| Definition | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 chromosome, complete genome. |
|---|---|
| Accession | NC_011094 |
| Length | 4,709,075 |
Click here to switch to the map view.
The map label for this gene is fic [H]
Identifier: 194734211
GI number: 194734211
Start: 3518121
End: 3518723
Strand: Reverse
Name: fic [H]
Synonym: SeSA_A3667
Alternate gene names: 194734211
Gene position: 3518723-3518121 (Counterclockwise)
Preceding gene: 194734079
Following gene: 194737562
Centisome position: 74.72
GC content: 55.89
Gene sequence:
>603_bases ATGAGCGATAAATTTGGCGAAGGGCGCGATCCGTACCTCTATCCGGGGCTGAATGTGATGCGTAATCGGCTGGGGATTCA TCAGGCCCAGCGACTGGCGCAAGCGGCATATGAAATGACCGCGCTCCGTGCCGCCACGATTGAACTGGGGCCGCTGGTAC GCGGCTTGCCTCATCTGTGCGCGATTCATCGCCAGCTCTATCAGGATATTTTCGACTGGGCAGGGCAACTGCGGGAGGTC GATATTTACCAGGGCGATACCCGTTTCTGCCACTTTGCCTATATCGAAAAAGAGGGCAACGCTCTGATGCAGGATCTGGA AGAAGAGGGCTATCTGGTCGGTCTGGCGCACGAGAAGTTTGTCGAGCGGCTGGCGCATTACTACTGTGAAATTAACGTGC TTCATCCGTTTCGTTTGGGGAGCGGGCTGGCGCAGCGCATCTTCTTTGAACAGCTGGCGCTACATGCAGGCTACGCGCTG AGTTGGCAAGGTATTGCGGTTGAAACATGGAAGCAGGCGAACCAGAGCGGCGCGATGGGCGATCTCTCCGCTTTGCAGGC GATTTTTCAGAAAGCGATAAGCGAAGCTCGCGAAACTGAGTAA
Upstream 100 bases:
>100_bases AACTTCCAGCAAAGCCGCCGTCTCGAAGGTATTGAGATCCCCTTAGTAACCCTGACCGCCGATGAAGCGCTGGCACGTCT TGACGAGCTTCGGAGGCACT
Downstream 100 bases:
>100_bases AATAGTGCGGTTCTACTGACCCGGAGCCGCCATGATCCTGCTTATCGATAACTATGATTCCTTTACCTGGAACCTCTACC AGTATTTTTGTGAACTGGGC
Product: cell filamentation protein Fic
Products: NA
Alternate protein names: Cell filamentation protein fic [H]
Number of amino acids: Translated: 200; Mature: 199
Protein sequence:
>200_residues MSDKFGEGRDPYLYPGLNVMRNRLGIHQAQRLAQAAYEMTALRAATIELGPLVRGLPHLCAIHRQLYQDIFDWAGQLREV DIYQGDTRFCHFAYIEKEGNALMQDLEEEGYLVGLAHEKFVERLAHYYCEINVLHPFRLGSGLAQRIFFEQLALHAGYAL SWQGIAVETWKQANQSGAMGDLSALQAIFQKAISEARETE
Sequences:
>Translated_200_residues MSDKFGEGRDPYLYPGLNVMRNRLGIHQAQRLAQAAYEMTALRAATIELGPLVRGLPHLCAIHRQLYQDIFDWAGQLREV DIYQGDTRFCHFAYIEKEGNALMQDLEEEGYLVGLAHEKFVERLAHYYCEINVLHPFRLGSGLAQRIFFEQLALHAGYAL SWQGIAVETWKQANQSGAMGDLSALQAIFQKAISEARETE >Mature_199_residues SDKFGEGRDPYLYPGLNVMRNRLGIHQAQRLAQAAYEMTALRAATIELGPLVRGLPHLCAIHRQLYQDIFDWAGQLREVD IYQGDTRFCHFAYIEKEGNALMQDLEEEGYLVGLAHEKFVERLAHYYCEINVLHPFRLGSGLAQRIFFEQLALHAGYALS WQGIAVETWKQANQSGAMGDLSALQAIFQKAISEARETE
Specific function: Involved in cell filamentation induced by cyclic AMP [H]
COG id: COG2184
COG function: function code D; Protein involved in cell division
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 fido domain [H]
Homologues:
Organism=Escherichia coli, GI1789761, Length=200, Percent_Identity=87, Blast_Score=363, Evalue=1e-102,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003812 [H]
Pfam domain/function: PF02661 Fic [H]
EC number: NA
Molecular weight: Translated: 22719; Mature: 22588
Theoretical pI: Translated: 5.83; Mature: 5.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDKFGEGRDPYLYPGLNVMRNRLGIHQAQRLAQAAYEMTALRAATIELGPLVRGLPHLC CCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AIHRQLYQDIFDWAGQLREVDIYQGDTRFCHFAYIEKEGNALMQDLEEEGYLVGLAHEKF HHHHHHHHHHHHHHHHHEEEEEECCCCCEEEEEEEECCCHHHHHHHHHCCCEEEEHHHHH VERLAHYYCEINVLHPFRLGSGLAQRIFFEQLALHAGYALSWQGIAVETWKQANQSGAMG HHHHHHHHHHHCEECHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHCCCCCCCC DLSALQAIFQKAISEARETE HHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SDKFGEGRDPYLYPGLNVMRNRLGIHQAQRLAQAAYEMTALRAATIELGPLVRGLPHLC CCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AIHRQLYQDIFDWAGQLREVDIYQGDTRFCHFAYIEKEGNALMQDLEEEGYLVGLAHEKF HHHHHHHHHHHHHHHHHEEEEEECCCCCEEEEEEEECCCHHHHHHHHHCCCEEEEHHHHH VERLAHYYCEINVLHPFRLGSGLAQRIFFEQLALHAGYALSWQGIAVETWKQANQSGAMG HHHHHHHHHHHCEECHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHCCCCCCCC DLSALQAIFQKAISEARETE HHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2403545; 11677609 [H]