| Definition | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 chromosome, complete genome. |
|---|---|
| Accession | NC_011094 |
| Length | 4,709,075 |
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The map label for this gene is 194734674
Identifier: 194734674
GI number: 194734674
Start: 4313071
End: 4314381
Strand: Direct
Name: 194734674
Synonym: SeSA_A4434
Alternate gene names: NA
Gene position: 4313071-4314381 (Clockwise)
Preceding gene: 194735048
Following gene: 194734045
Centisome position: 91.59
GC content: 52.02
Gene sequence:
>1311_bases GTGAACAAAAACGTCAAACTTTCACTGATTGCTATTGCGGTCTCGCTTTTTATGGCAAAGCAGGCGAGCGCCGCCAATAC CTGGACGGAAGCGCGTAATGACGCAATGGGCGGGACGGGCGTTGCGTCCGCGAATTATGGCAGCGGAGTACTATTAAATC CGGCGTTACTGGCAAAAGCCAAACCGGAAGACAATATCACTGTTGTCCTTCCTGCGGTCGGCGTCCAGATTACGGATAAA GACAATCTCCAGGATGAAATTGACGATATCAGCGATAAAGTGGATTACTACGATGAGGTCGTCGATAACCTTACGCTGGG GCAAATTCTGCTCAATCCGCGAGGCGTGCTGAATCAATTTCAGGGCGCCGCGCGCGACCTGGCCGATGAGCTGGAATATC TCAACGGAAAAACCGCCCGCGCCAATGCCGGCGCCGGGTTGGCGGTAAGTATTCCAGGGCAAACGCTTTCCGTGGCGTTT ATCGCCAAAGGTTATGCGCATGGGCGCGTGAGTTCGTCCATTGATCAGAACGATATTCAGTATCTGCGCGATATCCAGCA TGATGAACGTGTCGCGCTTCGTGAAGCAGGACGCGCTGCTTTGCTGGGGTCTGACGAAATTACAAAGCATTTAAACTCTA CCGCGTCGGGGCGGGTAGCGATTGTATCTGACTACGGTATTGCGCTGGCGAAGCAGTTTGTGGTGGGCGAGGTGCCTGTT TCCATTGGCGTTACGCCAAAACTGCAAAAAACCTGGCTCTATAACTACACCACCTCAATTTATAACTACGACAGTAGCGA CTGGAATAGCAGCCGTTATCGCAATGACGATACGGGTTTTAACATTGATGCGGGGCTTGCTGCCGATATCGGTGAAAACT GGACGCTGGGGCTGAGCGGGCAAAATTTGGTATCTCGCGATATCGATACGAAAGATATTTACATCACTAATGGTATGACG GGAGAAACCACCAACTACAAAGATACATACCAAATCCGCCCCCTGGTTACCGCGGGCGTCGCATGGCATAACGATTTGCT GACCGTAAGCGCCGATGGCGATCTGACGGAAACGAAAGGCTTTAAGAGCGAAGACAATTCACAGTACGTGGGTGTCGGCA CTGAAGTTCGACCGTTGTCATGGCTGGCGGTGCGCGCAGGGTATCGTGCGGATGTGAAAAATAACGATAGCAATGTAGTT ACCGGCGGTCTTGGTTTTGCGCCCTTTAACCGTGTGCATCTCGACTTAATGGGACTGTACGGCGAAGATGAAACCTGGGG GGCAGGCGCGCAGCTTACAATGACATTCTGA
Upstream 100 bases:
>100_bases ACAACAGGATTTAACATCACTATTTCACAGCAATAGTTCGCCTCTGTCCGGTAAAGCGTGGCGGAGGAATTACTTCACCT GATAATAAGATGGGCTAACT
Downstream 100 bases:
>100_bases GGTGCTTTCACCGGAGGCGCTACGCCTCCGGTTTAGCGTTATGCTATAGTAACGCCCCTTTTTTAACCGGATGCTTATTT ATTCGCCATGCAGCCTGAAA
Product: conjugative transfer protein
Products: NA
Alternate protein names: Plasmid Transfer Protein TraF; TraF Protein; Outer Membrane Or Exported; Conjugative Transfer Protein; TraF-Related Protein; IncI1 Plasmid Conjugative Transfer Protein TraF
Number of amino acids: Translated: 436; Mature: 436
Protein sequence:
>436_residues MNKNVKLSLIAIAVSLFMAKQASAANTWTEARNDAMGGTGVASANYGSGVLLNPALLAKAKPEDNITVVLPAVGVQITDK DNLQDEIDDISDKVDYYDEVVDNLTLGQILLNPRGVLNQFQGAARDLADELEYLNGKTARANAGAGLAVSIPGQTLSVAF IAKGYAHGRVSSSIDQNDIQYLRDIQHDERVALREAGRAALLGSDEITKHLNSTASGRVAIVSDYGIALAKQFVVGEVPV SIGVTPKLQKTWLYNYTTSIYNYDSSDWNSSRYRNDDTGFNIDAGLAADIGENWTLGLSGQNLVSRDIDTKDIYITNGMT GETTNYKDTYQIRPLVTAGVAWHNDLLTVSADGDLTETKGFKSEDNSQYVGVGTEVRPLSWLAVRAGYRADVKNNDSNVV TGGLGFAPFNRVHLDLMGLYGEDETWGAGAQLTMTF
Sequences:
>Translated_436_residues MNKNVKLSLIAIAVSLFMAKQASAANTWTEARNDAMGGTGVASANYGSGVLLNPALLAKAKPEDNITVVLPAVGVQITDK DNLQDEIDDISDKVDYYDEVVDNLTLGQILLNPRGVLNQFQGAARDLADELEYLNGKTARANAGAGLAVSIPGQTLSVAF IAKGYAHGRVSSSIDQNDIQYLRDIQHDERVALREAGRAALLGSDEITKHLNSTASGRVAIVSDYGIALAKQFVVGEVPV SIGVTPKLQKTWLYNYTTSIYNYDSSDWNSSRYRNDDTGFNIDAGLAADIGENWTLGLSGQNLVSRDIDTKDIYITNGMT GETTNYKDTYQIRPLVTAGVAWHNDLLTVSADGDLTETKGFKSEDNSQYVGVGTEVRPLSWLAVRAGYRADVKNNDSNVV TGGLGFAPFNRVHLDLMGLYGEDETWGAGAQLTMTF >Mature_436_residues MNKNVKLSLIAIAVSLFMAKQASAANTWTEARNDAMGGTGVASANYGSGVLLNPALLAKAKPEDNITVVLPAVGVQITDK DNLQDEIDDISDKVDYYDEVVDNLTLGQILLNPRGVLNQFQGAARDLADELEYLNGKTARANAGAGLAVSIPGQTLSVAF IAKGYAHGRVSSSIDQNDIQYLRDIQHDERVALREAGRAALLGSDEITKHLNSTASGRVAIVSDYGIALAKQFVVGEVPV SIGVTPKLQKTWLYNYTTSIYNYDSSDWNSSRYRNDDTGFNIDAGLAADIGENWTLGLSGQNLVSRDIDTKDIYITNGMT GETTNYKDTYQIRPLVTAGVAWHNDLLTVSADGDLTETKGFKSEDNSQYVGVGTEVRPLSWLAVRAGYRADVKNNDSNVV TGGLGFAPFNRVHLDLMGLYGEDETWGAGAQLTMTF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47008; Mature: 47008
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKNVKLSLIAIAVSLFMAKQASAANTWTEARNDAMGGTGVASANYGSGVLLNPALLAKA CCCCEEEHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCCCCCEEECHHHHCCC KPEDNITVVLPAVGVQITDKDNLQDEIDDISDKVDYYDEVVDNLTLGQILLNPRGVLNQF CCCCCEEEEEEECCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCEEEHEEECCHHHHHHH QGAARDLADELEYLNGKTARANAGAGLAVSIPGQTLSVAFIAKGYAHGRVSSSIDQNDIQ HHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCEEEEEEEECCCCCCCCCCCCCHHHHH YLRDIQHDERVALREAGRAALLGSDEITKHLNSTASGRVAIVSDYGIALAKQFVVGEVPV HHHHCCCCHHHHHHHCCCEEEECCHHHHHHHCCCCCCCEEEEECCCHHHHHHHHEECCCE SIGVTPKLQKTWLYNYTTSIYNYDSSDWNSSRYRNDDTGFNIDAGLAADIGENWTLGLSG EECCCCCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCCCEECCCCEECCCCCEEEECCC QNLVSRDIDTKDIYITNGMTGETTNYKDTYQIRPLVTAGVAWHNDLLTVSADGDLTETKG CCHHHCCCCCCEEEEECCCCCCCCCCCCEEEEEEEEEECEEECCCEEEEECCCCCHHCCC FKSEDNSQYVGVGTEVRPLSWLAVRAGYRADVKNNDSNVVTGGLGFAPFNRVHLDLMGLY CCCCCCCEEEECCCCCCCCEEEEEECCCEECCCCCCCCEEECCCCCCCCCEEEEEEEEEC GEDETWGAGAQLTMTF CCCCCCCCCCEEEEEC >Mature Secondary Structure MNKNVKLSLIAIAVSLFMAKQASAANTWTEARNDAMGGTGVASANYGSGVLLNPALLAKA CCCCEEEHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCCCCCEEECHHHHCCC KPEDNITVVLPAVGVQITDKDNLQDEIDDISDKVDYYDEVVDNLTLGQILLNPRGVLNQF CCCCCEEEEEEECCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCEEEHEEECCHHHHHHH QGAARDLADELEYLNGKTARANAGAGLAVSIPGQTLSVAFIAKGYAHGRVSSSIDQNDIQ HHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCEEEEEEEECCCCCCCCCCCCCHHHHH YLRDIQHDERVALREAGRAALLGSDEITKHLNSTASGRVAIVSDYGIALAKQFVVGEVPV HHHHCCCCHHHHHHHCCCEEEECCHHHHHHHCCCCCCCEEEEECCCHHHHHHHHEECCCE SIGVTPKLQKTWLYNYTTSIYNYDSSDWNSSRYRNDDTGFNIDAGLAADIGENWTLGLSG EECCCCCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCCCEECCCCEECCCCCEEEECCC QNLVSRDIDTKDIYITNGMTGETTNYKDTYQIRPLVTAGVAWHNDLLTVSADGDLTETKG CCHHHCCCCCCEEEEECCCCCCCCCCCCEEEEEEEEEECEEECCCEEEEECCCCCHHCCC FKSEDNSQYVGVGTEVRPLSWLAVRAGYRADVKNNDSNVVTGGLGFAPFNRVHLDLMGLY CCCCCCCEEEECCCCCCCCEEEEEECCCEECCCCCCCCEEECCCCCCCCCEEEEEEEEEC GEDETWGAGAQLTMTF CCCCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA