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The map label for this gene is ybaP [H]

Identifier: 194733915

GI number: 194733915

Start: 564323

End: 565117

Strand: Reverse

Name: ybaP [H]

Synonym: SeSA_A0560

Alternate gene names: 194733915

Gene position: 565117-564323 (Counterclockwise)

Preceding gene: 194734675

Following gene: 194735308

Centisome position: 12.0

GC content: 56.86

Gene sequence:

>795_bases
ATGGAGCTATTAAATCAACTTAAACGTTTATGGCGCGCGCTGCGTGGTACCTCAAATAGTTGGCCTGCTATCGATCTCTC
CCTGCCCGGCGGTCGTCATCTGCATCTGGTTGGCAGTATTCATATGGGGACGCGCGATATGGCTCCTCTTCCAGCAAAGC
TGGTGAAAAAGCTACGCCAGGCCGACGCGCTGGTCGTTGAAGCGGATATTTCCGGTAACGAAACGCCATTCAGCAATCTC
CCCAAATGTCCGCCGTTGGTCGAACGTCTCAGCGCCGGGCAGCTAAGCGCACTGGAAAAACGGGTCAGCGAGTTGGGTAT
GCCGCTGATCCATTTTGATAATCAACCTTTATGGCAGATAGCTATGGTGCTACAGGCCACGCAGGCGCAACGGCTGGGAT
TGCGTCCGGACTATGGCATTGATTATCAGCTATTACAGGCTGCCCGCGAAGTGTCGCTGCCGGTGCAAGAGCTGGAAGGG
GCGAAACACCAGCTCGAACTACTATGCGATCTGCCCGATGGCGGGATGGCGCTGCTCGACGACACGCTGACGCACTGGCA
CACCAACGCACGGCTTTTGCAGGTGATGATCGGCTGGTGGCTTGAACAGCCGCCGACCAGCGTCGGCGCTTCGCTCCCCA
GAACGTTTAGCCAACCGCTGTATGATGTACTGATGGTGAAACGCAATGAAGCCTGGCGCGACGCGCTGCTGGCACTGCCG
CCGGGACGCTACGTGGTAGCCGTAGGGGCGCTACATCTGTACGGCGAAGGCAACCTACCGCAAATATTGAAATAA

Upstream 100 bases:

>100_bases
GACGGCAGCGAACTACCCGACTGATCGTTGACCTCCAGTCAGGGCGCATTGCGCCCTTTTCTCCAACGCGCTAGCATGAG
CTTTTTCAAAGGGAGCGCGT

Downstream 100 bases:

>100_bases
AAAAATGGCCAATATCGCTATTGGCCCGTCAAAGAGGAATTTCATCGTTATTATTATCCCGACGCTTTCGCTTCGGATCT
TCAGATTGTCGCTCAAAGTT

Product: GumN family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MELLNQLKRLWRALRGTSNSWPAIDLSLPGGRHLHLVGSIHMGTRDMAPLPAKLVKKLRQADALVVEADISGNETPFSNL
PKCPPLVERLSAGQLSALEKRVSELGMPLIHFDNQPLWQIAMVLQATQAQRLGLRPDYGIDYQLLQAAREVSLPVQELEG
AKHQLELLCDLPDGGMALLDDTLTHWHTNARLLQVMIGWWLEQPPTSVGASLPRTFSQPLYDVLMVKRNEAWRDALLALP
PGRYVVAVGALHLYGEGNLPQILK

Sequences:

>Translated_264_residues
MELLNQLKRLWRALRGTSNSWPAIDLSLPGGRHLHLVGSIHMGTRDMAPLPAKLVKKLRQADALVVEADISGNETPFSNL
PKCPPLVERLSAGQLSALEKRVSELGMPLIHFDNQPLWQIAMVLQATQAQRLGLRPDYGIDYQLLQAAREVSLPVQELEG
AKHQLELLCDLPDGGMALLDDTLTHWHTNARLLQVMIGWWLEQPPTSVGASLPRTFSQPLYDVLMVKRNEAWRDALLALP
PGRYVVAVGALHLYGEGNLPQILK
>Mature_264_residues
MELLNQLKRLWRALRGTSNSWPAIDLSLPGGRHLHLVGSIHMGTRDMAPLPAKLVKKLRQADALVVEADISGNETPFSNL
PKCPPLVERLSAGQLSALEKRVSELGMPLIHFDNQPLWQIAMVLQATQAQRLGLRPDYGIDYQLLQAAREVSLPVQELEG
AKHQLELLCDLPDGGMALLDDTLTHWHTNARLLQVMIGWWLEQPPTSVGASLPRTFSQPLYDVLMVKRNEAWRDALLALP
PGRYVVAVGALHLYGEGNLPQILK

Specific function: Unknown

COG id: COG3735

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786689, Length=264, Percent_Identity=66.2878787878788, Blast_Score=364, Evalue=1e-102,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010891 [H]

Pfam domain/function: PF07446 GumN [H]

EC number: NA

Molecular weight: Translated: 29349; Mature: 29349

Theoretical pI: Translated: 7.27; Mature: 7.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELLNQLKRLWRALRGTSNSWPAIDLSLPGGRHLHLVGSIHMGTRDMAPLPAKLVKKLRQ
CHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHH
ADALVVEADISGNETPFSNLPKCPPLVERLSAGQLSALEKRVSELGMPLIHFDNQPLWQI
CCCEEEEECCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHCCCEEEECCCHHHHH
AMVLQATQAQRLGLRPDYGIDYQLLQAAREVSLPVQELEGAKHQLELLCDLPDGGMALLD
HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCHHHHCCCHHEEEEEEECCCCCHHHHH
DTLTHWHTNARLLQVMIGWWLEQPPTSVGASLPRTFSQPLYDVLMVKRNEAWRDALLALP
HHHHHHCCHHHHHHHHHHHHHCCCCHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCC
PGRYVVAVGALHLYGEGNLPQILK
CCCEEEEEEEEEEECCCCCHHHCC
>Mature Secondary Structure
MELLNQLKRLWRALRGTSNSWPAIDLSLPGGRHLHLVGSIHMGTRDMAPLPAKLVKKLRQ
CHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHH
ADALVVEADISGNETPFSNLPKCPPLVERLSAGQLSALEKRVSELGMPLIHFDNQPLWQI
CCCEEEEECCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHCCCEEEECCCHHHHH
AMVLQATQAQRLGLRPDYGIDYQLLQAAREVSLPVQELEGAKHQLELLCDLPDGGMALLD
HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCHHHHCCCHHEEEEEEECCCCCHHHHH
DTLTHWHTNARLLQVMIGWWLEQPPTSVGASLPRTFSQPLYDVLMVKRNEAWRDALLALP
HHHHHHCCHHHHHHHHHHHHHCCCCHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCC
PGRYVVAVGALHLYGEGNLPQILK
CCCEEEEEEEEEEECCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]