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The map label for this gene is yiiY [H]

Identifier: 194734730

GI number: 194734730

Start: 4139613

End: 4140284

Strand: Direct

Name: yiiY [H]

Synonym: SeSA_A4268

Alternate gene names: 194734730

Gene position: 4139613-4140284 (Clockwise)

Preceding gene: 194735097

Following gene: 194736704

Centisome position: 87.91

GC content: 41.82

Gene sequence:

>672_bases
ATGAGAAAATCTCTTTTCTTACTATTACCTCTTGTTGTAACAAATGCGCATGCAGTATATGTCGATGTTCGTCATGAATA
TCTTGACGACAGTAAAGCTAACTATGACCGTGCGTATATTTCTCATCGGTTTGCGAATGGTTTTGGTTTTGCGATAGAAG
CTATCTCAAAATCAGGCGGGGATGACACCAATAAAGCGTTTAATGACCTGGAAACACAGGGCAACGAATATACGATAAGC
TACCAATTTAAAACCGGTGATGTCGCCTGGCAACCGGGTTTTGTGCTGGAAACCGGCAATGGTTACTCTACCTATAAGCC
TTACTTCCGCGCGACGTGGACATTAAATGAAAGCTGGTGGGTTGGTGCGCGCTATCGTTTTGAATATGTACGCCGTTCTT
CTGATATCCGTGATGATGATACCATCAATCGTATGGATGTCTGGGCGGGTTATAAATGGAACAACTTTGACTGGACAATC
GAAGGAATTTATAAGAAAGCTGATAAATATGATCTTTACGATGGCGGCAAAGATAACTATGAATATAACTTCAGAACTGC
CTATATTATTGATCAATGGTCGCCATTCGTTGAGGTAGGTAATGTTTCCGTCAATAGCAACAGCGATGAAAGACAAACCC
GTTTCCGCGTGGGTATAGGCTACACATTCTAA

Upstream 100 bases:

>100_bases
AAAGATCTTTGCCTATATTGTCGCCATTCACATTGCGTATTATGGTTGTAACGGCCTGACATAAAACAACGTTTTAATTT
TAAATTAAATGGATTCTGTT

Downstream 100 bases:

>100_bases
TCATTATCCCTGTTTATTATTTATTCCCTTTTCCGGCTACTTTATAGGTAGCCGGTTTTTTTTACCTGGTGATGACCTGC
GGATAATTATTATCGTGCGT

Product: oligogalacturonate-specific porin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 223; Mature: 223

Protein sequence:

>223_residues
MRKSLFLLLPLVVTNAHAVYVDVRHEYLDDSKANYDRAYISHRFANGFGFAIEAISKSGGDDTNKAFNDLETQGNEYTIS
YQFKTGDVAWQPGFVLETGNGYSTYKPYFRATWTLNESWWVGARYRFEYVRRSSDIRDDDTINRMDVWAGYKWNNFDWTI
EGIYKKADKYDLYDGGKDNYEYNFRTAYIIDQWSPFVEVGNVSVNSNSDERQTRFRVGIGYTF

Sequences:

>Translated_223_residues
MRKSLFLLLPLVVTNAHAVYVDVRHEYLDDSKANYDRAYISHRFANGFGFAIEAISKSGGDDTNKAFNDLETQGNEYTIS
YQFKTGDVAWQPGFVLETGNGYSTYKPYFRATWTLNESWWVGARYRFEYVRRSSDIRDDDTINRMDVWAGYKWNNFDWTI
EGIYKKADKYDLYDGGKDNYEYNFRTAYIIDQWSPFVEVGNVSVNSNSDERQTRFRVGIGYTF
>Mature_223_residues
MRKSLFLLLPLVVTNAHAVYVDVRHEYLDDSKANYDRAYISHRFANGFGFAIEAISKSGGDDTNKAFNDLETQGNEYTIS
YQFKTGDVAWQPGFVLETGNGYSTYKPYFRATWTLNESWWVGARYRFEYVRRSSDIRDDDTINRMDVWAGYKWNNFDWTI
EGIYKKADKYDLYDGGKDNYEYNFRTAYIIDQWSPFVEVGNVSVNSNSDERQTRFRVGIGYTF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009331
- InterPro:   IPR011250 [H]

Pfam domain/function: PF06178 KdgM [H]

EC number: NA

Molecular weight: Translated: 26135; Mature: 26135

Theoretical pI: Translated: 5.12; Mature: 5.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKSLFLLLPLVVTNAHAVYVDVRHEYLDDSKANYDRAYISHRFANGFGFAIEAISKSGG
CCCCCEEEEEHHHCCCEEEEEEEEHHHCCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCC
DDTNKAFNDLETQGNEYTISYQFKTGDVAWQPGFVLETGNGYSTYKPYFRATWTLNESWW
CCCHHHHHHHHCCCCEEEEEEEEECCCEEECCCEEEECCCCCCCCCCEEEEEEEECCCEE
VGARYRFEYVRRSSDIRDDDTINRMDVWAGYKWNNFDWTIEGIYKKADKYDLYDGGKDNY
ECEEEEEEEHHCCCCCCCCCCCCEEEEEECCEECCCCEEEEEEEECCCCCCCCCCCCCCE
EYNFRTAYIIDQWSPFVEVGNVSVNSNSDERQTRFRVGIGYTF
EEEEEEEEEEECCCCEEEECEEEECCCCCCCEEEEEEEEEECC
>Mature Secondary Structure
MRKSLFLLLPLVVTNAHAVYVDVRHEYLDDSKANYDRAYISHRFANGFGFAIEAISKSGG
CCCCCEEEEEHHHCCCEEEEEEEEHHHCCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCC
DDTNKAFNDLETQGNEYTISYQFKTGDVAWQPGFVLETGNGYSTYKPYFRATWTLNESWW
CCCHHHHHHHHCCCCEEEEEEEEECCCEEECCCEEEECCCCCCCCCCEEEEEEEECCCEE
VGARYRFEYVRRSSDIRDDDTINRMDVWAGYKWNNFDWTIEGIYKKADKYDLYDGGKDNY
ECEEEEEEEHHCCCCCCCCCCCCEEEEEECCEECCCCEEEEEEEECCCCCCCCCCCCCCE
EYNFRTAYIIDQWSPFVEVGNVSVNSNSDERQTRFRVGIGYTF
EEEEEEEEEEECCCCEEEECEEEECCCCCCCEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]