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The map label for this gene is rne

Identifier: 194445751

GI number:

Start: 1270138

End: 1273344

Strand: Reverse

Name: rne

Synonym: SNSL254_A1282

Alternate gene names: NA

Gene position: NA

Preceding gene: 194443343

Following gene: 194445224

Centisome position: NA

GC content: NA

Gene sequence:

>3207_bases
ATGAAAAGAATGTTAATCAACGCGACTCAGCAGGAAGAGTTGCGCGTCGCCCTTGTAGATGGGCAGCGTCTGTACGATCT
GGATATAGAAAGCCCCGGACACGAGCAGAAAAAAGCGAACATCTATAAAGGCAAAATTACCCGTATTGAACCGAGCCTGG
AAGCGGCTTTTGTTGATTACGGCGCAGAACGCCACGGTTTCCTCCCGTTAAAAGAAATTGCCCGCGAATATTTCCCCGCT
AACTACAGCGCTCATGGTCGCCCGAACATTAAAGACGTGTTACGCGAAGGCCAGGAAGTCATTGTTCAAATCGATAAAGA
AGAGCGCGGCAACAAAGGCGCGGCGTTAACCACCTTTATCAGTCTGGCGGGCAGCTACCTGGTACTGATGCCGAATAACC
CGCGCGCGGGTGGTATTTCCCGTCGCATTGAAGGCGACGATCGTACCGAGTTAAAAGAAGCGTTGGCCAGCCTGGAACTT
CCTGAAGGGATGGGGCTTATCGTGCGTACCGCGGGCGTGGGTAAATCCGCCGAAGCGTTGCAGTGGGATTTAAGCTTCCG
CCTGAAACACTGGGAGGCCATTCAGAAAGCCGCTGAAAGCCGTCCCGCGCCGTTCCTGATCCATCAGGAAAGCAACGTCA
TCGTACGCGCGTTTCGCGACTATCTGCGTCAGGATATCGGTGAAATCCTGATCGACAATCCAAAAGTGATGGAAATGGCG
CGTCAGCATATCGCCGCGTTGGGCCGCCCGGATTTTAGCAGCAAAATTAAGCTGTACACCGGTGAAATCCCGTTGTTCAG
CCATTACCAGATCGAATCGCAGATCGAGTCAGCGTTCCAGCGTGAAGTGCGCCTGCCCTCCGGCGGCTCCATCGTCATTG
ACAGTACCGAAGCGTTAACCGCCATCGATATCAACTCCGCCCGCGCGACTCGCGGCGGCGATATCGAAGAAACCGCGTTC
AACACCAATCTCGAAGCGGCCGACGAGATTGCCCGCCAGTTGCGTCTGCGCGACCTGGGCGGCCTGATCGTTATCGACTT
TATCGATATGACGCCGGTACGTCACCAGCGCGCGGTAGAAAACCGTCTGCGTGAAGCGGTGCGTCAGGACCGGGCGCGTA
TTCAGATTAGCCATATTTCCCGCTTCGGCCTGCTCGAAATGTCGCGTCAGCGCCTGAGCCCGTCTCTGGGCGAATCCAGC
CATCACGTGTGTCCGCGCTGTAGCGGTACCGGCACCGTGCGCGATAACGAATCTCTGTCGCTGTCCATTCTGCGCCTGAT
TGAAGAAGAAGCGCTGAAAGAGAATACGCAGGAAGTCCATGCCATTGTTCCGGTGCCGATCGCCTCTTATCTGCTTAACG
AAAAACGGACGGCAGTGAACGCTATTGAGACGCGTCAGGATGGCGTCCGCTGTGTCATCGTCCCGAACGATCAGATGGAA
ACGCCGCACTATTCCGTGCTGCGCGTACGCAAAGGGGAAGAAACGCCGACCCTGAGCTACATGCTGCCGAAGCTGCACGA
AGAAGCGATGGCGCTGCCTTCTGAAGAAGAGTACGCCGAGCGTAAACGCCCGGAACAGCCTGCGCTGGCGACATTCGCTA
TGCCAGATGTGCCTCCGGCGCCGACGCCTGTCGAACCGGCGGTTAGCGTCGCCACGGCGAAAAAGGATAATGTTGCCGCC
GCGCAGCCTGCCCAGCCGGGTCTGTTTAGCCGCTTCCTTAACGCGCTGAAACAACTGTTCAGCGGTGAAGAAACGAAAGC
CGTCGAAACAGCCGCGCCGAAAGCGGAAGAAAAAGCGGAGCGTCAGCAGGATCGTCGCAAGCCACGGCAGAACAACCGTC
GCGATCGTAACGAACGCCGCGACACCCGTGATAACCGTGCCGGACGTGACGGCGGCGAGAGCCGCGACGATAATCGTCGT
AACCGTCGCCAGACGCAGCAGCAAAATGCGGAAGCGCGCGATACCCGCCAGCAGGAAACGGCGGAAAAAGTGAAAACCGG
CGATGAACAGCAACAGACGCCGCGTCGCGAACGCAGCCGCCGCCGCAATGATGACAAGCGCCAGGCGCAGCAGGAAGTAA
AAGCGCTTAACCGCGAAGAACAGCCTGTCCAGGAGACCGAGCAGGAAGAACGCGTTCAGCAGGTTCAGCCGCGCCGCAAG
CAGCGTCAGCTTAATCAGAAAGTCCGCTTTACCAACAGCGCAGTGGTTGAAACGGTTGACACGCCGGTCGTCGTCGACGA
ACCACGCCCGGTTGAAAACGTTGAACAGCCCGTTCCAGCGCCGCGTACCGAGCTGGCGAAAGTTGATTTACCTGTCGTTG
CCGATATCACGCCGGAGCAGGATGATAGCGTAGAACCTCGCGATAATACCGGTATGCCGCGTCGCTCCCGCCGTTCTCCG
CGCCACCTGCGCGTAAGCGGTCAGCGTCGCCGTCGCTATCGTGACGAGCGCTACCCGACACAATCGCCGATGCCGTTAAC
CGTCGCCTGCGCGTCGCCGGAAATGGCGTCCGGTAAAGTCTGGATCCGCTACCCGATTGTCCGTCCTCAGGAAACGCAGG
TTGTTGAAGAGCAGCGTGAAGCAGATCTGGCGCTGCCACAACCGGTTGTCGCTGAACAGCAGGTTATCGCTGCGACCGTA
GCGCTCGAACCACAAGCGTCAGTACAGGCGGTAGAAAACGTTGCCGTTGAGCCGCAAACCGTCGCCGAACCACAGACGTC
GGAAGTCGTCGAGGTCGAGACAACGCATCCGGAAGTGATTGCCGCGCCGGTTGATGAACAGCCGCAACTGATTGCCGAAA
GCGATACGCCGGTGGCGCAAGAGGTTATTGCTGACGCCGAACCGGTAGCAGAAACCGCCGACGCGTCCATTACGGTGGCT
GAAAACGTAGCTGATGTTGTCGTTGTCGAGCCAGAAGAAGAGACAAAAGCGGAAGCGGCTGTTGTGGAGCACACGACAGA
AGAAACCGTTATCGCACCGGCCCAGGTGGTGGAAAAGCCGCAGGACGTTGTCTGCGTTGACGACGATCATAACCACGCCA
GCGCGCCGATGACGCGTGCGCCAGCGCCGGAATATGTGCCGGAAACCCCGCACCATAGCGACTGGCAGCGCCCTTCCTTC
CACTTTGAAGGTAAAGGCGCGGCAGGCGGACACAGCGCCACACGTCACGCCAGCGCCCCGGCGACACGCCCACAGCCGGT
AGAATGA

Upstream 100 bases:

>100_bases
TGGCGACGCGAAATAGTCACGAGGCCATCGGTTCATGCCCGGTAAGGCGTCACCATGCCCGCAGCTTAGTCGTCAACGTA
AGAATAATGAGTAAGTTACG

Downstream 100 bases:

>100_bases
TGTAAATGTGATACAAAGCCGACCGCCAGGTCGGCTTTTTTATGCCCCTTACAGGGCGATGCCTCACCCCATGGCGTCTT
TTAGTCACTCCAGGCGTTTA

Product: ribonuclease E

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1068_residues
MKRMLINATQQEELRVALVDGQRLYDLDIESPGHEQKKANIYKGKITRIEPSLEAAFVDYGAERHGFLPLKEIAREYFPA
NYSAHGRPNIKDVLREGQEVIVQIDKEERGNKGAALTTFISLAGSYLVLMPNNPRAGGISRRIEGDDRTELKEALASLEL
PEGMGLIVRTAGVGKSAEALQWDLSFRLKHWEAIQKAAESRPAPFLIHQESNVIVRAFRDYLRQDIGEILIDNPKVMEMA
RQHIAALGRPDFSSKIKLYTGEIPLFSHYQIESQIESAFQREVRLPSGGSIVIDSTEALTAIDINSARATRGGDIEETAF
NTNLEAADEIARQLRLRDLGGLIVIDFIDMTPVRHQRAVENRLREAVRQDRARIQISHISRFGLLEMSRQRLSPSLGESS
HHVCPRCSGTGTVRDNESLSLSILRLIEEEALKENTQEVHAIVPVPIASYLLNEKRTAVNAIETRQDGVRCVIVPNDQME
TPHYSVLRVRKGEETPTLSYMLPKLHEEAMALPSEEEYAERKRPEQPALATFAMPDVPPAPTPVEPAVSVATAKKDNVAA
AQPAQPGLFSRFLNALKQLFSGEETKAVETAAPKAEEKAERQQDRRKPRQNNRRDRNERRDTRDNRAGRDGGESRDDNRR
NRRQTQQQNAEARDTRQQETAEKVKTGDEQQQTPRRERSRRRNDDKRQAQQEVKALNREEQPVQETEQEERVQQVQPRRK
QRQLNQKVRFTNSAVVETVDTPVVVDEPRPVENVEQPVPAPRTELAKVDLPVVADITPEQDDSVEPRDNTGMPRRSRRSP
RHLRVSGQRRRRYRDERYPTQSPMPLTVACASPEMASGKVWIRYPIVRPQETQVVEEQREADLALPQPVVAEQQVIAATV
ALEPQASVQAVENVAVEPQTVAEPQTSEVVEVETTHPEVIAAPVDEQPQLIAESDTPVAQEVIADAEPVAETADASITVA
ENVADVVVVEPEEETKAEAAVVEHTTEETVIAPAQVVEKPQDVVCVDDDHNHASAPMTRAPAPEYVPETPHHSDWQRPSF
HFEGKGAAGGHSATRHASAPATRPQPVE

Sequences:
NA

Specific function: NA

COG id: COG1530

COG function: function code J; Ribonucleases G and E

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA