Click here to switch to the map view.

The map label for this gene is cptA

Identifier: 194734095

GI number: 194734095

Start: 4200499

End: 4202232

Strand: Reverse

Name: cptA

Synonym: SeSA_A4328

Alternate gene names: 194734095

Gene position: 4202232-4200499 (Counterclockwise)

Preceding gene: 194737003

Following gene: 194735694

Centisome position: 89.24

GC content: 52.54

Gene sequence:

>1734_bases
ATGCAATCCACATTACTCCAGACTAAACCCGCGTTTAGCTGGAAAGCCCTGGGCTGGGCACTGCTCTACTTTTGGTTCTT
TTCCACCCTCCTGCAGGCCATTATTTATCTCACCGGATACAGTGGGACAAACGGTCTGCGGGATTCGCTACTGTACAGCT
CACTGTGGCTGATCCCGGTCTTTCTGTTTCCAGGCCGCATCCGGGTTATTGCTGCCGTTATTGGCGTCGTACTTTGGGCC
GCCTCGCTGGCGGCGCTGAGCTATTACGTAATCTACGGGCAGGAGTTCTCGCAAAGCGTGCTGTTTGTGATGTTTGAAAC
CAACGCCAATGAAGCCAGCGAATATTTAAGCCAATATTTCAGTCTGAAAATTGTTCTTGTCGCCCTGGCTTATACGGTAG
CGGCGATTCTGCTGTGGACACGTCTGCGCCCGGTTTATATTCCATCGCCCTGGCGCTACCTGGTGTCGTTTGCCCTGCTG
TACGGGCTGATCCTCCATCCCATCGCGATGAATACCTTTATCAAGCATAAGTCGATGGAGAAAACGCTGGATAGCCTGGC
GTCACGAATGGAACCCGCCGCGCCGTGGCAATTTATTACTGGCTACTATCAGTACCGTTTACAGCTCGCTTCGCTGAATA
AACTGCTGAATGAAAACGATGCCCTGCCGCCGCTGGCTAACTTCCAGGACCACTCCGGCGATGCGCCGCGCACGCTGGTA
CTGGTGATTGGCGAATCGACCCAGCGTGGCCGTATGAGCCTGTACGGTTATCCGCGCGAAACCACGCCGGAACTGGACGC
GCTGCATAAAACCGACCCCGGGCTGACCGTGTTTAATAACGTGGTAACTTCGCGACCGTACACCATTGAGATTCTGCAAC
AGGCGCTAACATTCGCGGACGAAAAGAACCCGGACTGGTATCTGACGAAGCCATCGTTGATGAATATGATGAAACAGGCC
GGGTATAAAACCTTCTGGATCACTAACCAGCAGACGATGACGGCGCGTAATACCATGCTGACCGTGTTCTCTAAGCAGAC
TGATAAGCAGTTCTATATGAACCAGCAGCGCACTCAAAGCGCACGCGAATATGACAGCAACGTGCTGGCGCCGTTTAAAG
CGGTGTTAGCCGACCCGGCGCCGAAAAAATTCATTATTGTGCATCTGCTGGGAACGCACATTAAATACAAGTTCCGCTAT
CCAGAAAACCAGGGCAAGTTTGATGGTAAAACCGACCATGTTCCGCCGGGATTAAGCAGCGACGAACTGGAGTCGTATAA
CGATTACGACAACGCGAATCTGTATAACGACTATGTTGTCGCCAGCCTGATTAAGGACTATAAAGCGACCGATCCGAACG
GTTTCCTGCTCTACTTCTCCGATCACGGTGAAGAAGTGTATGACACGCCGCCGCATAAGACGCAGGGACGAAACGAAGAT
TCGCCAACCCGTCATATGTATACGGTGCCGTTCCTGCTGTGGACCTCAGAGAAATGGCAGGCGGCGCATCCGCGCGACTT
CTCACAGGATGTCGATCGTAAGTACAGCAGTTCCGAGCTTATCCATACCTGGTCGGACTTAGCGGGCCTGACCTATGATG
GTTACGACCCGACACGTTCCATCACCAACCCGCAGTTCAAAGAGACCACGCGCTGGATTGGCAACCCGTATAAGAAAAAC
GCGCTGATTGATTATGATACGTTGCCGTATGGCGATCAGGTCGGTAATCAATAG

Upstream 100 bases:

>100_bases
TCTTTCTTAGCAAAACGTGCGGCATAAAGCAGGTTTGCTTCAGATTCTTTTAAGGTTCAGGCGTTACGTTTGGCGCTACG
ATTAAAGACAGGCTCTCATT

Downstream 100 bases:

>100_bases
CCTGTATGCTGCCCGATAACGCTAACGCTTATCGGGCCTGGCGTGCTTCTCTCCCGTAGTCCGGATAAGGCGCAAAGCGC
CGCTATCCGGCAATAATCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 577; Mature: 577

Protein sequence:

>577_residues
MQSTLLQTKPAFSWKALGWALLYFWFFSTLLQAIIYLTGYSGTNGLRDSLLYSSLWLIPVFLFPGRIRVIAAVIGVVLWA
ASLAALSYYVIYGQEFSQSVLFVMFETNANEASEYLSQYFSLKIVLVALAYTVAAILLWTRLRPVYIPSPWRYLVSFALL
YGLILHPIAMNTFIKHKSMEKTLDSLASRMEPAAPWQFITGYYQYRLQLASLNKLLNENDALPPLANFQDHSGDAPRTLV
LVIGESTQRGRMSLYGYPRETTPELDALHKTDPGLTVFNNVVTSRPYTIEILQQALTFADEKNPDWYLTKPSLMNMMKQA
GYKTFWITNQQTMTARNTMLTVFSKQTDKQFYMNQQRTQSAREYDSNVLAPFKAVLADPAPKKFIIVHLLGTHIKYKFRY
PENQGKFDGKTDHVPPGLSSDELESYNDYDNANLYNDYVVASLIKDYKATDPNGFLLYFSDHGEEVYDTPPHKTQGRNED
SPTRHMYTVPFLLWTSEKWQAAHPRDFSQDVDRKYSSSELIHTWSDLAGLTYDGYDPTRSITNPQFKETTRWIGNPYKKN
ALIDYDTLPYGDQVGNQ

Sequences:

>Translated_577_residues
MQSTLLQTKPAFSWKALGWALLYFWFFSTLLQAIIYLTGYSGTNGLRDSLLYSSLWLIPVFLFPGRIRVIAAVIGVVLWA
ASLAALSYYVIYGQEFSQSVLFVMFETNANEASEYLSQYFSLKIVLVALAYTVAAILLWTRLRPVYIPSPWRYLVSFALL
YGLILHPIAMNTFIKHKSMEKTLDSLASRMEPAAPWQFITGYYQYRLQLASLNKLLNENDALPPLANFQDHSGDAPRTLV
LVIGESTQRGRMSLYGYPRETTPELDALHKTDPGLTVFNNVVTSRPYTIEILQQALTFADEKNPDWYLTKPSLMNMMKQA
GYKTFWITNQQTMTARNTMLTVFSKQTDKQFYMNQQRTQSAREYDSNVLAPFKAVLADPAPKKFIIVHLLGTHIKYKFRY
PENQGKFDGKTDHVPPGLSSDELESYNDYDNANLYNDYVVASLIKDYKATDPNGFLLYFSDHGEEVYDTPPHKTQGRNED
SPTRHMYTVPFLLWTSEKWQAAHPRDFSQDVDRKYSSSELIHTWSDLAGLTYDGYDPTRSITNPQFKETTRWIGNPYKKN
ALIDYDTLPYGDQVGNQ
>Mature_577_residues
MQSTLLQTKPAFSWKALGWALLYFWFFSTLLQAIIYLTGYSGTNGLRDSLLYSSLWLIPVFLFPGRIRVIAAVIGVVLWA
ASLAALSYYVIYGQEFSQSVLFVMFETNANEASEYLSQYFSLKIVLVALAYTVAAILLWTRLRPVYIPSPWRYLVSFALL
YGLILHPIAMNTFIKHKSMEKTLDSLASRMEPAAPWQFITGYYQYRLQLASLNKLLNENDALPPLANFQDHSGDAPRTLV
LVIGESTQRGRMSLYGYPRETTPELDALHKTDPGLTVFNNVVTSRPYTIEILQQALTFADEKNPDWYLTKPSLMNMMKQA
GYKTFWITNQQTMTARNTMLTVFSKQTDKQFYMNQQRTQSAREYDSNVLAPFKAVLADPAPKKFIIVHLLGTHIKYKFRY
PENQGKFDGKTDHVPPGLSSDELESYNDYDNANLYNDYVVASLIKDYKATDPNGFLLYFSDHGEEVYDTPPHKTQGRNED
SPTRHMYTVPFLLWTSEKWQAAHPRDFSQDVDRKYSSSELIHTWSDLAGLTYDGYDPTRSITNPQFKETTRWIGNPYKKN
ALIDYDTLPYGDQVGNQ

Specific function: Catalyzes the addition of a phosphoethanolamine moiety to the outer membrane lipopolysaccharide core

COG id: COG2194

COG function: function code R; Predicted membrane-associated, metal-dependent hydrolase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phosphoethanolamine transferase family. CptA subfamily

Homologues:

Organism=Escherichia coli, GI1790392, Length=577, Percent_Identity=89.0814558058925, Blast_Score=1087, Evalue=0.0,
Organism=Escherichia coli, GI87082223, Length=511, Percent_Identity=24.6575342465753, Blast_Score=106, Evalue=4e-24,
Organism=Escherichia coli, GI87082286, Length=474, Percent_Identity=22.9957805907173, Blast_Score=83, Evalue=6e-17,
Organism=Escherichia coli, GI1787035, Length=468, Percent_Identity=21.5811965811966, Blast_Score=72, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CPTA_SALTY (Q7CPC0)

Other databases:

- EMBL:   AE006468
- RefSeq:   NP_462998.1
- ProteinModelPortal:   Q7CPC0
- PRIDE:   Q7CPC0
- GeneID:   1255645
- GenomeReviews:   AE006468_GR
- KEGG:   stm:STM4118
- HOGENOM:   HBG336973
- OMA:   RNTMLTT
- ProtClustDB:   PRK10649
- BioCyc:   STYP99287:STM4118-MONOMER
- InterPro:   IPR017849
- InterPro:   IPR017850
- InterPro:   IPR000917
- Gene3D:   G3DSA:3.40.720.10

Pfam domain/function: PF00884 Sulfatase; SSF53649 Alkaline_phosphatase_core

EC number: NA

Molecular weight: Translated: 66208; Mature: 66208

Theoretical pI: Translated: 7.18; Mature: 7.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x2319a808)-; HASH(0x236240dc)-; HASH(0x2288cabc)-; HASH(0x23489808)-; HASH(0x23501a04)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSTLLQTKPAFSWKALGWALLYFWFFSTLLQAIIYLTGYSGTNGLRDSLLYSSLWLIPV
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
FLFPGRIRVIAAVIGVVLWAASLAALSYYVIYGQEFSQSVLFVMFETNANEASEYLSQYF
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCEEEEEEECCCHHHHHHHHHHH
SLKIVLVALAYTVAAILLWTRLRPVYIPSPWRYLVSFALLYGLILHPIAMNTFIKHKSME
HHHHHHHHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KTLDSLASRMEPAAPWQFITGYYQYRLQLASLNKLLNENDALPPLANFQDHSGDAPRTLV
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEE
LVIGESTQRGRMSLYGYPRETTPELDALHKTDPGLTVFNNVVTSRPYTIEILQQALTFAD
EEECCCCCCCCEEEECCCCCCCCHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHC
EKNPDWYLTKPSLMNMMKQAGYKTFWITNQQTMTARNTMLTVFSKQTDKQFYMNQQRTQS
CCCCCEEEECHHHHHHHHHCCCEEEEEECCCHHHHHHHEEEEECCCCCHHHHHHHHHHHH
AREYDSNVLAPFKAVLADPAPKKFIIVHLLGTHIKYKFRYPENQGKFDGKTDHVPPGLSS
HHHHCCCHHHHHHHHHCCCCCCCEEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCH
DELESYNDYDNANLYNDYVVASLIKDYKATDPNGFLLYFSDHGEEVYDTPPHKTQGRNED
HHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCC
SPTRHMYTVPFLLWTSEKWQAAHPRDFSQDVDRKYSSSELIHTWSDLAGLTYDGYDPTRS
CCCCEEEEEEEEEEECCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHCCCEECCCCCCCC
ITNPQFKETTRWIGNPYKKNALIDYDTLPYGDQVGNQ
CCCCCHHHHHHHHCCCCCCCCEEECCCCCCCHHCCCH
>Mature Secondary Structure
MQSTLLQTKPAFSWKALGWALLYFWFFSTLLQAIIYLTGYSGTNGLRDSLLYSSLWLIPV
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
FLFPGRIRVIAAVIGVVLWAASLAALSYYVIYGQEFSQSVLFVMFETNANEASEYLSQYF
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCEEEEEEECCCHHHHHHHHHHH
SLKIVLVALAYTVAAILLWTRLRPVYIPSPWRYLVSFALLYGLILHPIAMNTFIKHKSME
HHHHHHHHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KTLDSLASRMEPAAPWQFITGYYQYRLQLASLNKLLNENDALPPLANFQDHSGDAPRTLV
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEE
LVIGESTQRGRMSLYGYPRETTPELDALHKTDPGLTVFNNVVTSRPYTIEILQQALTFAD
EEECCCCCCCCEEEECCCCCCCCHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHC
EKNPDWYLTKPSLMNMMKQAGYKTFWITNQQTMTARNTMLTVFSKQTDKQFYMNQQRTQS
CCCCCEEEECHHHHHHHHHCCCEEEEEECCCHHHHHHHEEEEECCCCCHHHHHHHHHHHH
AREYDSNVLAPFKAVLADPAPKKFIIVHLLGTHIKYKFRYPENQGKFDGKTDHVPPGLSS
HHHHCCCHHHHHHHHHCCCCCCCEEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCH
DELESYNDYDNANLYNDYVVASLIKDYKATDPNGFLLYFSDHGEEVYDTPPHKTQGRNED
HHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCC
SPTRHMYTVPFLLWTSEKWQAAHPRDFSQDVDRKYSSSELIHTWSDLAGLTYDGYDPTRS
CCCCEEEEEEEEEEECCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHCCCEECCCCCCCC
ITNPQFKETTRWIGNPYKKNALIDYDTLPYGDQVGNQ
CCCCCHHHHHHHHCCCCCCCCEEECCCCCCCHHCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11677609