| Definition | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 chromosome, complete genome. |
|---|---|
| Accession | NC_011094 |
| Length | 4,709,075 |
Click here to switch to the map view.
The map label for this gene is ytgA [H]
Identifier: 194734692
GI number: 194734692
Start: 4590421
End: 4590909
Strand: Reverse
Name: ytgA [H]
Synonym: SeSA_A4728
Alternate gene names: 194734692
Gene position: 4590909-4590421 (Counterclockwise)
Preceding gene: 194734922
Following gene: 194737318
Centisome position: 97.49
GC content: 38.04
Gene sequence:
>489_bases ATGAAACGCCTATTATCAGCAATTGTTTTCCCCGCTATGTTTATTAGTATCTCTAATGTATATGCATTAGATATACAGCC CGGCGAATGGAAAATGGAAAATATAGAAATGCGCACCATCAATCCAGATACAAAAGAAGTATTAATGGATGAAAAAAATT CGGGCATAGCGACGCTTATGTGTTATACCCCTAAAATGTCTGAAGATTCTAAAAAAATGGTGAAGGGTTTTTCTACCAGT GCAGGCGGTTGCACGACAACATTTGTAGAAAGTACGGATACCAAACTGATCAATGAGACTGTGTGTAATAATCCTGATGC CAAATCGCACTCTATTGTAGAAACGACGAAAATAAGTGATACAGAATTTGCGATGACCATGAAATCAGATGTCGATGCAG GAGGTAATAAAACAACCTCCATCAACAAAATTAAACAAACCTTTGTTGGCAAGACCTGCTCTGAAGCGTCAAAAGGCGTG AAACAGTAA
Upstream 100 bases:
>100_bases GGCGTTTATTTATCCTCGCCAGGTATTATTTTTGCTGATATAAGTAATCCCGGAAACATCCTGTTATCCGGGAATCACTT ATTATTCAAGGAAGTTATAA
Downstream 100 bases:
>100_bases GTATTTCAACACAAGAACCCGTAGTGATGATGCAAAAAGGGCATTGTTCAAGGTCACCTTTCGGGAATATAACACTGAGT GAGTTCTTTTTGCCTGCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 162; Mature: 162
Protein sequence:
>162_residues MKRLLSAIVFPAMFISISNVYALDIQPGEWKMENIEMRTINPDTKEVLMDEKNSGIATLMCYTPKMSEDSKKMVKGFSTS AGGCTTTFVESTDTKLINETVCNNPDAKSHSIVETTKISDTEFAMTMKSDVDAGGNKTTSINKIKQTFVGKTCSEASKGV KQ
Sequences:
>Translated_162_residues MKRLLSAIVFPAMFISISNVYALDIQPGEWKMENIEMRTINPDTKEVLMDEKNSGIATLMCYTPKMSEDSKKMVKGFSTS AGGCTTTFVESTDTKLINETVCNNPDAKSHSIVETTKISDTEFAMTMKSDVDAGGNKTTSINKIKQTFVGKTCSEASKGV KQ >Mature_162_residues MKRLLSAIVFPAMFISISNVYALDIQPGEWKMENIEMRTINPDTKEVLMDEKNSGIATLMCYTPKMSEDSKKMVKGFSTS AGGCTTTFVESTDTKLINETVCNNPDAKSHSIVETTKISDTEFAMTMKSDVDAGGNKTTSINKIKQTFVGKTCSEASKGV KQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022061 [H]
Pfam domain/function: PF12276 DUF3617 [H]
EC number: NA
Molecular weight: Translated: 17744; Mature: 17744
Theoretical pI: Translated: 7.13; Mature: 7.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 6.2 %Met (Translated Protein) 8.6 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 6.2 %Met (Mature Protein) 8.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRLLSAIVFPAMFISISNVYALDIQPGEWKMENIEMRTINPDTKEVLMDEKNSGIATLM CHHHHHHHHHHHHHHHHCCEEEEEECCCCEEECCEEEEEECCCHHHHHHCCCCCCEEEEE CYTPKMSEDSKKMVKGFSTSAGGCTTTFVESTDTKLINETVCNNPDAKSHSIVETTKISD EECCCCCCHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHCCCCCCCCCCEEEEECCCC TEFAMTMKSDVDAGGNKTTSINKIKQTFVGKTCSEASKGVKQ CCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCHHHHHCCCCC >Mature Secondary Structure MKRLLSAIVFPAMFISISNVYALDIQPGEWKMENIEMRTINPDTKEVLMDEKNSGIATLM CHHHHHHHHHHHHHHHHCCEEEEEECCCCEEECCEEEEEECCCHHHHHHCCCCCCEEEEE CYTPKMSEDSKKMVKGFSTSAGGCTTTFVESTDTKLINETVCNNPDAKSHSIVETTKISD EECCCCCCHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHCCCCCCCCCCEEEEECCCC TEFAMTMKSDVDAGGNKTTSINKIKQTFVGKTCSEASKGVKQ CCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11677608; 12644504 [H]