARVNDKTCFINMATGGFGTRITTETPEKLKAALG GVSYLIHGLMRMDTLTPDRCEIRGENFHWQGDALVIGIGNGRQAGGGQQLCPTALINDGLLQLRIFTGEELLPALFSTLT QSDDNPNIIDGASAWFDIHAPHEITFNLDGEPLSGQEFHIEVLPGALRCRLPPDCPLLR >Mature_298_residues ANFPASLLILNGKSADNQPLREAITLLRDEGIQIHVRVTWEKGDAQRYVDEARRLGVETVIAGGGDGTINEVSTALIQIR DGVAPALGLLPLGTANDFATSAGIPEALDKALKLAIAGNAMEIDMARVNDKTCFINMATGGFGTRITTETPEKLKAALGG VSYLIHGLMRMDTLTPDRCEIRGENFHWQGDALVIGIGNGRQAGGGQQLCPTALINDGLLQLRIFTGEELLPALFSTLTQ SDDNPNIIDGASAWFDIHAPHEITFNLDGEPLSGQEFHIEVLPGALRCRLPPDCPLLR
Specific function: Probably phosphorylates lipids; the in vivo substrate is unknown [H]
COG id: COG1597
COG function: function code IR; Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 DAGKc domain [H]
Homologues:
Organism=Escherichia coli, GI1788402, Length=299, Percent_Identity=85.2842809364548, Blast_Score=525, Evalue=1e-150,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005218 - InterPro: IPR001206 - InterPro: IPR022433 - InterPro: IPR022862 [H]
Pfam domain/function: PF00781 DAGK_cat [H]
EC number: NA
Molecular weight: Translated: 32054; Mature: 31923
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANFPASLLILNGKSADNQPLREAITLLRDEGIQIHVRVTWEKGDAQRYVDEARRLGVET CCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEEEEECCCHHHHHHHHHHCCEEE VIAGGGDGTINEVSTALIQIRDGVAPALGLLPLGTANDFATSAGIPEALDKALKLAIAGN EEECCCCCCHHHHHHHHHHHHCCCCCHHHEEECCCCCCHHHCCCCHHHHHHHHEEEECCC AMEIDMARVNDKTCFINMATGGFGTRITTETPEKLKAALGGVSYLIHGLMRMDTLTPDRC EEEEEEEEECCCEEEEEEECCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCE EIRGENFHWQGDALVIGIGNGRQAGGGQQLCPTALINDGLLQLRIFTGEELLPALFSTLT EECCCCEEEECCEEEEECCCCCCCCCCCCCCHHHHHCCCEEEEEEECCHHHHHHHHHHHH QSDDNPNIIDGASAWFDIHAPHEITFNLDGEPLSGQEFHIEVLPGALRCRLPPDCPLLR CCCCCCCEEECCCCEEEEECCCEEEEEECCCCCCCCEEEEEECCCEEEECCCCCCCCCC >Mature Secondary Structure ANFPASLLILNGKSADNQPLREAITLLRDEGIQIHVRVTWEKGDAQRYVDEARRLGVET CCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEEEEECCCHHHHHHHHHHCCEEE VIAGGGDGTINEVSTALIQIRDGVAPALGLLPLGTANDFATSAGIPEALDKALKLAIAGN EEECCCCCCHHHHHHHHHHHHCCCCCHHHEEECCCCCCHHHCCCCHHHHHHHHEEEECCC AMEIDMARVNDKTCFINMATGGFGTRITTETPEKLKAALGGVSYLIHGLMRMDTLTPDRC EEEEEEEEECCCEEEEEEECCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCE EIRGENFHWQGDALVIGIGNGRQAGGGQQLCPTALINDGLLQLRIFTGEELLPALFSTLT EECCCCEEEECCEEEEECCCCCCCCCCCCCCHHHHHCCCEEEEEEECCHHHHHHHHHHHH QSDDNPNIIDGASAWFDIHAPHEITFNLDGEPLSGQEFHIEVLPGALRCRLPPDCPLLR CCCCCCCEEECCCCEEEEECCCEEEEEECCCCCCCCEEEEEECCCEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA