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The map label for this gene is cbiQ [H]

Identifier: 194734568

GI number: 194734568

Start: 2081552

End: 2082229

Strand: Reverse

Name: cbiQ [H]

Synonym: SeSA_A2190

Alternate gene names: 194734568

Gene position: 2082229-2081552 (Counterclockwise)

Preceding gene: 194733948

Following gene: 194737966

Centisome position: 44.22

GC content: 54.13

Gene sequence:

>678_bases
ATGACCGGGCTTGATCGACTCAGCTATCAAAGCCGCTGGGCACACGTTGCGCCGCAGCGCAAGTTTTTGCTGTGGCTGGC
GATGATGATACTGGCGTTTGCTCTGCCGCCTGTAGGGCAGGGCATTGAGCTGCTGATCATTGCCGGATTGAGCTGTTGGC
TATTGCGCATATCCCTCTGGCGCTGGTGTCGATGGATGGCGATACCTTTTGGATTTTTGTTGGTCGGCGTGATAACGATT
ATCTTCAGCATCAGCCGCGAGCCGCAAATGCTGCTGGCTGGCATATCTGTCGGGCCATACTGGATCGGGATTACCCGTGC
GGGCGTGGTTACGGCGAATGAAACGTTCTGGCGTAGCCTGACGGCGCTGTCCGCGACGTTGTGGCTGGTGATGAACCTAC
CGTTTCCGCAGTTAATTAGCTTGCTTAAGCGCGCGCATATTCCACGCCTGCTTACCGAGCAAATCCTGTTAACGTGGCGC
TTTCTCTTTATTCTTCTGGATGAGGCGGCGGCAATTCGTCGCGCGCAAACGCTGCGTTTTGGTTATTGCAGCCTGCCGAA
CGGCTATCGATCTCTGGCAATGCTGACTGGACTCCTGTTTACGCGAGTGTTAATGCGTTATCAGCAAATGACCACCACGC
TGGATATCAAACTGTATCAGGGTGATTTTCACCTGTAA

Upstream 100 bases:

>100_bases
AGCGGTGAAATTGAAAGCCTGCTGTTTACCCTTCAGGGCTCTCTTGGCGCGGCGGTGATTTTTTATATCCTGGGGTATTG
CAAAGGTAAACAACGCCGTG

Downstream 100 bases:

>100_bases
GGACTATTATGCTTGCCACTTCAGACCTGTGGTTTCGTTATCAGGATGAGCCGGTACTTAAAGGGTTAAATCTGGATTTT
TCGCTTTCGCCTGTTACCGG

Product: cobalt ABC transporter permease CbiQ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 225; Mature: 224

Protein sequence:

>225_residues
MTGLDRLSYQSRWAHVAPQRKFLLWLAMMILAFALPPVGQGIELLIIAGLSCWLLRISLWRWCRWMAIPFGFLLVGVITI
IFSISREPQMLLAGISVGPYWIGITRAGVVTANETFWRSLTALSATLWLVMNLPFPQLISLLKRAHIPRLLTEQILLTWR
FLFILLDEAAAIRRAQTLRFGYCSLPNGYRSLAMLTGLLFTRVLMRYQQMTTTLDIKLYQGDFHL

Sequences:

>Translated_225_residues
MTGLDRLSYQSRWAHVAPQRKFLLWLAMMILAFALPPVGQGIELLIIAGLSCWLLRISLWRWCRWMAIPFGFLLVGVITI
IFSISREPQMLLAGISVGPYWIGITRAGVVTANETFWRSLTALSATLWLVMNLPFPQLISLLKRAHIPRLLTEQILLTWR
FLFILLDEAAAIRRAQTLRFGYCSLPNGYRSLAMLTGLLFTRVLMRYQQMTTTLDIKLYQGDFHL
>Mature_224_residues
TGLDRLSYQSRWAHVAPQRKFLLWLAMMILAFALPPVGQGIELLIIAGLSCWLLRISLWRWCRWMAIPFGFLLVGVITII
FSISREPQMLLAGISVGPYWIGITRAGVVTANETFWRSLTALSATLWLVMNLPFPQLISLLKRAHIPRLLTEQILLTWRF
LFILLDEAAAIRRAQTLRFGYCSLPNGYRSLAMLTGLLFTRVLMRYQQMTTTLDIKLYQGDFHL

Specific function: May be involved with cobalt transport in association with cobalamin biosynthesis [H]

COG id: COG0619

COG function: function code P; ABC-type cobalt transport system, permease component CbiQ and related transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CbiQ family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003339
- InterPro:   IPR012809 [H]

Pfam domain/function: PF02361 CbiQ [H]

EC number: NA

Molecular weight: Translated: 25859; Mature: 25727

Theoretical pI: Translated: 11.07; Mature: 11.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGLDRLSYQSRWAHVAPQRKFLLWLAMMILAFALPPVGQGIELLIIAGLSCWLLRISLW
CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
RWCRWMAIPFGFLLVGVITIIFSISREPQMLLAGISVGPYWIGITRAGVVTANETFWRSL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEECCCCCEEEEEEECCEEECCHHHHHHH
TALSATLWLVMNLPFPQLISLLKRAHIPRLLTEQILLTWRFLFILLDEAAAIRRAQTLRF
HHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GYCSLPNGYRSLAMLTGLLFTRVLMRYQQMTTTLDIKLYQGDFHL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCC
>Mature Secondary Structure 
TGLDRLSYQSRWAHVAPQRKFLLWLAMMILAFALPPVGQGIELLIIAGLSCWLLRISLW
CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
RWCRWMAIPFGFLLVGVITIIFSISREPQMLLAGISVGPYWIGITRAGVVTANETFWRSL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEECCCCCEEEEEEECCEEECCHHHHHHH
TALSATLWLVMNLPFPQLISLLKRAHIPRLLTEQILLTWRFLFILLDEAAAIRRAQTLRF
HHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GYCSLPNGYRSLAMLTGLLFTRVLMRYQQMTTTLDIKLYQGDFHL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8501034; 11677609 [H]