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The map label for this gene is citD

Identifier: 194734690

GI number: 194734690

Start: 69707

End: 70000

Strand: Direct

Name: citD

Synonym: SeSA_A0065

Alternate gene names: 194734690

Gene position: 69707-70000 (Clockwise)

Preceding gene: 194734877

Following gene: 194734726

Centisome position: 1.48

GC content: 56.8

Gene sequence:

>294_bases
ATGAAAATCATTAAAGATGCCCTGGCAGGCACGCTGGAATCCAGCGATGTGATGATCAGGATTGGTCCATCCAGCGAGCC
AGGAATTCGGCTGGAGCTAGAGAGTCTGGTGAAGCAGCAGTTTGGCGCGGCGATTGAGCAAGTCGTGCGCGAAACGCTGG
CGAAGCTGGGCGTTGAACGCGCGCTGGTTAGCGTCGATGACAAAGGCGCACTGGAGTGTATTTTACGCGCCCGAGTGCAG
GCGGCGGCGCTGCGCGCTGCAGAACAAACGGAAATTCAATGGAGTGCGTTATGA

Upstream 100 bases:

>100_bases
GCGCGCTGGTGCCTGCTGGTACCCTGGCATATCTGCAGCGGCATGCCGCCAGACACACTGAAACCATATGACGTAACACC
GTTAACAAGGAACATAACTA

Downstream 100 bases:

>100_bases
GACCACGTCGCAGTATGTTGTTTATCCCCGGCGCAAATGCGGCCATGTTGAGCACCTCGTTTGTCTATGGTGCGGACGCG
GTGATGTTCGACTTAGAAGA

Product: citrate lyase subunit gamma

Products: acetate; oxaloacetate

Alternate protein names: Citrate lyase gamma chain 2

Number of amino acids: Translated: 97; Mature: 97

Protein sequence:

>97_residues
MKIIKDALAGTLESSDVMIRIGPSSEPGIRLELESLVKQQFGAAIEQVVRETLAKLGVERALVSVDDKGALECILRARVQ
AAALRAAEQTEIQWSAL

Sequences:

>Translated_97_residues
MKIIKDALAGTLESSDVMIRIGPSSEPGIRLELESLVKQQFGAAIEQVVRETLAKLGVERALVSVDDKGALECILRARVQ
AAALRAAEQTEIQWSAL
>Mature_97_residues
MKIIKDALAGTLESSDVMIRIGPSSEPGIRLELESLVKQQFGAAIEQVVRETLAKLGVERALVSVDDKGALECILRARVQ
AAALRAAEQTEIQWSAL

Specific function: Covalent carrier of the coenzyme of citrate lyase

COG id: COG3052

COG function: function code C; Citrate lyase, gamma subunit

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CitD family

Homologues:

Organism=Escherichia coli, GI1786834, Length=94, Percent_Identity=48.936170212766, Blast_Score=88, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CITD2_SALPA (Q5PKJ6)

Other databases:

- EMBL:   CP000026
- RefSeq:   YP_149407.1
- GeneID:   3176564
- GenomeReviews:   CP000026_GR
- KEGG:   spt:SPA0060
- HOGENOM:   HBG359308
- OMA:   LAGTFES
- ProtClustDB:   PRK13253
- BioCyc:   SENT295319:SPA0060-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00805
- InterPro:   IPR006495
- InterPro:   IPR009662
- PIRSF:   PIRSF002736
- ProDom:   PD015389
- TIGRFAMs:   TIGR01608

Pfam domain/function: PF06857 MdcD

EC number: 4.1.3.6

Molecular weight: Translated: 10472; Mature: 10472

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIIKDALAGTLESSDVMIRIGPSSEPGIRLELESLVKQQFGAAIEQVVRETLAKLGVER
CCHHHHHHHCCCCCCCEEEEECCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALVSVDDKGALECILRARVQAAALRAAEQTEIQWSAL
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEECC
>Mature Secondary Structure
MKIIKDALAGTLESSDVMIRIGPSSEPGIRLELESLVKQQFGAAIEQVVRETLAKLGVER
CCHHHHHHHCCCCCCCEEEEECCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALVSVDDKGALECILRARVQAAALRAAEQTEIQWSAL
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: citrate

Specific reaction: citrate = acetate + oxaloacetate

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA